DY271370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 7.857e-28 Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 2 Query: 74 ATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRMLGR 604 A A A+ +P KLF W D++ +D S YI V T + HT GR++ K+F+K++ IVERL N LM N GKK +A IV A E++H TD+NPIQV+V AV NS PRE+ R+ G+ +AVD++P RRV+ A+ L G +F+ T L + Sbjct: 9 ADADAAEESEPETAR--AKLFGEWDITDIEYSDPSTERYITV------TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQ 177
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 7.857e-28 Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 125 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRN 574 + LF +W DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N LM GRN GKK A +I+K A +II++ T +NP+QV VDAV+N PRE+ TR+ G+ +VD+ P RR++ AI + GAR +F N Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLKPM----LLPHTEGKYQNRKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYPVSVDVGPTRRLDLAIRWIAEGARACSFNN 185
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.750e-27 Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 122 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 ++K+F RW+ EDV VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ KK+ A +VK A II T QNPIQV++ A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN TY + L Sbjct: 14 ELKVFGRWSVEDVTVNDPSLRPYIALEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDVALKNIALGASIKCYRNKTTYAQAL 184
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.899e-27 Identity = 63/156 (40.38%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 131 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 LFNRW +V + D ++ Y+ + ++ VPH+ GR + + F KA IVERL N LM N GKK +A+RIV+ A EI+H T +NPI+V+ DAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ L+ G ++ + K L Sbjct: 12 LFNRWDTSEVTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANAL 163
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_ARCFU (30S ribosomal protein S7P OS=Archaeoglobus fulgidus GN=rps7p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.899e-27 Identity = 66/159 (41.51%), Postives = 100/159 (62.89%), Query Frame = 2 Query: 122 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 ++ +F ++ +VQ++D +L YI ++ YVPH GR++ F K + IVERL N +M G N GKK++A IVK A EII T +NPIQV+VDA+IN+GPRE+ R+ G+ +AVD S RRV+ A+ + GAR +AF++ ++ + L Sbjct: 9 ELLVFGKYDPSEVQISDPALESYICLEPK----YVPHNHGRHANVPFAKQKVFIVERLINKVMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPREEVVRLKYGGIAVPKAVDTSSSRRVDIALRNIAEGARRAAFKSKRSIAQCL 163
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.651e-27 Identity = 59/157 (37.58%), Postives = 101/157 (64.33%), Query Frame = 2 Query: 128 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 KLF +W +V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++M + +N GKK +A+RIV A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+ +AVD +P RRV+ A+ + G+ ++AF++ ++ L Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNLDPV----IVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECL 155
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_THEON (30S ribosomal protein S7P OS=Thermococcus onnurineus (strain NA1) GN=rps7p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.687e-27 Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 122 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 ++K+ RW+ EDV VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ GKK+ A +VK A II T QNPIQV + A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN +Y + L Sbjct: 14 ELKVMGRWSVEDVVVNDPSLRPYINLEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASSHKVGGHFMRREHRSLMGKKMKAYEVVKEAFMIIERRTKQNPIQVFIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQAL 184
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_PYRKO (30S ribosomal protein S7P OS=Pyrococcus kodakaraensis GN=rps7p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26 Identity = 72/175 (41.14%), Postives = 95/175 (54.29%), Query Frame = 2 Query: 122 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 +VK+ RW+ EDV V D SL YI + A +PH+ GRY+ K F KA IVERL N +M G ++ KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ +VD+SPLRR++ A+ + GA +RN TY + L Sbjct: 14 EVKVMGRWSVEDVTVEDPSLKPYINLDAR----ILPHSHGRYAKKPFGKANVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVKAIENSAPREDTTTIAFGGIRYHMSVDVSPLRRLDIALKNIALGASIKCYRNKTTYAQAL 184
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_THECE (30S ribosomal protein S7P OS=Thermococcus celer GN=rps7p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.482e-26 Identity = 71/175 (40.57%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 122 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRNIKTYCRML 598 ++K+ RW+ EDV VND SL YI ++A +PH+ GR++ K F KA IVERL N +M G + KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN +Y + L Sbjct: 14 ELKVMGRWSVEDVTVNDPSLRPYINLEAR----LLPHSHGRHAKKAFGKANVHIVERLINKVMRSGATSHKAGGHFMRRDDRSLMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQAL 184
BLAST of DY271370 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.935e-26 Identity = 57/150 (38.00%), Postives = 99/150 (66.00%), Query Frame = 2 Query: 125 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNPAIYLLPTGARESAFRN 574 +K+F +W +V++ D+S+ YI ++ V HT GR++ ++F+K++ +VERL N +M +N G+K +A RIV+ A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ L+ GA +++F++ Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKS 146 The following BLAST results are available for this feature:
BLAST of DY271370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271370 ID=DY271370; Name=DY271370; organism=Citrus clementina; type=EST; length=842bpback to top |