DY271386

Overview
NameDY271386
Unique NameDY271386
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_LACLC (Chaperone protein dnaJ OS=Lactococcus lactis subsp. cremoris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.960e-19
Identity = 74/277 (26.71%), Postives = 110/277 (39.71%), Query Frame = 1
Query:  106 NNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGA-GAHDPFD-----------IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRGXXXXXXXXXXXXXXXXGMPKWQKDYLPWWSKRNAGYSPWKTNYFVLSRRDIQSSRKREKN 891
            NNT YYE LGV KNAS +++KKAY+K + K HPD   + G  +K+KE+ +AYE LSD +KR  YDQYGE     G GGG  G    F                                    +D+ + + +  E+   G  K++  +R  +                     G   ++++    P    Q Q  C+ C GTG+ +  KE+   C G                G+   QK  L           P+   Y V     +++S K E++
Sbjct:    2 NNTEYYERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEDKYKEVQEAYETLSDEQKRAAYDQYGEAGRNGGFGGGGFGGASGFSGFGGRSGGFGGFEDIFSSFFGGGGAQVNPNAPRQGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGRGQINVVRDTPLGRMQTQTTCDVCHGTGKEI--KEKSTTCHGSGHEKVAHTVKVTVPAGVETGQKMRLQGQGDAGVNGGPYGDLYVVF---QVEASDKFERD 273          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_IDILO (Chaperone protein dnaJ OS=Idiomarina loihiensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.960e-19
Identity = 45/78 (57.69%), Postives = 62/78 (79.49%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 339
            +Y++LGVSK+A+  D+KKAYK+ A+K HPD+  GD +   KFKE+ QAYEVLSDP+KR++YDQYG +A ++   GGAG
Sbjct:    6 FYQVLGVSKDANERDIKKAYKRMAMKYHPDRTEGDKDMEIKFKEIKQAYEVLSDPQKRQMYDQYGHEAFEQARQGGAG 83          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_FUSNP (Chaperone protein dnaJ OS=Fusobacterium nucleatum subsp. polymorphum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.960e-19
Identity = 70/222 (31.53%), Postives = 98/222 (44.14%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD---------PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE---GMGGG--AGAHDPFDI----------XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            YYE+LGV KNAS  D+KKAY+KAA+K HPDK  +          EKFKE+ +AY+VLSD EK++ YDQ+G  A ++   G GGG  AG  D  DI                                  D+ + L+++LE+   G  K +   R                        G G  +  +      + Q Q  C +C GTG+    +++C  CRG
Sbjct:    6 YYEVLGVDKNASENDIKKAYRKAAMKYHPDKFANATDAEKKDAEEKFKEINEAYQVLSDNEKKQQYDQFGHAAFEQGGAGFGGGFNAGGFDFGDIFGDNIFGGGGGFGGFEGFSGFGGSSRRSYVEPGNDLRYNLEITLEEAAKGVEKTIKYKRTGKCEHCHGTGAEDDKMKTCPTCNGQG-TIKTQQRTILGVMQSQSVCPDCHGTGKV--PEKKCKHCRG 224          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_COLP3 (Chaperone protein dnaJ OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.960e-19
Identity = 70/212 (33.02%), Postives = 96/212 (45.28%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEK---FKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAGAHD---PFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETLNDKERCPQCRG 711
            YYE LGVS++AS +++KKAYKK A+K HPD+  GD  K   FKE+ +AYE+L+D +KR  YDQYG  A ++ G GGG G H      D                         D+ + + +SLED   G S ++ +   V                     +GT  K      G   +Q       +Q  C  C G G+ + DK  C  CRG
Sbjct:    6 YYETLGVSQDASEKEVKKAYKKLAMKYHPDRTQGDKSKEETFKEVKEAYEILNDDQKRAAYDQYGHAAFEQGGNGGGGGGHGGGFGQDFGDIFGDIFGGGGGGRGRQRQQRGSDLRYNVDLSLEDAVKGKSLEIKVPTYV----------SCEPCDGSGAKKGTSAKTCSTCHGHGQVQMRQGLFAVQQTCPTCSGKGKVIADK--CTSCRG 205          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 1
Query:  112 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE-----GMGGGAGA 342
            T+ Y++LGVS +A+ ++LKK Y+KAA+K HPDK  GD EKFKE+++A+E+L+DP+KREIYDQYG +A +      G GG  GA
Sbjct:    5 TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSGGPSFGPGGPGGA 87          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAH 345
            YY++LGV +NAS ED+KKAY+K A+K HPDK  D +     +FKE+A+AYEVLSD +KR+IYD+YG++ L    GGG G+H
Sbjct:    4 YYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGL---TGGGGGSH 81          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBCM (Chaperone protein dnaJ OS=Vibrio cholerae serotype O1 (strain M66-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 65/214 (30.37%), Postives = 97/214 (45.33%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG------GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETLNDKERCPQCRG 711
            +YE+LGV ++AS  D+KKAYK+ A+K HPD+     G  EKFKE+ +AYE+L+D +K+  YDQYG  A ++G GG      G G  D  DI                        D+ + +++SLE+   G SK++ +   V                     +GT  +      G   +Q       +Q  C  C G G+ +  K+ C  C G
Sbjct:    6 FYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLV----------HCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKII--KDPCNVCHG 207          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBCH (Chaperone protein dnaJ OS=Vibrio cholerae GN=dnaJ PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 65/214 (30.37%), Postives = 97/214 (45.33%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG------GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETLNDKERCPQCRG 711
            +YE+LGV ++AS  D+KKAYK+ A+K HPD+     G  EKFKE+ +AYE+L+D +K+  YDQYG  A ++G GG      G G  D  DI                        D+ + +++SLE+   G SK++ +   V                     +GT  +      G   +Q       +Q  C  C G G+ +  K+ C  C G
Sbjct:    6 FYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLV----------HCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKII--KDPCNVCHG 207          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBC3 (Chaperone protein dnaJ OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 65/214 (30.37%), Postives = 97/214 (45.33%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG------GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETLNDKERCPQCRG 711
            +YE+LGV ++AS  D+KKAYK+ A+K HPD+     G  EKFKE+ +AYE+L+D +K+  YDQYG  A ++G GG      G G  D  DI                        D+ + +++SLE+   G SK++ +   V                     +GT  +      G   +Q       +Q  C  C G G+ +  K+ C  C G
Sbjct:    6 FYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLV----------HCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKII--KDPCNVCHG 207          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 62/211 (29.38%), Postives = 94/211 (44.55%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA----------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            YYE+LG+SK+ASA+++KKAY+K + + HPD   + G  EKFKE+++AYEVLSD +KR  YDQYG     +G GGGAG            D FD                         D+ + +++  ++   G   ++ + R                        G    +++    P      +  C  C GTG+ +  KE+C  C G
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFD------TFFGGGGRQQDPNAPRQGSDLQYTMRLKFKEAVFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEI--KEKCSTCHG 208          
The following BLAST results are available for this feature:
BLAST of DY271386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LACLC4.960e-1926.71Chaperone protein dnaJ OS=Lactococcus lactis subsp... [more]
DNAJ_IDILO4.960e-1957.69Chaperone protein dnaJ OS=Idiomarina loihiensis GN... [more]
DNAJ_FUSNP4.960e-1931.53Chaperone protein dnaJ OS=Fusobacterium nucleatum ... [more]
DNAJ_COLP34.960e-1933.02Chaperone protein dnaJ OS=Colwellia psychrerythrae... [more]
SIS1_YEAST6.478e-1955.42Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJB6_XENTR6.478e-1956.79DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNAJ_VIBCM6.478e-1930.37Chaperone protein dnaJ OS=Vibrio cholerae serotype... [more]
DNAJ_VIBCH6.478e-1930.37Chaperone protein dnaJ OS=Vibrio cholerae GN=dnaJ ... [more]
DNAJ_VIBC36.478e-1930.37Chaperone protein dnaJ OS=Vibrio cholerae serotype... [more]
DNAJ_LISW66.478e-1929.38Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YM22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271386 ID=DY271386; Name=DY271386; organism=Citrus clementina; type=EST; length=979bp
GTAGCGTTCTCCTCGAGAAAAATAATTTTCTGGGTCTGTTTCGTTTCTGT
GGATTCCTGTTAAGAAACTCAAAACAAGATGTTTGGAAGAGCACCGAAGA
AGAGCAATAATACGAGGTACTATGAGATCCTGGGGGTGTCCAAGAACGCT
TCCGCTGAGGACTTGAAGAAGGCTTATAAAAAAGCTGCCATCAAGAATCA
TCCCGACAAGGGCGGCGATCCTGAGAAGTTTAAAGAGTTGGCTCAGGCTT
ACGAGGTTCTGAGTGATCCTGAGAAGCGTGAGATATATGATCAGTACGGT
GAGGATGCACTCAAGGAAGGAATGGGTGGTGGCGCTGGCGCCCATGACCC
GTTTGATATCTTTTCGTCTTTCTTTGGCGGCAGCCCATTCGGAGGTGGTA
GCAGCAGGGGACGGAGACAGAGGCGGGGCGAGGACGTGGTTCATCCTTTG
AAGGTGTCCTTGGAGGATCTTTATCTGGGTACCTCGAAGAAGCTCTCACT
TTCGCGGAATGTGATATGCTCGAAGTGCAGTGGCAAAGGGTCAAAATCTG
GCGCTTCGATGAAGTGTTCTGGTTGCCAAGGTACTGGTATGAAGGTCTCG
ATAAGGCACCTAGGACCCTCTATGATTCAGCAGATGCAGCATCCTTGCAA
TGAATGCAAGGGTACCGGTGAGACCCTCAACGATAAAGAACGCTGCCCTC
AGTGCAGGGGAAAGAAGGTTGTTCAGGAGAAAAAGGTGCCTGAGGTCATT
GTTGAGAAGGGCATGCCAAAATGGCAAAAAGATTACCTTCCCTGGTGGAG
CAAAAGAAACGCCGGATACAGTCCCTGGAAGACAAATTATTTTGTCCTCA
GCAGAAGGGACATCCAAAGTTCAAGAAAAAGGGAAAAAAACTCCTTTTAA
AACCAAATTTGGCCCTTAACTGAGGGCCCTCCGCCGTTTCCCATTTGCAC
CGAACTCCCCCGGAAGGGGAAGGCACCCT
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