DY271386

Overview
NameDY271386
Unique NameDY271386
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length979
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOB8 (Chaperone protein dnaJ OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 62/212 (29.25%), Postives = 98/212 (46.23%), Query Frame = 1
Query:  109 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGA-GAHDPFDI----XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            N  YYE+LG+ K AS +++K+A++K A+K HPD+        EKFKE+ +AY+VLSDPEK+  YDQ+G  A     G GGG  G  D FD+                            D+ + + ++ E+   G  K++S++RN                           +V ++   P         C+ C+GTG+ +  ++ C +CRG
Sbjct:    3 NKDYYELLGLQKGASDDEIKRAFRKLAVKYHPDRNQGNAEAEEKFKEINEAYQVLSDPEKKAKYDQFGSAAFDGSGGFGGGGFGGFDGFDMGGFGDIFESFFGGGGSNSRRRNGPVRGNDIEYTITLTFEEAVFGVEKEISVTRNENCEHCHGSGAEPGTNAKTCPTCSGSGQVRVQRQTPLGSFVSTSTCDTCRGTGKII--EKPCSECRG 212          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein dnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 72/209 (34.45%), Postives = 96/209 (45.93%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF-----DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV-IXXXXXXXXXXXXXXXXXXXXQGTGMKVSIR-HLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            YYEIL VS+NASAE++KK+Y+K   K HPDK  GD    EKFK++++AYEVLS+PEKR  YD+YG      G   G      F     DI                        D+ + ++VSLED + G    +S   NV                       G G   S+R   G   I+++   CN C G GE +  K +C +C G
Sbjct:    6 YYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKGIKVPISYVTNVKCSSCSGIGSEGAVNSVKCGNCNGAG---SVRTRKGFLTIEEV---CNVCNGEGEVI--KNKCRRCGG 206          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMF (Chaperone protein dnaJ OS=Anaplasma marginale (strain Florida) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.478e-19
Identity = 72/209 (34.45%), Postives = 96/209 (45.93%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPF-----DIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV-IXXXXXXXXXXXXXXXXXXXXQGTGMKVSIR-HLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            YYEIL VS+NASAE++KK+Y+K   K HPDK  GD    EKFK++++AYEVLS+PEKR  YD+YG      G   G      F     DI                        D+ + ++VSLED + G    +S   NV                       G G   S+R   G   I+++   CN C G GE +  K +C +C G
Sbjct:    6 YYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKGIKVPISYVTNVKCSSCSGIGSEGAVNSVKCGNCNGAG---SVRTRKGFLTIEEV---CNVCNGEGEVI--KNKCRRCGG 206          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_YERE8 (Chaperone protein dnaJ OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.460e-19
Identity = 64/204 (31.37%), Postives = 98/204 (48.04%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            YYE+LGV K+A   ++KKAYK+ A+K HPD+  D     E FKE+ +AYE+L+DP+KR  YDQYG  A ++ GMGGG       D                         D+ + + ++LE+   G +K++ + + N                      +G G +V +R  G   +QQ    C  C G+G+ +  K+ C +C G
Sbjct:    6 YYEVLGVKKDADEREIKKAYKRLAVKYHPDRNQDENDTGENFKEVKEAYEILTDPQKRAAYDQYGHAAFEQGGMGGGGFGGGGADFTDIFGDVFGDIFGGGRRQRASRGSDLRYNMDLTLEEAVRGVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAG-QVHMRQ-GFFTVQQ---ACPTCHGSGQII--KDPCNKCHG 202          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.460e-19
Identity = 67/222 (30.18%), Postives = 91/222 (40.99%), Query Frame = 1
Query:  103 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA----------------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETLNDKERCPQCRG 711
            S    YYEILGV +NAS E++KKAY++   K HPD    PE   KFKE+ +AY+VLSDPEKR++YD YG  A +     GAGA                 + FD                        ED+V P++++LE+ + GT+  + + R V                                           PC+ C GTG   +    CP C G
Sbjct:    4 STKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLSDPEKRKLYDMYGHAAFE-----GAGAQQRVETTEIPPIEEILREFFDFDIGSIFERATGRRRARRRRSVKGEDIVVPVEITLEEAFKGTTVPIEVEREV-------------------------------------------PCSACGGTGYDESKSRTCPTCGG 177          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.105e-18
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE-----KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHD-PF 354
            YY++LGV +N+S +D+KKAY++ A+K HPDK  D +     +FKE+A+AYEVLSD +KR+IYD+YG++ L  G GGG   +D PF
Sbjct:    4 YYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLAGGGGGGGSHYDVPF 88          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.105e-18
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 339
            YYE+LGV KNAS +++KKAY+K A+K+HPD+  D     EKFKE+ +AYE+LSDPEK+  YDQYG   +   M GG G
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFG 83          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.105e-18
Identity = 67/220 (30.45%), Postives = 96/220 (43.64%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALKE--------GMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQ----------HPCNECKGTGETLNDKERCPQCRG 711
            YYEILGVS++A  +++KKAY++ A K HPD   D     EKFKE+++AYE+LSDP+KR  YDQYG   + E           G  G  D FD+                        D+ + +K+  ED   GT+KK+++ R                        GT  K   +  G   ++  Q            C+ C G G  ++D   CP C+G
Sbjct:    7 YYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDFNFEDFAQRGFGGFDDIFDM-------FFGGGMGRRRRGPRPGADLQYRMKIPFEDAAFGTTKKITIPRT----------ETCDTCNGTGAKPGTSPKTCPQCNGSGQVRYTQRTPFGQFAQTRTCDRCGGRGTIIDDP--CPTCQG 207          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.358e-18
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA 342
            YY++LGVSK AS E++KKAY+K A+K HPDK  GD E   +FKE+++AYEVLSD +KRE YD+YG+D    G GG  GA
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGA 81          

HSP 2 Score: 20.7866 bits (42), Expect = 1.358e-18
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3
Query:  432 GRGSSFEGVLGG 467
            G GS FEG+ GG
Sbjct:  103 GGGSFFEGLFGG 114          
BLAST of DY271386 vs. ExPASy Swiss-Prot
Match: DNAJ_THISH (Chaperone protein dnaJ OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.443e-18
Identity = 66/208 (31.73%), Postives = 96/208 (46.15%), Query Frame = 1
Query:  118 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKV--SIRHLGPSMIQQ----MQHPCNECKGTGETLNDKERCPQCRG 711
            YYEILGV+KNAS  +LKKA+++ A+K+HPD+  GD E   KFKE  +AYE+L+DP+KR  YDQ+G   +    GGGA     F                          D+ + L+++LE+   GT  K+ +   V                     +GT  +   +   +G   +QQ    +Q  C  C GTG+ +     C  C G
Sbjct:    6 YYEILGVAKNASEAELKKAFRRLAMKHHPDRNPGDKESEEKFKEAKEAYEILTDPQKRAAYDQFGHAGVDPSAGGGARGGASFSDIFEDIFGDIFGGGRGGGSRVYRGSDLQYNLELTLEEAVFGTEVKIRVPSLV----------ECGECHGSGAEKGTTPETCGTCGGVGQVRMQQGFFSVQQTCPRCHGTGKMIT--HPCKACHG 201          
The following BLAST results are available for this feature:
BLAST of DY271386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CLOB86.478e-1929.25Chaperone protein dnaJ OS=Clostridium beijerinckii... [more]
DNAJ_ANAMM6.478e-1934.45Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_ANAMF6.478e-1934.45Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_YERE88.460e-1931.37Chaperone protein dnaJ OS=Yersinia enterocolitica ... [more]
DNAJ2_AQUAE8.460e-1930.18Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
DNJ6B_XENLA1.105e-1852.94DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNAJ_RALME1.105e-1856.41Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_HALOH1.105e-1830.45Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_CHLFF1.358e-1859.49Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_THISH1.443e-1831.73Chaperone protein dnaJ OS=Thioalkalivibrio sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YM22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271386 ID=DY271386; Name=DY271386; organism=Citrus clementina; type=EST; length=979bp
GTAGCGTTCTCCTCGAGAAAAATAATTTTCTGGGTCTGTTTCGTTTCTGT
GGATTCCTGTTAAGAAACTCAAAACAAGATGTTTGGAAGAGCACCGAAGA
AGAGCAATAATACGAGGTACTATGAGATCCTGGGGGTGTCCAAGAACGCT
TCCGCTGAGGACTTGAAGAAGGCTTATAAAAAAGCTGCCATCAAGAATCA
TCCCGACAAGGGCGGCGATCCTGAGAAGTTTAAAGAGTTGGCTCAGGCTT
ACGAGGTTCTGAGTGATCCTGAGAAGCGTGAGATATATGATCAGTACGGT
GAGGATGCACTCAAGGAAGGAATGGGTGGTGGCGCTGGCGCCCATGACCC
GTTTGATATCTTTTCGTCTTTCTTTGGCGGCAGCCCATTCGGAGGTGGTA
GCAGCAGGGGACGGAGACAGAGGCGGGGCGAGGACGTGGTTCATCCTTTG
AAGGTGTCCTTGGAGGATCTTTATCTGGGTACCTCGAAGAAGCTCTCACT
TTCGCGGAATGTGATATGCTCGAAGTGCAGTGGCAAAGGGTCAAAATCTG
GCGCTTCGATGAAGTGTTCTGGTTGCCAAGGTACTGGTATGAAGGTCTCG
ATAAGGCACCTAGGACCCTCTATGATTCAGCAGATGCAGCATCCTTGCAA
TGAATGCAAGGGTACCGGTGAGACCCTCAACGATAAAGAACGCTGCCCTC
AGTGCAGGGGAAAGAAGGTTGTTCAGGAGAAAAAGGTGCCTGAGGTCATT
GTTGAGAAGGGCATGCCAAAATGGCAAAAAGATTACCTTCCCTGGTGGAG
CAAAAGAAACGCCGGATACAGTCCCTGGAAGACAAATTATTTTGTCCTCA
GCAGAAGGGACATCCAAAGTTCAAGAAAAAGGGAAAAAAACTCCTTTTAA
AACCAAATTTGGCCCTTAACTGAGGGCCCTCCGCCGTTTCCCATTTGCAC
CGAACTCCCCCGGAAGGGGAAGGCACCCT
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