DY271396

Overview
NameDY271396
Unique NameDY271396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length970
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.738e-62
Identity = 138/278 (49.64%), Postives = 175/278 (62.95%), Query Frame = 1
Query:  121 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEESYWM**LPGKVAGCLRLRGKLARGWA 942
            K+    ++ V DLS A +GR EI +AE EMPGLMA R EF   QP KGA++TGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQDH              +KGETL +YW  T +  ++G  G    GP++I+DDGGDATLL+H G +AE   +    L +P S +      +   IR  L  DP  Y +   +++GV+EETTTGV RL +M   GTLLF AINVNDS  K+KFDNL GC  SL  G + +  +  + GKVA C+   G + +G A
Sbjct:    6 KALHENDYLVADLSLAAWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARVTGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALAVQGTPVFAYKGETLADYWDYTHRIFEFGAAGTDGEGPNMILDDGGDATLLMHLGKRAE---KDLSLLDNPKSEEET---CLYAAIRAKLAVDPTWYSRKGAQIIGVTEETTTGVHRLKEMSAAGTLLFRAINVNDSVTKSKFDNLYGCRESLVDGIKRATDV-MIAGKVA-CVAGYGDVGKGSA 275          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_BORPE (Adenosylhomocysteinase OS=Bordetella pertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.738e-62
Identity = 128/243 (52.67%), Postives = 157/243 (64.61%), Query Frame = 1
Query:  139 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            ++ V D++ A +GR E+ +AE EMPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E +++   I++ L  DPK Y     ++ GV+EETTTGV RLYQM + G L F AINVNDS  K+KFDNL GC  SL  G + +
Sbjct:   11 DYIVADMALAGWGRRELAIAETEMPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDISVLAKPGS---EEERVLFAAIKETLGRDPKWYSTRLAQIKGVTEETTTGVHRLYQMSQKGELAFAAINVNDSVTKSKFDNLYGCRESLVDGIKRA 247          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.738e-62
Identity = 132/244 (54.10%), Postives = 159/244 (65.16%), Query Frame = 1
Query:  148 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            + D+S AD+GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   +    L  P S    E +I+   I+  L  D   Y +   +++GV+EETTTGV RL +M   GTLLF AINVNDS  K+KFDNL GC  SL  G + +
Sbjct:   13 IADISLADWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLAHPGS---EEERILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLLFRAINVNDSVTKSKFDNLYGCRESLVDGIKRA 250          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.670e-62
Identity = 127/238 (53.36%), Postives = 158/238 (66.39%), Query Frame = 1
Query:  133 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSL 846
            G +  + D++ A FGR E+++AE EMPGLMA RA++G  +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH               KGETL+EYW  T + L+W  GG P++I+DDGGDAT L+  G KAE   +    L +P+   N E   +   I+  L  D   Y + K  + GV+EETTTGV RLY+MQ++G L FPAINVNDS  K+KFDNL GC  SL
Sbjct:   14 GTDCVIADINLAAFGRKELDIAETEMPGLMALRAKYGNEKPLKGARIAGSLHMTIQTAVLIETLEELGADVRWASCNIFSTQDHAAAAIAANGTPVFAVKGETLEEYWAYTHRILEWSDGGAPNMILDDGGDATGLVILGTKAE---QDITVLDNPS---NEEETFLFASIKKKLAEDSSFYSRTKAAIQGVTEETTTGVARLYKMQKSGELPFPAINVNDSVTKSKFDNLYGCRESL 245          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_RHILO (Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.670e-62
Identity = 126/240 (52.50%), Postives = 158/240 (65.83%), Query Frame = 1
Query:  136 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKG 855
            +++ V D+S A +GR E+++AE EMPGLMACR EFG  +P KGA+ITGSLHMTIQTAVLIETL ALGA++RW SCNIFSTQDH               KGE+L++YW  T++   W  GG  ++I+DDGGDAT+ I  G +AE        L +P S +   F      ++  LKA P  + K K  + GV+EETTTGV RLYQ+Q+ G L FPAINVNDS  K+KFDN  GC  SL  G
Sbjct:    5 KDYVVADISLAGWGRKELDIAETEMPGLMACREEFGAKKPLKGARITGSLHMTIQTAVLIETLKALGADIRWASCNIFSTQDHAAAAIAEAGIPVFAVKGESLEQYWDYTDRIFQWADGGLSNMILDDGGDATMYILIGARAE---AGEDVLSNPQSEEEEYF---YAQVKKRLKASPGFFTKQKAAIRGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDG 238          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_GEOSL (Adenosylhomocysteinase OS=Geobacter sulfurreducens GN=ahcY PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.670e-62
Identity = 137/294 (46.60%), Postives = 179/294 (60.88%), Query Frame = 1
Query:  100 TMALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN---AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEESYWM**LPGKVA----------GCLR-LRGKLARGW 939
            T  ++ + + +  ++ + D+S A +GR E+ +AE EMPGLMA R E+  ++P +GA+I GSLHMTIQTA+LIETL ALGAEVRW SCNIFSTQDH              +KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G  AE+         DP+   N    E Q +   I+  L   P  Y K    + GV+EETTTGV RLYQM E G L FPAINVNDS  K+KFDN+ GC  SL  G + +  +  + GKVA          GC + +RG  A+ W
Sbjct:    2 TQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIAGSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYWEFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEK---------DPSVIANPTCEEEQYLFASIKKRLAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKFDNIYGCRESLVDGIKRATDV-MIAGKVAVICGYGEVGKGCAQAMRGLQAQVW 285          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 7.965e-62
Identity = 130/244 (53.28%), Postives = 160/244 (65.57%), Query Frame = 1
Query:  148 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            + D+S A++GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   +    L +P S    E +I+   I+  L  D   Y +   +++GV+EETTTGV RL +M   GTL+F AINVNDS  K+KFDNL GC  SL  G + +
Sbjct:   13 IADISLAEWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLANPGS---EEERILFAAIKAKLAEDSTWYSRKSAQIIGVTEETTTGVHRLKEMSAKGTLMFRAINVNDSVTKSKFDNLYGCRESLVDGIKRA 250          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.359e-61
Identity = 127/243 (52.26%), Postives = 159/243 (65.43%), Query Frame = 1
Query:  139 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            +F V D++ A +GR E+ +AE EMPGLMA R E+  +QP +GA+I GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH              +KGE+L EYW  + K  +W  G   ++I+DDGGDATLL+  G KAE   +  G +  P    N E   +   I+  L  DP  Y K  E + GV+EETTTGV RLYQ++++G L FPAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:    6 DFHVADIALAGWGRKELNIAETEMPGLMATRDEYHAAQPLRGARIAGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAFKGESLDEYWEFSHKIFEWPEGQPANMILDDGGDATLLLMLGSKAE---KDIGVIAHPT---NEEETALFASIKRHLAIDPHWYSKRLEHIQGVTEETTTGVHRLYQLEKDGHLPFPAINVNDSVTKSKFDNLYGCRESLVDGIKRA 242          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.774e-61
Identity = 127/253 (50.20%), Postives = 163/253 (64.43%), Query Frame = 1
Query:  121 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++      P  + ++     GVSEETTTGV RLYQ+   G LL PAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLKRIAIERPGYWTRVVNDWKGVSEETTTGVHRLYQIAATGRLLVPAINVNDSVTKSKFDNLYGCRESLADGLKRA 253          
BLAST of DY271396 vs. ExPASy Swiss-Prot
Match: SAHH_XYLF2 (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M23) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.774e-61
Identity = 127/253 (50.20%), Postives = 163/253 (64.43%), Query Frame = 1
Query:  121 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSGPKNKFDNLNGCPHSLPKGFEES 867
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EYW CT +AL +    G   GP+LIVDDGGDATLLIH+G + E      G       +D+ E Q++  +++      P  + ++     GVSEETTTGV RLYQ+   G LL PAINVNDS  K+KFDNL GC  SL  G + +
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEYWDCTLQALTFTLADGTLTGPELIVDDGGDATLLIHKGYELE-----NGSTWVDEPSDSLEEQVIKRLLKRIAIERPGYWTRVVNDWKGVSEETTTGVHRLYQIAATGRLLVPAINVNDSVTKSKFDNLYGCRESLADGLKRA 253          
The following BLAST results are available for this feature:
BLAST of DY271396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
SAHH_LEPCP2.738e-6249.64Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_BORPE2.738e-6252.67Adenosylhomocysteinase OS=Bordetella pertussis GN=... [more]
SAHH_ACISJ2.738e-6254.10Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_SYNS94.670e-6253.36Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_RHILO4.670e-6252.50Adenosylhomocysteinase OS=Rhizobium loti GN=ahcY P... [more]
SAHH_GEOSL4.670e-6246.60Adenosylhomocysteinase OS=Geobacter sulfurreducens... [more]
SAHH_DIAST7.965e-6253.28Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_CHRVO1.359e-6152.26Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_XYLFT1.774e-6150.20Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_XYLF21.774e-6150.20Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YN11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271396 ID=DY271396; Name=DY271396; organism=Citrus clementina; type=EST; length=970bp
CGCTTGTACAATTATTCACTTTGTTTGGTTAGTTTCCAAAGAGAGAGTAG
ATTGCCCTCTCTTCCTTCTTTCTTTTAGATCTATCAATTCTATTAATCAA
CCATGGCTTTGTCCGTCGAGAAATCCGCTAGCGGTCGTGAATTCAAGGTG
AAGGATCTGTCCCAGGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGA
AGTCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCAC
AGCCTTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAG
ACGGCCGTCCTCATCGAGACACTCACCGCTCTCGGCGCCGAAGTCCGCTG
GTGCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCG
CACGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAG
TACTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCC
AGATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGG
GAGTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCG
GCCTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGA
TGGGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAG
TTGGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTACCAGATG
CAAGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGG
CCCCAAGAACAAGTTTGATAACTTGAATGGATGCCCGCACTCCCTCCCCA
AAGGGTTTGAGGAAAGCTACTGGATGTAATGATTGCCCGGAAAGGTTGCC
GGTTGTTTGCGGTTAAGGGGGAAGTTGGCAAGGGGTTGGGCCGGCTGCTT
TGAAACCAGGCCCGGGCCCC
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