DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BUCAP (Oligoribonuclease OS=Buchnera aphidicola subsp. Schizaphis graminum GN=orn PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.203e-27 Identity = 68/154 (44.16%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTETQS 682 L+WIDLEMTGL E+ RI+EIA +ITD KL EGP + IHQ +E + M EW H+ +GL ++V S E +AE + + F+KK V + + GNSVY D FL +YMP+L + F + +DVS+IK L W P SFK+ + Q+ Sbjct: 8 LIWIDLEMTGLNSEIHRIIEIATVITDTKLNIISEGPVIAIHQKEEHIVIMDEWNTKIHKKNGLIKRVQKSIYNESKAESKTIFFLKKWVPIQSSPICGNSVYQDRKFLARYMPNLENYFHYRCIDVSTIKELVNRWCP------SFKKIKKQN 155
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BURS3 (Oligoribonuclease OS=Burkholderia sp. (strain 383) GN=orn PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.433e-27 Identity = 58/152 (38.16%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE EA +Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W P Sbjct: 7 STSQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAEQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQP 158 HSP 2 Score: 29.261 bits (64), Expect = 1.433e-27 Identity = 17/31 (54.84%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QEN 734 IY+ F K H AL DI ESI ELKY +E+ Sbjct: 160 IYKGF-QKRAMHTALADIHESIDELKYYREH 189
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_FRATW (Oligoribonuclease OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.439e-27 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143 HSP 2 Score: 30.0314 bits (66), Expect = 1.439e-27 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENI 737 K+ H+AL+DI+ESI ELK+ ++ + Sbjct: 151 KKNTHKALDDIRESIAELKFYRQKL 175
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_FRATO (Oligoribonuclease OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.439e-27 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143 HSP 2 Score: 30.0314 bits (66), Expect = 1.439e-27 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENI 737 K+ H+AL+DI+ESI ELK+ ++ + Sbjct: 151 KKNTHKALDDIRESIAELKFYRQEL 175
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_FRATH (Oligoribonuclease OS=Francisella tularensis subsp. holarctica (strain LVS) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.439e-27 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143 HSP 2 Score: 30.0314 bits (66), Expect = 1.439e-27 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENI 737 K+ H+AL+DI+ESI ELK+ ++ + Sbjct: 151 KKNTHKALDDIRESIAELKFYRQKL 175
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_FRATF (Oligoribonuclease OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.439e-27 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I+EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKIIEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143 HSP 2 Score: 30.0314 bits (66), Expect = 1.439e-27 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENI 737 K+ H+AL+DI+ESI ELK+ ++ + Sbjct: 151 KKNTHKALDDIRESIAELKFYRQKL 175
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BURCH (Oligoribonuclease OS=Burkholderia cenocepacia (strain HI2424) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.428e-27 Identity = 58/152 (38.16%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE EA Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W P Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQP 158 HSP 2 Score: 29.261 bits (64), Expect = 2.428e-27 Identity = 17/31 (54.84%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QEN 734 IY+ F K H AL DI ESI ELKY +E+ Sbjct: 160 IYKGF-QKRAMHTALADIHESIDELKYYREH 189
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BURCA (Oligoribonuclease OS=Burkholderia cenocepacia (strain AU 1054) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.428e-27 Identity = 58/152 (38.16%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE EA Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W P Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQP 158 HSP 2 Score: 29.261 bits (64), Expect = 2.428e-27 Identity = 17/31 (54.84%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QEN 734 IY+ F K H AL DI ESI ELKY +E+ Sbjct: 160 IYKGF-QKRAMHTALADIHESIDELKYYREH 189
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_DICNV (Oligoribonuclease OS=Dichelobacter nodosus (strain VCS1703A) GN=orn PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.174e-27 Identity = 62/142 (43.66%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 K LVWIDLEMTGL + D I+EIA I+TD +L EGP + ++Q + L M W Q HH ASGL E+V S+ EAE Q + F+++ + GNS+ D FL + MP L + F + +DVS+IK L WYP Sbjct: 4 KNNLVWIDLEMTGLDPQHDEIIEIATIVTDAQLNILAEGPVIAVYQPEPILAQMDAWNQKHHGASGLIERVRQSSFNTLEAEAQTLSFLEQYSEKGRSPICGNSICQDRRFLSRLMPRLEAFFHYRNLDVSTIKELVARWYP 145 HSP 2 Score: 28.1054 bits (61), Expect = 3.174e-27 Identity = 12/26 (46.15%), Postives = 19/26 (73.08%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIF 740 K H+AL DI++SI EL++ ++ IF Sbjct: 151 KNTTHQALQDIRDSIDELRHYRQRIF 176
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_FRATT (Oligoribonuclease OS=Francisella tularensis subsp. tularensis GN=orn PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.175e-27 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143 HSP 2 Score: 30.0314 bits (66), Expect = 3.175e-27 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENI 737 K+ H+AL+DI+ESI ELK+ ++ + Sbjct: 151 KKNTHKALDDIRESIAELKFYRQKL 175 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |