DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_FRAT1 (Oligoribonuclease OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=orn PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.175e-27 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPW 631 L+WIDLEMTGL ++ +I EIA IITD L E + I+Q E L +M EWC H +GLT++V S ++ AE+Q++EF++K V + L GNS++ D FL KYMP++ + ++DV+++K L W Sbjct: 7 LIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDEYCHYRMLDVTTLKLLNQYW 143 HSP 2 Score: 30.0314 bits (66), Expect = 3.175e-27 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENI 737 K+ H+AL+DI+ESI ELK+ ++ + Sbjct: 151 KKNTHKALDDIRESIAELKFYRQKL 175
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_WIGBR (Oligoribonuclease OS=Wigglesworthia glossinidia brevipalpis GN=orn PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 4.127e-27 Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 K L+WIDLEMTGL +E DRI+EIA +ITD + EGP + I Q++E L M W H +GL ++V S E+ A ++F+ V + G+S+ D +FL KYMPDL F + +DVS IK L W P+ L ++ K T Sbjct: 9 KKNLIWIDLEMTGLNLENDRIIEIATVITDKYVKILAEGPSIAIFQSEEQLKKMNSWNIFTHTKNGLIDRVRKSKYNEKNAMIDTLKFISSWVPFGKSPICGSSINHDRLFLSKYMPDLEKYFHYRCLDVSVIKELARRWKPKILSKLKKKHT 161 HSP 2 Score: 30.4166 bits (67), Expect = 4.127e-27 Identity = 13/29 (44.83%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFKTN 749 K+ H+AL+DIK+SI EL + ++ K N Sbjct: 158 KKHTHKALDDIKDSIKELLFYKDTFIKLN 186
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BURVG (Oligoribonuclease OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=orn PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.086e-27 Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE +A Q+ F+ V + GNS+ D F+ ++MP+ F + +DVS++K LC W P Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAQAAAQLQAFLADYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQP 158 HSP 2 Score: 29.261 bits (64), Expect = 9.086e-27 Identity = 17/31 (54.84%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QEN 734 IY+ F K H AL DI ESI ELKY +E+ Sbjct: 160 IYKGF-QKRAMHTALADIHESIDELKYYREH 189
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BURCM (Oligoribonuclease OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=orn PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.182e-26 Identity = 57/152 (37.50%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 182 NSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 ++ P ++ LVW+D+EMTGL + DRI+EIA ++T+ L +VEGP IHQ+ E L M +W ++ H SGL ++V S +TE +A Q+ F+ + V + GNS+ D F+ ++MP+ F + +DVS++K LC W P Sbjct: 7 SASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCGNSICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQP 158 HSP 2 Score: 28.1054 bits (61), Expect = 1.182e-26 Identity = 16/27 (59.26%), Postives = 17/27 (62.96%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY 722 IY+ F K H AL DI ESI ELKY Sbjct: 160 IYKGF-QKRAMHTALADIHESIDELKY 185
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEF5 (Oligoribonuclease OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=orn PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.545e-26 Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ+ E L M EW H SGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M L S F + +DVS++K L W P D+++ SFK+ T Sbjct: 7 LIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHQSDEILAGMDEWNTRQHGGSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMKALESYFHYRNLDVSTLKELAARWAP-DVRD-SFKKGST 156 HSP 2 Score: 26.5646 bits (57), Expect = 1.545e-26 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DI+ESI EL++ +++ K Sbjct: 153 KGSTHLALDDIRESIAELQHYRKHFIK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEAE (Oligoribonuclease OS=Pseudomonas aeruginosa GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.545e-26 Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ +E L M EW H SGLT++V S ++ EAE Q + F+++ V + + GNS+ D FL ++MP L F + +DVS++K L W P+ + SFK+ T Sbjct: 7 LIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEILAGMDEWNTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRLEGYFHYRNLDVSTLKELAARWAPQVRE--SFKKGNT 156 HSP 2 Score: 27.335 bits (59), Expect = 1.545e-26 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DI+ESI EL++ +++ K Sbjct: 153 KGNTHLALDDIRESIAELRHYRDHFIK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEAB (Oligoribonuclease OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.545e-26 Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ +E L M EW H SGLT++V S ++ EAE Q + F+++ V + + GNS+ D FL ++MP L F + +DVS++K L W P+ + SFK+ T Sbjct: 7 LIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEILAGMDEWNTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRLEGYFHYRNLDVSTLKELAARWAPQVRE--SFKKGNT 156 HSP 2 Score: 27.335 bits (59), Expect = 1.545e-26 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DI+ESI EL++ +++ K Sbjct: 153 KGNTHLALDDIRESIAELRHYRDHFIK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEA7 (Oligoribonuclease OS=Pseudomonas aeruginosa (strain PA7) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.545e-26 Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL + D I+E+A I+TD L EGP + IHQ +E L M EW H SGLT++V S ++ EAE Q + F+++ V + + GNS+ D FL ++MP L F + +DVS++K L W P+ + SFK+ T Sbjct: 7 LIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEWNTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRLEGYFHYRNLDVSTLKELAARWAPQVRE--SFKKGNT 156 HSP 2 Score: 27.335 bits (59), Expect = 1.545e-26 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DI+ESI EL++ +++ K Sbjct: 153 KGNTHLALDDIRESIAELRHYRDHFIK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_AERS4 (Oligoribonuclease OS=Aeromonas salmonicida (strain A449) GN=orn PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.545e-26 Identity = 61/146 (41.78%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEIS 658 LVWID+EMTGL E + +LEIA I+TD L EGP + IHQ+ E L M +W N H SGL +V S E A + ++F+++ V T L GNS+ D F+ K+M +L + F + VDVS+IK L W P L + + Sbjct: 8 LVWIDMEMTGLDPEENVVLEIATIVTDKDLNVLAEGPVIAIHQSDEELAKMDDWNVNTHTRSGLVARVKESQYDETRAVAETLDFIRQWVPERTSPLCGNSIGQDRRFMVKHMSELEAFFHYRNVDVSTIKELVRRWQPELLDQFT 153 HSP 2 Score: 31.5722 bits (70), Expect = 1.545e-26 Identity = 13/28 (46.43%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 +K H AL+DI+ESI EL++ + ++FK Sbjct: 153 TKSGSHMALDDIRESIAELRFYRSHVFK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_COREF (Oligoribonuclease OS=Corynebacterium efficiens GN=orn PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.999e-26 Identity = 57/141 (40.43%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPL-LAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPR 640 LVW+DLEMTGL +E I+E+A ++TD L EG DLV+H T E L M ++ H++SGLT + S ++ ++AE V+ ++++ P LAGNS+ D F+++ MP L + + +VDVSS+K L W PR Sbjct: 21 LVWVDLEMTGLDLERHVIVEVAALVTDANLNILGEGVDLVVHATDEELARMDDFVTRMHDSSGLTPLIRASTVSLKDAEDAVLALIEEHCDPAHPAPLAGNSIATDRAFIREQMPRLDAALHYRMVDVSSVKELARRWCPR 161 HSP 2 Score: 34.6538 bits (78), Expect = 1.999e-26 Identity = 19/39 (48.72%), Postives = 23/39 (58.97%), Query Frame = 3 Query: 624 CPGILEIYRKFPSKEQKHRALNDIKESIMELKY*QENIF 740 CP +Y K P+K HRAL DI ESI EL Y + + F Sbjct: 159 CP---RVYYKQPTKGLAHRALADIVESIRELDYYRRSFF 194 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |