DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_MYCA1 (Oligoribonuclease OS=Mycobacterium avium (strain 104) GN=orn PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.000e-26 Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPR 640 LVWID EMTGL + D+++EIA ++TD +L +G D+VIH L +MGE H SGL ++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L S + ++DVSSIK LC WYPR Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDAELNVLGDGVDVVIHADDAALAAMGEVVTEMHSRSGLIDEVKASTVDLATAEEMVLDYIRTHVKAPKTAPLAGNSIATDRAFIVRDMPALDSYLHYRMIDVSSIKELCRRWYPR 145 HSP 2 Score: 28.8758 bits (63), Expect = 2.000e-26 Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QENIF 740 IY P K HRAL DI ESI EL++ + F Sbjct: 146 IYFGQPVKGLTHRALADIHESIRELQFYRRTAF 178
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_NEIMA (Oligoribonuclease OS=Neisseria meningitidis serogroup A GN=orn PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.008e-26 Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 K L W+D+EMTGL E DRI+E+A IITD L + IHQ+ E LD+M EW H +GLT++V S+ TE E E+++++F+ + V + GNS++ D F+ KYMP L + F + +DVS++K L W P Sbjct: 4 KNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEVYAIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPRRATPMCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNP 145 HSP 2 Score: 25.7942 bits (55), Expect = 2.008e-26 Identity = 11/24 (45.83%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QEN 734 K H+AL+DI ESI E+++ +E+ Sbjct: 153 KRGSHKALDDILESIEEMRHYREH 176
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ACISJ (Oligoribonuclease OS=Acidovorax sp. (strain JS42) GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.268e-26 Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 167 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTE 673 + + N P + LVW+D EM+GL E +R+LEIA ++T LT VEGP IHQ LD M W + H SGL +KV S +TE +AE++++ F+ + V + GNS+ D FL KYMP L + F + VDVS++K L W P SFK+ + Sbjct: 1 MSDTANPTVPALAKSDQNLVWLDCEMSGLNPETERLLEIAVVVTSADLTLRVEGPVFAIHQADAVLDGMDAWNKGTHGRSGLIDKVRASTVTEADAERELLAFLSRYVPKGVVPMCGNSIGQDRRFLVKYMPKLEAFFHYRNVDVSTLKELAKRWKPEAYS--SFKKAQ 167
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_MYCUA (Oligoribonuclease OS=Mycobacterium ulcerans (strain Agy99) GN=orn PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.603e-26 Identity = 60/141 (42.55%), Postives = 85/141 (60.28%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPR 640 LVWID EMTGL + D+++EIA ++TD L +G D+VIH L SM + + H SGLTE+V S + AE V++++ ++V T LAGNS+ D F+ + MP L + + ++DVSSIK LC WYPR Sbjct: 5 LVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADMHSRSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRSFIARDMPALDAFLHYRMIDVSSIKELCRRWYPR 145 HSP 2 Score: 30.8018 bits (68), Expect = 2.603e-26 Identity = 17/33 (51.52%), Postives = 19/33 (57.58%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QENIF 740 IY P K HRAL DI ESI EL+Y + F Sbjct: 146 IYFGQPPKGLAHRALADIHESIRELQYYRRTAF 178
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEPK (Oligoribonuclease OS=Pseudomonas putida (strain KT2440) GN=orn PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.407e-26 Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL + D I+E+A I+TD +L EGP + IH + E L M EW H ASGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M +L + F + +DVS++K L W P D+++ SFK+ T Sbjct: 7 LIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRNLENYFHYRNLDVSTLKELAARWAP-DVRD-SFKKGNT 156 HSP 2 Score: 28.4906 bits (62), Expect = 3.407e-26 Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DI+ESI EL++ +E+ K Sbjct: 153 KGNTHLALDDIRESIAELRHYREHFIK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PSEP1 (Oligoribonuclease OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=orn PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.407e-26 Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL + D I+E+A I+TD +L EGP + IH + E L M EW H ASGLT++V S ++ EAE Q + F+++ V + GNS+ D FL ++M +L + F + +DVS++K L W P D+++ SFK+ T Sbjct: 7 LIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRNLENYFHYRNLDVSTLKELAARWAP-DVRD-SFKKGNT 156 HSP 2 Score: 28.4906 bits (62), Expect = 3.407e-26 Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H AL+DI+ESI EL++ +E+ K Sbjct: 153 KGNTHLALDDIRESIAELRHYREHFIK 179
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_SODGM (Oligoribonuclease OS=Sodalis glossinidius (strain morsitans) GN=orn PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.407e-26 Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 L+WIDLEMTGL E DRI+EIA ++TD L EGP L I+Q+ L M +W H ASGL ++V SAL E A Q + F+ V + GNS+ D FL +YMP L + F + +DVS++K L W P L + T Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLAILAEGPVLAIYQSDAQLALMNDWNVRTHTASGLVDRVRQSALDEEAAVAQTLAFLADWVPAGKSPICGNSIGQDRRFLFRYMPALEAYFHYRYLDVSTLKELARRWKPEILSGLKKNNT 157 HSP 2 Score: 29.6462 bits (65), Expect = 3.407e-26 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K H+AL+DI+ES+ EL Y +E+ + Sbjct: 154 KNNTHQALDDIRESVAELAYYREHFIR 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ACIAC (Oligoribonuclease OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=orn PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.868e-26 Identity = 66/150 (44.00%), Postives = 88/150 (58.67%), Query Frame = 2 Query: 224 VWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTE 673 VW+D EMTGL E DR+LEIA ++T +L VEGP IHQ+ LD M W + H SGL EKV S +TE EAE+ ++EF+ + V + GNS+ D FL +YMP L + F + VDVS++K L W P SFK+ + Sbjct: 21 VWLDCEMTGLDPEKDRLLEIAVVVTGPELEPRVEGPVFAIHQSDALLDGMDAWNKGTHGRSGLIEKVRASTVTEAEAEQAILEFLARYVRKGVAPMCGNSIGQDRRFLVRYMPKLEAFFHYRNVDVSTLKELSRRWKPE--VYASFKKAQ 168
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_MYCPA (Oligoribonuclease OS=Mycobacterium paratuberculosis GN=orn PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.411e-26 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPR 640 LVWID EMTGL + D+++EIA ++TD +L +G D+VIH L +MGE H SGL ++V S + AE+ V+++++ +V T LAGNS+ D F+ + MP L + + ++DVSSIK LC WYPR Sbjct: 5 LVWIDCEMTGLDLGSDKLIEIAALVTDAELNVLGDGVDVVIHADDAALAAMGEVVTEMHSRSGLIDEVKASTVDLATAEEMVLDYIRTHVKAPKTAPLAGNSIATDRAFIVRDMPALDAYLHYRMIDVSSIKELCRRWYPR 145 HSP 2 Score: 28.8758 bits (63), Expect = 4.411e-26 Identity = 16/33 (48.48%), Postives = 19/33 (57.58%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QENIF 740 IY P K HRAL DI ESI EL++ + F Sbjct: 146 IYFGQPVKGLTHRALADIHESIRELQFYRRTAF 178
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_NEIMF (Oligoribonuclease OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=orn PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.430e-26 Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNV-GTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 K L W+D+EMTGL E DRI+E+A IITD L + +HQ+ E LD+M EW H +GLT++V S TE E E+++++F+ + V G TP + GNS++ D F+ KYMP L + F + +DVS++K L W P Sbjct: 4 KNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEVYAVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATP-MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNP 145 HSP 2 Score: 25.7942 bits (55), Expect = 4.430e-26 Identity = 11/24 (45.83%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QEN 734 K H+AL+DI ESI E+++ +E+ Sbjct: 153 KRGSHKALDDILESIEEMRHYREH 176 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |