DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_YERP3 (Oligoribonuclease OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=orn PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.235e-31 Identity = 70/152 (46.05%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H SGL E+V S +R+AE Q +EF+K+ V + GNSV D FL +YMP+L + F + VDVS++K L W P L FK+ T Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHTGSGLVERVKTSPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYFHYRYVDVSTLKELARRWKPEIL--AGFKKQNT 157 HSP 2 Score: 30.4166 bits (67), Expect = 5.235e-31 Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFKT 746 K+ H+AL+DI+ES+ EL Y +E+ ++ Sbjct: 154 KQNTHQALDDIRESVAELAYYREHFIQS 181
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_AZOSE (Oligoribonuclease OS=Azoarcus sp. (strain EbN1) GN=orn PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.814e-31 Identity = 59/139 (42.45%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+W+D+EMTGL+ + DRI+EIA +ITD +L E P + +HQ LD+M EW +N H SGLT++V S + E +AE Q++ F++++V +T + GNS+ D F+ +YMP L + F + +DVS++K L W P Sbjct: 8 LIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDEWNRNTHGKSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMCGNSICQDRRFMARYMPHLEAWFHYRNLDVSTLKELAKRWRP 146 HSP 2 Score: 31.5722 bits (70), Expect = 6.814e-31 Identity = 16/35 (45.71%), Postives = 24/35 (68.57%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E+Y K K+ KH AL DI+ESI EL++ ++N + Sbjct: 147 EVY-KGVEKKGKHEALADIRESIAELRHYRDNFLR 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ALCBS (Oligoribonuclease OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=orn PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.156e-30 Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+WIDLEMTGL E DRI+EIA I+TD +L EGP L +HQ+ LD M EW HH SGL +V S + + AE Q + F+++ V + GNS+ D FL YMP L + F + +DVS++K L W P Sbjct: 8 LIWIDLEMTGLSPENDRIIEIATIVTDAELNVLAEGPVLAVHQSDALLDGMDEWNTTHHNNSGLVARVKASTVNDAAAESQTIAFLEQYVEAGMSPMCGNSICQDRRFLANYMPKLEAFFHYRNLDVSTLKELARRWKP 146 HSP 2 Score: 33.4982 bits (75), Expect = 1.156e-30 Identity = 16/25 (64.00%), Postives = 20/25 (80.00%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QEN 734 SKE KH AL+DI+ESI EL Y +E+ Sbjct: 153 SKENKHLALDDIRESIAELVYYREH 177
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_HALHL (Oligoribonuclease OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=orn PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.162e-30 Identity = 69/139 (49.64%), Postives = 88/139 (63.31%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+WIDLEMTGL DRI+EIA ++TD L EGP L IHQ + LDSM EW H SGLTE+V S +TE EAE QV+ F+K+ V T + GNS+ D FL ++MPDL + F + +DVS++K L W P Sbjct: 8 LIWIDLEMTGLDPSRDRIIEIAVVVTDSNLDTLAEGPVLAIHQDRSLLDSMDEWNTRQHGRSGLTERVRASTVTEAEAEAQVLAFLKQYVPARTSPMCGNSICQDRRFLARWMPDLEAYFHYRHIDVSTLKELARRWSP 146
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_HAEDU (Oligoribonuclease OS=Haemophilus ducreyi GN=orn PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.162e-30 Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 L+WIDLEMTGL DRI+EIA I+TD L +GP L +HQ L M EWC H A+GL E+V S LTER AE Q ++F+K+ V + + GNSV D FL +YMPDLA F + +DVS++K L W P LQ+ S K + Sbjct: 9 LIWIDLEMTGLDPNQDRIIEIATIVTDKDLNILAKGPVLAVHQPNTLLSKMNEWCIKTHTANGLIERVKQSKLTERAAELQTLDFLKQWVMKGSSPICGNSVAQDKRFLYQYMPDLADYFHYRHLDVSTLKELARRWKPEILQQFSKKNS 158
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_CHRVO (Oligoribonuclease OS=Chromobacterium violaceum GN=orn PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.505e-30 Identity = 60/139 (43.17%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+W+D+EMTGL + DRI+E+A I+TD L E P LVIHQ LD M +W +N H SGL EKV +S ++E EAE+ ++EF+ ++V + GN+++ D F+ ++MP L + F + +DVS++K LC W P Sbjct: 8 LIWLDMEMTGLNPDQDRIIEVAMIVTDSNLNVLAESPVLVIHQPDAILDGMDDWNKNTHGKSGLIEKVKNSTVSEAEAEQLLLEFMMQHVPERATPMCGNTIHQDRRFMARWMPKLEAYFHYRNLDVSTLKELCKRWRP 146 HSP 2 Score: 29.6462 bits (65), Expect = 1.505e-30 Identity = 14/27 (51.85%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K KH AL DI ESI E++Y +E+ K Sbjct: 154 KRGKHEALADILESIEEMRYYREHFLK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_YERE8 (Oligoribonuclease OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=orn PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.505e-30 Identity = 69/152 (45.39%), Postives = 90/152 (59.21%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H SGL E+V S + +AE Q +EF+K+ V T + GNSV D FL +YMP+L + F + +DVS++K L W P L FK+ T Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYFHYRYLDVSTLKELARRWKPEIL--AGFKKQNT 157 HSP 2 Score: 30.0314 bits (66), Expect = 1.505e-30 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K+ H+AL+DI+ES+ EL Y +E+ + Sbjct: 154 KQNTHQALDDIRESVAELAYYREHFIQ 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_RHOSR (Oligoribonuclease OS=Rhodococcus sp. (strain RHA1) GN=orn PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.955e-30 Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPR 640 LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE SGLT++V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL + + ++DVSSIK L WYPR Sbjct: 5 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHENSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTYLHYRMIDVSSIKELSRRWYPR 145 HSP 2 Score: 34.2686 bits (77), Expect = 1.955e-30 Identity = 18/33 (54.55%), Postives = 21/33 (63.64%), Query Frame = 3 Query: 642 IYRKFPSKEQKHRALNDIKESIMELKY*QENIF 740 IY P K HRAL DI+ESI ELKY ++ F Sbjct: 146 IYFGQPEKGLAHRALADIRESIRELKYYRKTAF 178
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ACIAD (Oligoribonuclease OS=Acinetobacter sp. (strain ADP1) GN=orn PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.959e-30 Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ L++M EW H SGL E+V S LT R+ E Q +EF+KK V T + GNS+ D F+ + MP+L F + +DVSS+K L W P Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNIVAEGPVLAVHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTARDVELQTLEFLKKWVNPKTSPMCGNSICQDRRFMHRLMPELEQYFHYRNLDVSSVKELAKRWRP 147 HSP 2 Score: 30.4166 bits (67), Expect = 1.959e-30 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFKTN 749 K H A++DI++SI ELKY +E F N Sbjct: 155 KNASHLAMDDIRDSISELKYYREYFFIKN 183
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_RALSO (Oligoribonuclease OS=Ralstonia solanacearum GN=orn PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.539e-30 Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 LVW+D+EMTGL E DRI+E+A ++TD +L EGP LVIHQ E LD M W + H SGL +KV S TE +AE +++F+KK V + GNS+ D F+ +YMP L + F + +DVS++K LC W P Sbjct: 30 LVWLDMEMTGLSPENDRIIEVAMVVTDSELNVLAEGPVLVIHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVSTLKELCKRWQP 168 HSP 2 Score: 26.9498 bits (58), Expect = 2.539e-30 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K Q+H A DI ESI EL+Y +++ + Sbjct: 176 KRQQHTAYADIVESIEELRYYRQHFIR 202 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |