DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_VIBCH (Oligoribonuclease OS=Vibrio cholerae GN=orn PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.553e-30 Identity = 65/146 (44.52%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEIS 658 L+WIDLEMTGL E+ +I+E+A I+TD +L EGP + IHQ + L M EWC H ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F + +DVS+IK L W P L+E S Sbjct: 8 LIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFS 153 HSP 2 Score: 32.3426 bits (72), Expect = 2.553e-30 Identity = 16/35 (45.71%), Postives = 26/35 (74.29%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E+ ++F SK H AL+DI+ESI EL++ ++ +FK Sbjct: 147 EVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_VIBC3 (Oligoribonuclease OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=orn PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.553e-30 Identity = 65/146 (44.52%), Postives = 88/146 (60.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEIS 658 L+WIDLEMTGL E+ +I+E+A I+TD +L EGP + IHQ + L M EWC H ASGL +V S ++E EA Q + F+K+ V + GNS+ D FL K+MP L + F + +DVS+IK L W P L+E S Sbjct: 8 LIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFS 153 HSP 2 Score: 32.3426 bits (72), Expect = 2.553e-30 Identity = 16/35 (45.71%), Postives = 26/35 (74.29%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E+ ++F SK H AL+DI+ESI EL++ ++ +FK Sbjct: 147 EVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PHOLL (Oligoribonuclease OS=Photorhabdus luminescens subsp. laumondii GN=orn PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.324e-30 Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 L+WIDLEMTGL E DRI+EIA I+TD L EGP + +HQ+ E L M +W H SGL E+V S + +REAEK +EF++K V + GNSV D FL +YMP+L + F + +DVS++K L W P L + + T Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILDEGPVIAVHQSDEQLALMDKWNVRTHTGSGLVERVKASKIDDREAEKATIEFLEKWVPAGASPICGNSVSQDRRFLFRYMPELEAYFHYRYLDVSTLKELARRWKPEILAGLKKQNT 157 HSP 2 Score: 30.0314 bits (66), Expect = 3.324e-30 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K+ H+AL+DI+ES+ EL Y +E+ + Sbjct: 154 KQNTHQALDDIRESVAELAYYREHFIQ 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_MARAV (Oligoribonuclease OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=orn PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.416e-30 Identity = 68/145 (46.90%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEI 655 L+WIDLEMTGL E +RI+E+A IITD +L EGP + IHQ L+ M EWC H ASGLT++V S ++E EAE+Q +EF+ K++ L GNS+ D FL KYMP L + F + +DVS++K L W P L+ + Sbjct: 7 LIWIDLEMTGLDPEQERIIEMASIITDSQLNIVAEGPVIAIHQPDSLLEQMDEWCTRTHGASGLTQRVKESTISEAEAEQQTLEFLGKHLEPGQSPLCGNSIGQDRRFLVKYMPKLEAFFHYRNLDVSTVKELARRWRPDVLEGV 151
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ECOLI (Oligoribonuclease OS=Escherichia coli (strain K12) GN=orn PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 5.636e-30 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDL 646 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W P L Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEIL 149 HSP 2 Score: 30.4166 bits (67), Expect = 5.636e-30 Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 +K+ H+A++DI+ES+ EL Y +E+ K Sbjct: 153 TKQGTHQAMDDIRESVAELAYYREHFIK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ECOL6 (Oligoribonuclease OS=Escherichia coli O6 GN=orn PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 5.636e-30 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDL 646 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W P L Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEIL 149 HSP 2 Score: 30.4166 bits (67), Expect = 5.636e-30 Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 +K+ H+A++DI+ES+ EL Y +E+ K Sbjct: 153 TKQGTHQAMDDIRESVAELAYYREHFIK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ECOHS (Oligoribonuclease OS=Escherichia coli O9:H4 (strain HS) GN=orn PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.636e-30 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDL 646 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W P L Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEIL 149 HSP 2 Score: 30.4166 bits (67), Expect = 5.636e-30 Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 +K+ H+A++DI+ES+ EL Y +E+ K Sbjct: 153 TKQGTHQAMDDIRESVAELAYYREHFIK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ECO24 (Oligoribonuclease OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=orn PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.636e-30 Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDL 646 L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H ASGL E+V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F + +DVS++K L W P L Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEIL 149 HSP 2 Score: 30.4166 bits (67), Expect = 5.636e-30 Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 +K+ H+A++DI+ES+ EL Y +E+ K Sbjct: 153 TKQGTHQAMDDIRESVAELAYYREHFIK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_SHEON (Oligoribonuclease OS=Shewanella oneidensis GN=orn PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 5.636e-30 Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRTET 676 L+WIDLEMTGL+ +VDR++EIA ++TD +L +GP + IHQ+ E L +M +W Q HH SGL E+V S + E EA Q + F+ + V + GNSV D FL +YM +L F + +DVS++K L W P + FK+ T Sbjct: 8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHGESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKRWSPETM--AGFKKQNT 157 HSP 2 Score: 33.113 bits (74), Expect = 5.636e-30 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 663 KEQKHRALNDIKESIMELKY*QENIFK 743 K+ H+AL DI+ESI EL+Y + +FK Sbjct: 154 KQNTHQALQDIQESIAELQYYRSKVFK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_SHEDO (Oligoribonuclease OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=orn PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.339e-30 Identity = 62/143 (43.36%), Postives = 88/143 (61.54%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQ 649 L+WIDLEMTGL+ EVD ++EIA ++TD +L +GP + IHQ+ E L M +W Q HH SGL ++V S TE +A +Q ++F+ + V + GNS+ D FL KYM +L F + VDVS+IK L W P ++ Sbjct: 8 LIWIDLEMTGLEPEVDVVIEIATLVTDSELNILAQGPVIAIHQSDETLAKMDDWNQKHHGQSGLIDRVKASQFTEADAIEQTIKFLAQYVPKGASPMCGNSIGQDRRFLNKYMLELEEYFHYRNVDVSTIKELVKRWSPETMK 150 HSP 2 Score: 31.5722 bits (70), Expect = 7.339e-30 Identity = 13/28 (46.43%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 +K+ H+AL DI+ESI EL++ ++ +FK Sbjct: 153 TKQGTHQALQDIQESIAELQFYRKEVFK 180 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |