DY271416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH1_MOUSE (Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus GN=Hnrnph1 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.358e-11 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + I + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH1_HUMAN (Heterogeneous nuclear ribonucleoprotein H OS=Homo sapiens GN=HNRNPH1 PE=1 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 1.358e-11 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + I + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH2_RAT (Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus GN=Hnrnph2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + + + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH2_PONAB (Heterogeneous nuclear ribonucleoprotein H2 OS=Pongo abelii GN=HNRNPH2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + + + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH2_MOUSE (Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus GN=Hnrnph2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + + + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH2_HUMAN (Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens GN=HNRNPH2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + + + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH2_BOVIN (Heterogeneous nuclear ribonucleoprotein H2 OS=Bos taurus GN=HNRNPH2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF K EIVQFF +I+ + + + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: HNRH1_RAT (Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus GN=Hnrnph1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.952e-11 Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 133 LKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 +++RGLPF + EIVQFF +I+ + I + G++TGEA+V+F S E A++A+ K K IG RY+E+F S+ Sbjct: 113 VRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSS 187
BLAST of DY271416 vs. ExPASy Swiss-Prot
Match: SYM2_CAEEL (RNA-binding protein sym-2 OS=Caenorhabditis elegans GN=sym-2 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 6.741e-11 Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 130 ILKMRGLPFSVKKSEIVQFFKDYKIIEDKIHIACRPDGKATGEAYVEFVSVEEAKRAMCKDKMTIGSRYVELFPST 357 I++MRGLP+ ++I FF+ K+ DKI R DG+ TG+A+V+F + E+A++ + K + IG RY+ELF ST Sbjct: 282 IVRMRGLPYDCTDAQIRTFFEPLKLT-DKILFITRTDGRPTGDAFVQFETEEDAQQGLLKHRQVIGQRYIELFKST 356 The following BLAST results are available for this feature:
BLAST of DY271416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271416 ID=DY271416; Name=DY271416; organism=Citrus clementina; type=EST; length=1004bpback to top |