DY271426

Overview
NameDY271426
Unique NameDY271426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length957
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.679e-11
Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 1
Query:  445 KRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPD 633
            K KN YRG+RQR WGKW AEIR P    R+WLGTF T             ++RG  AK+NFP+
Sbjct:   66 KTKNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPN 128          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.679e-11
Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  460 YRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETPAAAPK---SPVKANSPKS 687
            Y+G+RQR WGKW AEIR+P +G R+WLGTF+T             K+ G +A +N P E+  + PK   SP    +P S
Sbjct:   42 YKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLP-ESLRSYPKTASSPASQTTPSS 119          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.805e-11
Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 1
Query:  418 EQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDE 636
            E+ K++     + +Y+GIR R WGKW AEIR+P K  R+WLG++ T              +RG  A++NFP+E
Sbjct:   22 EKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEE 94          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.805e-11
Identity = 34/78 (43.59%), Postives = 41/78 (52.56%), Query Frame = 1
Query:  457 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNF---PDETPAAAPKSPVKANSP 681
            ++RG+RQRPWGKWAAEIRDP +  R+WLGTF T             ++RG  A  NF   P E        PV    P
Sbjct:  124 KFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKP 201          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 1
Query:  442 RKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPD 633
            RKR   Y+GIR R WGKW AEIR+P K  R+WLG+++T              +RG  A++NFP+
Sbjct:   24 RKRDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPE 87          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 49/168 (29.17%), Postives = 76/168 (45.24%), Query Frame = 1
Query:  421 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNF--PDETPAAAPKSPVKANSPKSLPKLALAPCN-PV*TQTSLIEHSRPEFHNLVSFPEEKHPVKQLGSMG----LFPEEGNKESKPLGPPLKTSREPQPK 903
            ++KK  + +   ++ G+R+RPWG++AAEIRDPT   R WLGTF+T              +RG +A+ NF   D  P+++  S V  + P   P     P N PV       ++S  +   L    ++       GS       +  + + E  PL   L  S   QP+
Sbjct:    7 KSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPPPPPPPAPPSNDPVDYMMMFNQYSSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQPQ 174          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana GN=ERF094 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  418 EQAKKST--ERKRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFP 630
            E+ K++T    + +  YRG+R+RPWGK+AAEIRD T KG+RVWLGTF+T              ++G  A +NFP
Sbjct:   66 EEGKEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFP 139          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 1
Query:  442 RKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDETP 642
            RKR   Y+GIR R WGKW AEIR+P K  R+WLG+++T              +RG  A++NFP+  P
Sbjct:   15 RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELLP 81          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.275e-11
Identity = 40/93 (43.01%), Postives = 49/93 (52.69%), Query Frame = 1
Query:  373 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNF---PDETP 642
            +A RK         V +   ST  K K +YRG+RQRPWGK+AAEIRDP+   R+WLGTF T              ++G KA  NF   P  TP
Sbjct:   77 TAARKGKHKEEESVVVEDDVSTSVKPK-KYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTP 168          
BLAST of DY271426 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.196e-11
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1
Query:  457 QYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXKIRGKKAKVNFPDE 636
            +YRG+R+RPWGK+AAEIRD  + G RVWLGTF T             ++RG KA +NFP E
Sbjct:   58 KYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSE 118          
The following BLAST results are available for this feature:
BLAST of DY271426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ERF56_ARATH3.679e-1150.79Ethylene-responsive transcription factor ERF056 OS... [more]
DRE2D_ARATH3.679e-1143.04Dehydration-responsive element-binding protein 2D ... [more]
RAP29_ARATH4.805e-1139.73Ethylene-responsive transcription factor RAP2-9 OS... [more]
CRF3_ARATH4.805e-1143.59Ethylene-responsive transcription factor CRF3 OS=A... [more]
RA210_ARATH6.275e-1145.31Ethylene-responsive transcription factor RAP2-10 O... [more]
LEP_ARATH6.275e-1129.17Ethylene-responsive transcription factor LEP OS=Ar... [more]
ERF94_ARATH6.275e-1145.95Ethylene-responsive transcription factor ERF094 OS... [more]
ERF10_ARATH6.275e-1144.78Ethylene-responsive transcription factor ERF010 OS... [more]
CRF6_ARATH6.275e-1143.01Ethylene-responsive transcription factor CRF6 OS=A... [more]
PTI5_SOLLC8.196e-1152.46Pathogenesis-related genes transcriptional activat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271426 ID=DY271426; Name=DY271426; organism=Citrus clementina; type=EST; length=957bp
CTGAAGAATCCATAACTCTCTCAAGCCAACAAAAGCAAATTTTACATTTA
ACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAAACCAGA
AGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCGGGCTAC
ATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGAGTATCT
CTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGCCGATCG
TCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGATGAAGAA
GAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGATGATGGC
TGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATGGATCTA
CAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGAAAGAGG
AAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATGGGCTGC
TGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAACTTTCA
ATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGGAAGATC
CGTGGGAAGAAAGCTAAGGTTAACTTTCCAGATGAAACTCCTGCTGCTGC
TCCAAAGAGCCCAGTGAAGGCCAACTCCCCGAAATCCCTTCCCAAGCTTG
CCCTAGCCCCGTGCAACCCAGTTTGAACCCAAACTTCATTAATTGAACAC
TCCCGACCAGAGTTCCACAACCTGGTGAGTTTTCCGGAGGAGAAACACCC
AGTGAAACAGTTAGGATCTATGGGCCTCTTCCCTGAGGAGGGGAATAAGG
AATCAAAACCCCTTGGGCCACCCCTTAAAACATCCAGGGAACCTCAACCC
AAAAAAGGGAATAACTTCTTTATATTGTCTACTTTTCCCTGGGTCACACT
AGCCCCC
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