DY271439

Overview
NameDY271439
Unique NameDY271439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_ECOLI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli (strain K12) GN=argD PE=1 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 1.278e-29
Identity = 78/214 (36.45%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            GFGP     + V F D+ A++ +     D     + EPIQGE GV      +L+ +R+LC ++  L++ DE+Q G+ R+G + A     V PD++   KALGGG  P+SA+L   E+     PG HGST+GGNPLA AVA A+ D+I   ++ E      +    HL KI QQ+ +   ++RG GL    E  K      A D      E G++
Sbjct:  160 GFGPKPADIIHVPFNDLHAVKAVMD---DHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGG-FPISAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQY-DVFSDIRGMGLLIGAEL-KPQYKGRARDFLYAGAEAGVM 367          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_AQUAE (Acetylornithine aminotransferase OS=Aquifex aeolicus GN=argD PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.278e-29
Identity = 76/215 (35.35%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            +GF PL+PG       DI ++ K+  E   + AG + E IQGE GV    + +L  ++++C + ++L+I DE+Q+G+ R+G   A     ++PD++ L K LGGGV P+ A+LA +EV     PG HGSTFGGNPLA       +D +  EKL      +G   ++ L ++ +       +V+GRGL   +E ++        D  LK  E+G+L
Sbjct:  146 KGFEPLVPGFSYAKLNDIDSVYKLLDE---ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGV-PIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV--EKLLPHVREVGNYFKEKLKELGK------GKVKGRGLMLGLELER-----ECKDYVLKALEKGLL 343          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_YARLI (Acetylornithine aminotransferase, mitochondrial OS=Yarrowia lipolytica GN=ARG8 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.669e-29
Identity = 75/213 (35.21%), Postives = 121/213 (56.81%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            F PL+PG     + D  A + I +++     G + EP+QGE GV    D +L+A+R+ C +   ++I DEIQ GL R+GR+ A D  +V PD++ + KALG G  P+ A +  + V   I  G+HG+T+GGNPLAS V    L  +  +++ +    + +++R  + ++Q++FP  + EVRG GL   ++F K    V A       +E G+L
Sbjct:  171 FAPLVPGVKTGVYNDPKAADLITEKT----CGVIVEPVQGEGGVYKANDEFLQALRNKCDEVGAMLIFDEIQCGLGRTGRLWAHD--KVHPDILTMAKALGNG-FPIGATMVTEAVADKIAIGDHGTTYGGNPLASRVGHYVLSQVASKEVLDNVKKVSQQIRDAVAEVQEEFPELITEVRGDGLLLGIQFSKDPSKVVA-----AARENGLL 371          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_PASMU (Acetylornithine aminotransferase OS=Pasteurella multocida GN=argD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.669e-29
Identity = 73/191 (38.22%), Postives = 108/191 (56.54%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 585
            GFGP     + V F D+ A++ +  E+       + EPIQGE+G++     +L+ +R+LC ++N L+I DE+Q+G+ R+G + A    EV PD++   KALG G  P+ A+L   E+     PG HG+TFGGNPLA AVA   +D+I      ++     E+  Q L +I QQ     KE+RG GL    E
Sbjct:  156 GFGPKPADIVHVPFNDLAAVQAVMDEN---TCAVIVEPIQGESGILPASQDFLQGLRELCDQHNALLIFDEVQTGVGRTGYLYAYMKYEVVPDILTSAKALGNG-FPIGAMLTTHEIAKSFAPGVHGTTFGGNPLACAVAEKVIDIISAPPFLQKIQRTSEKFMQKLQEINQQC-GLFKEIRGEGLLIGAE 341          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARUC_PSEAE (Succinylornithine transaminase/acetylornithine aminotransferase OS=Pseudomonas aeruginosa GN=aruC PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.847e-29
Identity = 74/186 (39.78%), Postives = 105/186 (56.45%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL 570
            GFGP   G   V + D+ AL+       D+    + EPIQGE GV+     YL+  R LC ++N L++ DE+QSG+ R G + A     V PD++   K+LGGG  P+ A+L   E+   +  G HG+T+GGNPLASAVA A+LDVI   ++ +      E  +  L KI Q++     E+RG GL
Sbjct:  160 GFGPKFEGITHVPYNDLEALKAAIS---DKTCAVVLEPIQGEGGVLPAQQAYLEGARKLCDEHNALLVFDEVQSGMGRVGELFAYMHYGVVPDILSSAKSLGGG-FPIGAMLTTGEIAKHLSVGTHGTTYGGNPLASAVAEAALDVINTPEVLDGVKAKHERFKSRLQKIGQEY-GIFDEIRGMGL 340          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_SALTY (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhimurium GN=argD PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 2.847e-29
Identity = 79/214 (36.92%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            GFGP     + V F D+ A++ +     D     + EPIQGE GV      +LK +RDLC ++  L++ DE+Q G+ R+G + A     V PD++   KALGGG  PVSA+L  +E+      G HGST+GGNPLA AVA A+ D+I   ++ +      ++  QHL  I +QF +   ++RG GL    E  K      A D      E G++
Sbjct:  160 GFGPKPADIIHVPFNDLHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGG-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQF-DIFSDIRGMGLLIGAEL-KPKYKGRARDFLYAGAEAGVM 367          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_PYRKO (Acetylornithine aminotransferase OS=Pyrococcus kodakaraensis GN=argD PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.847e-29
Identity = 85/215 (39.53%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITAL-EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            GFGPL+PG   + F ++ A  E I KE+    A  +FEPIQGE G++   + ++K +RDL      L+IADE+QSGL R+G+ LA +   VRPD+V +GK +G G  PVS  L D E    I  G+HGSTFGGNPLA      +L ++R ++L E++            K  +     V + RGRGL   +      L   A +    ++ERGIL
Sbjct:  136 GFGPLVPGFKHIPFNNVEAAKEAITKET----AAVIFEPIQGEGGIVPADEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYGVRPDIVTMGKGIGNG-FPVSLTLTDLE----IPRGKHGSTFGGNPLACRAVATTLRILRRDRLVEKAGE----------KFMEFSGERVVKTRGRGLMIGI-----VLRRPAGNYVKALQERGIL 325          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_PROMA (Acetylornithine aminotransferase OS=Prochlorococcus marinus GN=argD PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.857e-29
Identity = 74/214 (34.58%), Postives = 118/214 (55.14%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFK---ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 642
            +GF PL+ G     F D  +++ +++   +   ++A  L EPIQGE G+ +    +   +RD C+K NIL++ DE+QSG+ R+G++   +   V PD   L K LGGG   + A+L  KE     +PG+H STFGGNP A    +     I++  L E +   G +LR+ L K+   +P++++EVRG GL   +   K +   S   + L +KE
Sbjct:  167 KGFEPLVEGFEFFSFNDSNSVQDLYENLEKDEPRVAAILIEPIQGEGGLNLGDQKFFYFLRDYCNKNNILLLFDEVQSGMGRTGKLWGYEHFNVEPDAFTLAKGLGGG-HSIGALLV-KENASIFEPGDHASTFGGNPFACKAGLTVAKEIQNRNLLENTYCRGNQLREGLQKLINNYPHHLEEVRGIGLMLGLAIKKNSNLTSQKIVELAIKE 378          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_NEIMB (Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup B GN=argD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.343e-29
Identity = 71/195 (36.41%), Postives = 108/195 (55.38%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 594
            + + PL  G   V F DI ALE      G+Q    + EPIQGE+G++     YL+  R LC ++N L+I DE+Q+G+  +GR+ A +   + PD++   KALG G  P+ A+LA +++    QPG HGSTFGGNP+A AV   + D+I   +        G++L+  L  + ++      +VRG GL      D+
Sbjct:  147 KDYAPLPQGITHVPFNDIAALEAAV---GEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQTGMGHTGRLFAYEHYGIVPDILSSAKALGCG-FPIGAMLATEKIAAAFQPGTHGSTFGGNPMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLCRK-TGLFSQVRGMGLLLGCVLDE 336          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_METAC (Acetylornithine aminotransferase OS=Methanosarcina acetivorans GN=argD PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 8.285e-29
Identity = 74/180 (41.11%), Postives = 104/180 (57.78%), Query Frame = 1
Query:   46 VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 585
            V + D  A+ +   E+    A  + EPIQGE G+ IP  GYLK VR++C +   L+I DE+Q+G  R+G     +   V PD++ + KA+GGG  P+ A+ A   +      G+H STFGG PLA A A+AS+ VIR+EKL ERS  +G    +   K+     + V EVRG+GL   VE
Sbjct:  175 VPYSDAEAIRQAISEN---TAAVILEPIQGEGGINIPDPGYLKEVREICDETGALLIFDEVQTGFGRTGTWFCKEQFGVEPDIMSMSKAIGGG-FPMGAIAAHNGIN--FGRGQHASTFGGGPLACAAALASVKVIREEKLLERSKEMGAYFMK---KLAGMVRDDVVEVRGKGLMIGVE 345          
The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGD_ECOLI1.278e-2936.45Acetylornithine/succinyldiaminopimelate aminotrans... [more]
ARGD_AQUAE1.278e-2935.35Acetylornithine aminotransferase OS=Aquifex aeolic... [more]
ARGD_YARLI1.669e-2935.21Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD_PASMU1.669e-2938.22Acetylornithine aminotransferase OS=Pasteurella mu... [more]
ARUC_PSEAE2.847e-2939.78Succinylornithine transaminase/acetylornithine ami... [more]
ARGD_SALTY2.847e-2936.92Acetylornithine/succinyldiaminopimelate aminotrans... [more]
ARGD_PYRKO2.847e-2939.53Acetylornithine aminotransferase OS=Pyrococcus kod... [more]
ARGD_PROMA4.857e-2934.58Acetylornithine aminotransferase OS=Prochlorococcu... [more]
ARGD_NEIMB6.343e-2936.41Acetylornithine aminotransferase OS=Neisseria meni... [more]
ARGD_METAC8.285e-2941.11Acetylornithine aminotransferase OS=Methanosarcina... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bp
GAGGCCATTCGTGGTTTTGGACCATTGTTACCTGGCCATCTTAAGGTTGA
TTTTGGTGATATAACTGCTCTAGAGAAAATCTTTAAAGAAAGTGGAGATC
AAATAGCTGGATTTCTTTTTGAACCAATTCAAGGAGAGGCTGGGGTTATA
ATTCCTCCAGATGGTTACTTGAAAGCTGTTAGAGATCTTTGCTCAAAGTA
TAACATCTTAATGATTGCTGATGAGATACAGAGTGGTTTAGCACGATCTG
GAAGAATGTTGGCCTCTGATTGGGAAGAAGTTCGCCCTGATATGGTGATA
CTAGGAAAGGCATTGGGTGGTGGAGTCATACCTGTCAGTGCAGTGCTTGC
AGACAAAGAAGTGATGCTTTGCATTCAACCTGGAGAGCATGGAAGCACCT
TCGGCGGAAATCCTTTGGCCAGTGCGGTGGCTATTGCCTCGCTGGATGTG
ATCAGAGATGAGAAACTTGCAGAGAGATCAGCGCATTTGGGAGAAGAGCT
CAGACAGCATCTTTTTAAAATTCAGCAGCAATTTCCAAACTACGTTAAAG
AGGTTCGAGGAAGAGGTTTGTTCAATGCCGTGGAGTTTGACAAGACGGCA
TTGCCTGTTTCTGCATATGACATCTGTCTAAAGATGAAGGAAAGGGGCAT
CCTTGCCTAACCCACTCCATGATACAATAGTCCCGGTTAACTCCCCCCCT
CTCCATAAATTCAATTGACCTCCAGAAGGGTCAAAGGCGCTGCATGAAGT
TTTGGAACTTGACCTGCCCAAAAAGCCGAAACCCCAACCCAGCAAAGCCC
CTGCCACCCCATGTTCCCGTTGTGGCAAAAATTAATAGGGCATAAAAATT
TAATAAATTCCCAATTCTTCCCCCCGGCAAGCCCAATTTCCCTCCCAACC
CCCTTGTTATCAAAACTTCTTGCCGTATG
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