DY271439

Overview
NameDY271439
Unique NameDY271439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig522 contig Ccv1_Contig522:248..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BOVIN (Ornithine aminotransferase, mitochondrial OS=Bos taurus GN=OAT PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.449e-57
Identity = 113/218 (51.83%), Postives = 155/218 (71.10%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA*PT 666
            GFGP +PG   + + D+ ALE+  ++    +A F+ EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D E VRPD+V+LGKAL GG+ PVSAVL D E+ML I+PGEHGST+GGNPL   VAIA+L+V+ +E LAE +  +G  LR  L K+     + V  VRG+GL NA+   +T     A+ +CL++++ G+LA PT
Sbjct:  196 GFGPFMPGFEIIPYNDLPALERALQDPN--VAAFMVEPIQGEAGVVVPDPGYLVGVRELCTQHQVLFIADEIQTGLARTGRWLAIDHENVRPDIVLLGKALSGGLYPVSAVLCDDEIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENAEKMGIILRNELMKLPS---DVVTTVRGKGLLNAIVIRETK-DCDAWKVCLRLRDNGLLAKPT 407          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_OCEIH (Ornithine aminotransferase OS=Oceanobacillus iheyensis GN=rocD PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.602e-56
Identity = 113/218 (51.83%), Postives = 152/218 (69.72%), Query Frame = 1
Query:    1 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            +A + +GP +PG  KV +GDI A+EK   E+    A  + EPIQGEAG+IIPP+GYLK VR+LCS+ NIL IADE+Q+G AR+G+M A +WE V PD+ ++GKALGGGV PVSA+ A+ E+M    PG HGSTFGGNPLA AV++A++DVI +E L  +S   G+     L  +  +    +KEVR RGLF  +EF +   PV   +IC K+K++GIL
Sbjct:  157 DATKNYGPFVPGINKVSYGDINAIEKAITEN---TAAIILEPIQGEAGIIIPPEGYLKKVRELCSEKNILFIADEVQTGFARTGKMFACEWENVEPDIYVMGKALGGGVFPVSAIAANNEIMDVFTPGSHGSTFGGNPLACAVSMAAIDVIEEENLVNKSLESGKYFADKLRAVNFE---GIKEVRARGLFIGMEFHQ---PVR--EICEKLKDKGIL 363          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_EMENI (Ornithine aminotransferase OS=Emericella nidulans GN=otaA PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.732e-56
Identity = 106/222 (47.75%), Postives = 157/222 (70.72%), Query Frame = 1
Query:    7 IRGFGPLLPGHLK-VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKERGILA*PT 666
            +   G  +PG  K + + D  AL + F+++G  +A FL EPIQGEAG+I+P D YL+  R LC ++N+L+I DEIQ+G+AR+G++L  +W  ++PDMV+LGKA+ GG+ PVS VL  K+VML ++PG HGST+GGNPLA AVAI +L+V+++E + ER+  LG+  R  L  IQ      ++ VRG+GL NA+  D++     +A+D+C+ MKE+G+LA PT
Sbjct:  179 VPNIGCTIPGTEKPITYNDKAALREAFEKAGSNLAAFLVEPIQGEAGIIVPDDDYLQLARSLCDQHNVLLICDEIQTGIARTGKLLCHEWSGIKPDMVLLGKAISGGMYPVSCVLGRKDVMLTVEPGTHGSTYGGNPLACAVAIRALEVVQEENMVERAEKLGQAFRSGLEAIQNPI---IQTVRGKGLLNAIVIDESKTNGHTAWDLCMLMKEKGLLAKPT 397          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_CAEEL (Probable ornithine aminotransferase, mitochondrial OS=Caenorhabditis elegans GN=C16A3.10 PE=2 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 4.661e-56
Identity = 112/214 (52.34%), Postives = 151/214 (70.56%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 657
            FGP +PG   V + ++ A+E   K+    +A F+ EPIQGEAGV++P  GYLK V DLC KYN+L I DE+QSGL RSG++LA   + VRPD+V+LGKAL GG  PVSAVL D  VM+ I+PGEHGST+GGNPLA  VAIA+L+++++EKL E SA +G+ L   + K++    + V  VRG+GLF A+  +K      A+ +CLK+KE G+LA
Sbjct:  178 FGPFVPGFKTVPYNNLKAVEDAIKDKN--VAAFMVEPIQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSGLGRSGKLLAHYHDNVRPDIVVLGKALSGGFYPVSAVLCDDNVMMNIKPGEHGSTYGGNPLACKVAIAALEILQEEKLVENSAVMGDLL---MSKLKTLPKDIVSTVRGKGLFCAIVINK---KYDAWKVCLKLKENGLLA 383          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BREBN (Ornithine aminotransferase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rocD PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.771e-55
Identity = 108/215 (50.23%), Postives = 145/215 (67.44%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP  PG   + +GDI AL++    +    A F+ EPIQGEAG+IIP +G+LK  +++C   N+L+++DEIQ+G  R+G+M ASDWE V PDM I+GKALGGGV P+SAV ADKE++   +PG HGSTFGGNPL  AVA+A++DV+ DE L +RS  +G    + L +I       +KE+RGRGLF  +E    A P      C K+KE G+L
Sbjct:  159 RGFGPFTPGFKIIPYGDIEALKQAITPN---TAAFMLEPIQGEAGIIIPQEGFLKQAQEVCKANNVLLVSDEIQTGFGRTGKMFASDWENVVPDMYIMGKALGGGVFPISAVAADKEILSVFEPGSHGSTFGGNPLGCAVAVAAMDVLADEGLVQRSLEMGAYFMEKLKEINNPI---IKEIRGRGLFIGLELTTAARP-----YCEKLKELGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACCR (Ornithine aminotransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rocD PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.790e-55
Identity = 108/215 (50.23%), Postives = 149/215 (69.30%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG + + +GD+ AL+     +    A F+ EPIQGEAG+ IPP GYLK   ++C K N+L +ADEIQ+GL+R+G++ A DW+ V PDM ILGKALGGGV P+S V A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  G+L
Sbjct:  159 RGFGPMLPGIVVIPYGDLEALKAAITPN---TAAFILEPIQGEAGINIPPAGYLKEAFEVCKKENVLFVADEIQTGLSRTGKVFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARP-----YCEQLKAAGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACHD (Ornithine aminotransferase OS=Bacillus halodurans GN=rocD PE=3 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.958e-54
Identity = 113/215 (52.56%), Postives = 146/215 (67.91%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG   + +GD+ AL+          A FL EPIQGEAG+ IP +G+LK    LC + N+L IADEIQSGL RSG+  A DWE+V+PDM ILGKALGGGV P+S V AD++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS   G  L   L K+++     +K+VRGRGLF  VE  +   P   Y  C ++KE G+L
Sbjct:  160 RGFGPMLPGIKVIPYGDLEALKAAITS---HTAAFLVEPIQGEAGIRIPQEGFLKEAYALCKRENVLFIADEIQSGLGRSGKWFACDWEDVKPDMYILGKALGGGVFPISVVCADRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLVERSYEYGNYL---LTKLKEIDNPIIKDVRGRGLFIGVELHE---PARKY--CEQLKEEGLL 363          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACC3 (Ornithine aminotransferase OS=Bacillus cereus (strain 03BB102) GN=rocD PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.958e-54
Identity = 107/215 (49.77%), Postives = 148/215 (68.84%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG + + +GD+ AL+     +    A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V PDM ILGKALGGGV P+S V A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  G+L
Sbjct:  159 RGFGPMLPGIIVIPYGDLEALKAAITPN---TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARP-----YCEQLKAAGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_SCHPO (Probable ornithine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC21C3.08c PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.214e-54
Identity = 110/218 (50.46%), Postives = 156/218 (71.56%), Query Frame = 1
Query:   19 GPLLPGHLKV-DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKERGILA*PT 666
            GP + G  +V  + +I  L+      G ++A FL EPIQGEAGV++P DGYL+    LC  +N+L IADE+Q+G+AR+G+ML  +   V+PD+VILGKA+ GGV PVSAVL+ +E+ML  +PG HGST+GGNPL +AV+IA+L+V+++EKL ER+A LGE+ R  L + +      V++VRGRGL NAV  D++     +A+D+CL M+ RG+LA PT
Sbjct:  178 GPKISGADRVLRYNNIEDLKYYLDTFGPKVAAFLVEPIQGEAGVMVPDDGYLEEAYKLCKAHNVLFIADEVQTGVARTGKMLCIEHSNVKPDVVILGKAISGGVYPVSAVLSSREIMLNFEPGTHGSTYGGNPLGAAVSIAALEVVKEEKLTERAAVLGEKFRTALIECKSPI---VQKVRGRGLLNAVVIDESKTNGRTAWDLCLIMRSRGVLAKPT 392          

HSP 2 Score: 22.7126 bits (47), Expect = 2.214e-54
Identity = 14/40 (35.00%), Postives = 16/40 (40.00%), Query Frame = 3
Query:  684 RLTPPLSINSIDLQKGQRRCMKFWNLTCPKSRNPNPAKPL 803
            R +PPL I   DL KG     K  N        P   KP+
Sbjct:  398 RFSPPLVITEEDLMKGIEVIKKSLNDLPTIDMTPYAEKPI 437          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACCQ (Ornithine aminotransferase OS=Bacillus cereus (strain Q1) GN=rocD PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.362e-54
Identity = 107/215 (49.77%), Postives = 148/215 (68.84%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG + + +GD+ AL+     +    A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V PDM ILGKALGGGV P+S V A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  G+L
Sbjct:  159 RGFGPMLPGIVVIPYGDLEALKAAITPN---TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDGVTPDMYILGKALGGGVFPISCVAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARP-----YCEQLKAAGLL 362          
The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OAT_BOVIN1.449e-5751.83Ornithine aminotransferase, mitochondrial OS=Bos t... [more]
OAT_OCEIH1.602e-5651.83Ornithine aminotransferase OS=Oceanobacillus iheye... [more]
OAT_EMENI2.732e-5647.75Ornithine aminotransferase OS=Emericella nidulans ... [more]
OAT_CAEEL4.661e-5652.34Probable ornithine aminotransferase, mitochondrial... [more]
OAT_BREBN1.771e-5550.23Ornithine aminotransferase OS=Brevibacillus brevis... [more]
OAT_BACCR8.790e-5550.23Ornithine aminotransferase OS=Bacillus cereus (str... [more]
OAT_BACHD1.958e-5452.56Ornithine aminotransferase OS=Bacillus halodurans ... [more]
OAT_BACC31.958e-5449.77Ornithine aminotransferase OS=Bacillus cereus (str... [more]
OAT_SCHPO2.214e-5450.46Probable ornithine aminotransferase OS=Schizosacch... [more]
OAT_BACCQ4.362e-5449.77Ornithine aminotransferase OS=Bacillus cereus (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bp
GAGGCCATTCGTGGTTTTGGACCATTGTTACCTGGCCATCTTAAGGTTGA
TTTTGGTGATATAACTGCTCTAGAGAAAATCTTTAAAGAAAGTGGAGATC
AAATAGCTGGATTTCTTTTTGAACCAATTCAAGGAGAGGCTGGGGTTATA
ATTCCTCCAGATGGTTACTTGAAAGCTGTTAGAGATCTTTGCTCAAAGTA
TAACATCTTAATGATTGCTGATGAGATACAGAGTGGTTTAGCACGATCTG
GAAGAATGTTGGCCTCTGATTGGGAAGAAGTTCGCCCTGATATGGTGATA
CTAGGAAAGGCATTGGGTGGTGGAGTCATACCTGTCAGTGCAGTGCTTGC
AGACAAAGAAGTGATGCTTTGCATTCAACCTGGAGAGCATGGAAGCACCT
TCGGCGGAAATCCTTTGGCCAGTGCGGTGGCTATTGCCTCGCTGGATGTG
ATCAGAGATGAGAAACTTGCAGAGAGATCAGCGCATTTGGGAGAAGAGCT
CAGACAGCATCTTTTTAAAATTCAGCAGCAATTTCCAAACTACGTTAAAG
AGGTTCGAGGAAGAGGTTTGTTCAATGCCGTGGAGTTTGACAAGACGGCA
TTGCCTGTTTCTGCATATGACATCTGTCTAAAGATGAAGGAAAGGGGCAT
CCTTGCCTAACCCACTCCATGATACAATAGTCCCGGTTAACTCCCCCCCT
CTCCATAAATTCAATTGACCTCCAGAAGGGTCAAAGGCGCTGCATGAAGT
TTTGGAACTTGACCTGCCCAAAAAGCCGAAACCCCAACCCAGCAAAGCCC
CTGCCACCCCATGTTCCCGTTGTGGCAAAAATTAATAGGGCATAAAAATT
TAATAAATTCCCAATTCTTCCCCCCGGCAAGCCCAATTTCCCTCCCAACC
CCCTTGTTATCAAAACTTCTTGCCGTATG
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