DY271439

Overview
NameDY271439
Unique NameDY271439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig522 contig Ccv1_Contig522:248..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACAN (Ornithine aminotransferase OS=Bacillus anthracis GN=rocD PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 106/215 (49.30%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG + + +GD+ AL+     +    A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V PDM ILGKALGGGV P+S   A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  G+L
Sbjct:  159 RGFGPMLPGIIVIPYGDLEALKAAITPN---TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARP-----YCEQLKAAGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACAC (Ornithine aminotransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rocD PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 106/215 (49.30%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG + + +GD+ AL+     +    A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V PDM ILGKALGGGV P+S   A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  G+L
Sbjct:  159 RGFGPMLPGIIVIPYGDLEALKAAITPN---TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARP-----YCEQLKAAGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BACAA (Ornithine aminotransferase OS=Bacillus anthracis (strain A0248) GN=rocD PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.697e-54
Identity = 106/215 (49.30%), Postives = 147/215 (68.37%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RGFGP+LPG + + +GD+ AL+     +    A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V PDM ILGKALGGGV P+S   A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EKL ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  G+L
Sbjct:  159 RGFGPMLPGIIVIPYGDLEALKAAITPN---TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARP-----YCEQLKAAGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAS1 (Ornithine aminotransferase 1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.718e-54
Identity = 107/215 (49.77%), Postives = 149/215 (69.30%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            +GFGPLL      DFGDI  L+K+     +Q    + EPIQGE GV IPP  +++ VR LC++YN+L+IADEIQ GL R+G+M A +WE   PD+ +LGK+LGGG+ P+SAVLA+++VM  + PG HGSTFGGNPLA AV++A+LDV+ +E L + +  LG+ L +HL +I+ +    + EVRGRGLF  +E     L V+A D C +M  +G+L
Sbjct:  156 KGFGPLLNNIHYADFGDIEQLKKLIN---NQTTAIILEPIQGEGGVNIPPTHFIQEVRQLCNEYNVLLIADEIQVGLGRTGKMFAMEWENTEPDIYLLGKSLGGGLYPISAVLANQDVMSVLTPGTHGSTFGGNPLACAVSMAALDVLNEEHLVQNALDLGDRLLKHLQQIESEL---IVEVRGRGLFIGIE-----LNVAAQDYCEQMINKGVL 359          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAAN (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain N315) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.718e-54
Identity = 111/198 (56.06%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 606
            GF PLL G   VDFGDI   E++ +      A  + EPIQGE GV IPP GY++AVR LC K+ ILMIADEIQ GL R+G+  A +WE+V PD+ ILGKALGGG+ PVSAVLA+ +VM  + PG HGSTFGGNPLA A++ A+LDV++DE+L ERS  LG  L + L  +Q + P+ +KE+RGRGLF  +E +  A P
Sbjct:  157 GFHPLLQGTTTVDFGDI---EQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILMIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKAL--LQLKHPS-IKEIRGRGLFIGIELNTDAAP 348          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAAM (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.718e-54
Identity = 111/198 (56.06%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 606
            GF PLL G   VDFGDI   E++ +      A  + EPIQGE GV IPP GY++AVR LC K+ ILMIADEIQ GL R+G+  A +WE+V PD+ ILGKALGGG+ PVSAVLA+ +VM  + PG HGSTFGGNPLA A++ A+LDV++DE+L ERS  LG  L + L  +Q + P+ +KE+RGRGLF  +E +  A P
Sbjct:  157 GFHPLLQGTTTVDFGDI---EQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILMIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKAL--LQLKHPS-IKEIRGRGLFIGIELNTDAAP 348          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_PLAFD (Ornithine aminotransferase OS=Plasmodium falciparum (isolate CDC / Honduras) GN=OAT PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.269e-53
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            FGP +P  LKV + D+ ALEK  ++    +  F+ EP+QGEAGVI+P D Y   V  LC KYN+L +ADE+Q+GL R+G++L +    V+PD+++LGKAL GG  P+SA+LA+ +VML ++PGEHGST+GGNPLA+A+ + +L V+ +EKL E +  LG    Q+L K Q +    V+EVRG+GL  A+EF      V+ +DICLK KE G++
Sbjct:  167 FGPFVPNFLKVPYDDLEALEKELQDPN--VCAFIVEPVQGEAGVIVPSDSYFPGVASLCKKYNVLFVADEVQTGLGRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLVLKPGEHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNL-KEQLKDSKVVREVRGKGLLCAIEFKNDL--VNVWDICLKFKENGLI 374          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_PLAF7 (Ornithine aminotransferase OS=Plasmodium falciparum (isolate 3D7) GN=OAT PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.269e-53
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            FGP +P  LKV + D+ ALEK  ++    +  F+ EP+QGEAGVI+P D Y   V  LC KYN+L +ADE+Q+GL R+G++L +    V+PD+++LGKAL GG  P+SA+LA+ +VML ++PGEHGST+GGNPLA+A+ + +L V+ +EKL E +  LG    Q+L K Q +    V+EVRG+GL  A+EF      V+ +DICLK KE G++
Sbjct:  167 FGPFVPNFLKVPYDDLEALEKELQDPN--VCAFIVEPVQGEAGVIVPSDSYFPGVASLCKKYNVLFVADEVQTGLGRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLVLKPGEHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNL-KEQLKDSKVVREVRGKGLLCAIEFKNDL--VNVWDICLKFKENGLI 374          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAAW (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain MW2) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.165e-53
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 606
            GF PLL G   VDFGDI   E++ +      A  + EPIQGE GV IPP GY++AVR LC K+ IL+IADEIQ GL R+G+  A +WE+V PD+ ILGKALGGG+ PVSAVLA+ +VM  + PG HGSTFGGNPLA A++ A+LDV++DE+L ERS  LG  L + L  +Q + P+ +KE+RGRGLF  +E +  A P
Sbjct:  157 GFHPLLQGTTTVDFGDI---EQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKAL--LQLKHPS-IKEIRGRGLFIGIELNTDAAP 348          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAAS (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain MSSA476) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.165e-53
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 606
            GF PLL G   VDFGDI   E++ +      A  + EPIQGE GV IPP GY++AVR LC K+ IL+IADEIQ GL R+G+  A +WE+V PD+ ILGKALGGG+ PVSAVLA+ +VM  + PG HGSTFGGNPLA A++ A+LDV++DE+L ERS  LG  L + L  +Q + P+ +KE+RGRGLF  +E +  A P
Sbjct:  157 GFHPLLQGTTTVDFGDI---EQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKAL--LQLKHPS-IKEIRGRGLFIGIELNTDAAP 348          
The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OAT_BACAN5.697e-5449.30Ornithine aminotransferase OS=Bacillus anthracis G... [more]
OAT_BACAC5.697e-5449.30Ornithine aminotransferase OS=Bacillus anthracis (... [more]
OAT_BACAA5.697e-5449.30Ornithine aminotransferase OS=Bacillus anthracis (... [more]
OAT1_STAS19.718e-5449.77Ornithine aminotransferase 1 OS=Staphylococcus sap... [more]
OAT1_STAAN9.718e-5456.06Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]
OAT1_STAAM9.718e-5456.06Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]
OAT_PLAFD1.269e-5348.83Ornithine aminotransferase OS=Plasmodium falciparu... [more]
OAT_PLAF71.269e-5348.83Ornithine aminotransferase OS=Plasmodium falciparu... [more]
OAT1_STAAW2.165e-5355.56Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]
OAT1_STAAS2.165e-5355.56Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP9YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bp
GAGGCCATTCGTGGTTTTGGACCATTGTTACCTGGCCATCTTAAGGTTGA
TTTTGGTGATATAACTGCTCTAGAGAAAATCTTTAAAGAAAGTGGAGATC
AAATAGCTGGATTTCTTTTTGAACCAATTCAAGGAGAGGCTGGGGTTATA
ATTCCTCCAGATGGTTACTTGAAAGCTGTTAGAGATCTTTGCTCAAAGTA
TAACATCTTAATGATTGCTGATGAGATACAGAGTGGTTTAGCACGATCTG
GAAGAATGTTGGCCTCTGATTGGGAAGAAGTTCGCCCTGATATGGTGATA
CTAGGAAAGGCATTGGGTGGTGGAGTCATACCTGTCAGTGCAGTGCTTGC
AGACAAAGAAGTGATGCTTTGCATTCAACCTGGAGAGCATGGAAGCACCT
TCGGCGGAAATCCTTTGGCCAGTGCGGTGGCTATTGCCTCGCTGGATGTG
ATCAGAGATGAGAAACTTGCAGAGAGATCAGCGCATTTGGGAGAAGAGCT
CAGACAGCATCTTTTTAAAATTCAGCAGCAATTTCCAAACTACGTTAAAG
AGGTTCGAGGAAGAGGTTTGTTCAATGCCGTGGAGTTTGACAAGACGGCA
TTGCCTGTTTCTGCATATGACATCTGTCTAAAGATGAAGGAAAGGGGCAT
CCTTGCCTAACCCACTCCATGATACAATAGTCCCGGTTAACTCCCCCCCT
CTCCATAAATTCAATTGACCTCCAGAAGGGTCAAAGGCGCTGCATGAAGT
TTTGGAACTTGACCTGCCCAAAAAGCCGAAACCCCAACCCAGCAAAGCCC
CTGCCACCCCATGTTCCCGTTGTGGCAAAAATTAATAGGGCATAAAAATT
TAATAAATTCCCAATTCTTCCCCCCGGCAAGCCCAATTTCCCTCCCAACC
CCCTTGTTATCAAAACTTCTTGCCGTATG
back to top