DY271439

Overview
NameDY271439
Unique NameDY271439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig522 contig Ccv1_Contig522:248..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAAC (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain COL) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.165e-53
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 606
            GF PLL G   VDFGDI   E++ +      A  + EPIQGE GV IPP GY++AVR LC K+ IL+IADEIQ GL R+G+  A +WE+V PD+ ILGKALGGG+ PVSAVLA+ +VM  + PG HGSTFGGNPLA A++ A+LDV++DE+L ERS  LG  L + L  +Q + P+ +KE+RGRGLF  +E +  A P
Sbjct:  157 GFHPLLQGTTTVDFGDI---EQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKAL--LQLKHPS-IKEIRGRGLFIGIELNTDAAP 348          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT1_STAAR (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain MRSA252) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.828e-53
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 606
            GF PLL G   VDFGDI   E++ +      A  + EPIQGE GV IPP GY++AVR LC K+ IL+IADEIQ GL R+G+  A +WE+V PD+ ILGKALGGG+ PVSAVLA+ +VM  + PG HGSTFGGNPLA A++ A+LDV++DE+L ERS  LG  L + L  +Q + P+ +KE+RGRGLF  +E +  A P
Sbjct:  157 GFHPLLQGTKTVDFGDI---EQLTQAISPNTAAIILEPIQGEGGVNIPPKGYIQAVRQLCDKHQILLIADEIQVGLGRTGKWFAMEWEQVVPDIYILGKALGGGLYPVSAVLANNDVMRVLTPGTHGSTFGGNPLAIAISTAALDVLKDEQLVERSERLGSFLLKAL--LQLKHPS-IKEIRGRGLFIGIELNTDAAP 348          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_PLAYO (Ornithine aminotransferase OS=Plasmodium yoelii yoelii GN=OAT PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.833e-52
Identity = 102/213 (47.89%), Postives = 149/213 (69.95%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            FGP  P   KV + D+ ALE+  K+    +  F+ EPIQGEAGVI+P D YL+ V D+C KYN+L +ADE+Q+GL R+G++L      V+PD+++LGKAL GG  P+SAVLA+ ++ML I+PGEHGST+GGNPLA+++ + +L+V+ +EKL E +  LG    ++L K + +    V++VRG+GL  A+EF      V+  DICLK+KE G++
Sbjct:  167 FGPFAPQFSKVPYDDLEALEEELKDPN--VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENL-KRELKDSKIVRDVRGKGLLCAIEFKNEL--VNVLDICLKLKENGLI 374          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_PLACH (Ornithine aminotransferase OS=Plasmodium chabaudi GN=OAT PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.126e-52
Identity = 103/213 (48.36%), Postives = 147/213 (69.01%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            FGP  P   KV + D+ ALE+  K+    + GF+ EP+QGEAGVI+P D YL  V +LC KYN+L +ADE+Q+GL R+G++L      V+PD+V+LGKAL GG  P+SAVLA+  VML I+PGEHGST+GGNPLA+++ + SL+V+ +EKL E +  LG    + L K + +    ++++RG+GL  A+EF      V+  DICLK+KE G++
Sbjct:  167 FGPFAPQFSKVPYNDLEALEEELKDPN--VCGFIVEPVQGEAGVIVPSDNYLPGVYNLCKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVVLLGKALSGGHYPISAVLANDSVMLVIKPGEHGSTYGGNPLAASICVESLNVLINEKLCENADKLGGPFLEGL-KKELKDSKIIRDIRGKGLLCAIEFKNEL--VNVLDICLKLKENGLI 374          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_YEAST (Ornithine aminotransferase OS=Saccharomyces cerevisiae GN=CAR2 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 5.796e-52
Identity = 109/227 (48.02%), Postives = 146/227 (64.32%), Query Frame = 1
Query:   16 FGPLLP----GHL--KVDFGDITALEKIFKE-SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW--EEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT-ALPVSAYDICLKMKERGILA*PT 666
            FGP +P    GH   K+ +G       I +   G  +A  + EPIQGEAG+++PP  Y   V  LC K+N+L+I DEIQ+G+ R+G +L  D    E +PD+V+LGKAL GGV+PVS VL+  ++M C  PG HGSTFGGNPLAS VAIA+L+VIRDEKL +R+A LG      L  +Q +    + EVRG GL  A+  D + A   +A+D+CL MK+ G+LA PT
Sbjct:  166 FGPFVPNVASGHSVHKIRYGHAEDFVPILESPEGKNVAAIILEPIQGEAGIVVPPADYFPKVSALCRKHNVLLIVDEIQTGIGRTGELLCYDHYKAEAKPDIVLLGKALSGGVLPVSCVLSSHDIMSCFTPGSHGSTFGGNPLASRVAIAALEVIRDEKLCQRAAQLGSSFIAQLKALQAKSNGIISEVRGMGLLTAIVIDPSKANGKTAWDLCLLMKDHGLLAKPT 392          

HSP 2 Score: 22.7126 bits (47), Expect = 5.796e-52
Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 3
Query:  684 RLTPPLSINSIDLQKG 731
            RL PPL I+  DLQ G
Sbjct:  398 RLAPPLVISEEDLQTG 413          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BRAJA (Ornithine aminotransferase OS=Bradyrhizobium japonicum GN=rocD PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.746e-47
Identity = 112/248 (45.16%), Postives = 151/248 (60.89%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA*PTP*YNSPG*LPPSP*IQLTSRRVKGAA*SFGT 759
            FGP  PG   + FGD  ALE+    +      FL EPIQGEAGVIIPP GY   VR+LC+  N++++ DEIQ+GL R+G++LA   E +  D+ +LGKAL GG  PVSAVL++ EV+  ++PG+HGSTFGGNPLA AVA A++ V+ +E + E +A  G  L + L  I+    N V+EVRGRGL  AVE    A     Y  C  ++ +GILA  T  +     +  +P + +TS  V  A   F T
Sbjct:  162 FGPFAPGFRIIPFGDAAALEQAITPN---TVAFLVEPIQGEAGVIIPPAGYFTKVRELCTANNVMLVLDEIQTGLGRTGKLLAEQHEGIEADVTLLGKALAGGFYPVSAVLSNNEVLGTLRPGQHGSTFGGNPLACAVARAAMRVLVEEGMIENAARQGARLLEGLKDIR---ANTVREVRGRGLMLAVELHPEAGRARRY--CEALQGKGILAKDTHGHT----IRIAPPLVITSDEVDWALEQFAT 397          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BORPE (Ornithine aminotransferase OS=Bordetella pertussis GN=rocD PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.746e-47
Identity = 104/218 (47.71%), Postives = 137/218 (62.84%), Query Frame = 1
Query:    1 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            +A  G+GP  PG   V FGD  AL+        +   FL EPIQGEAGVI+PP GY + VR LCS+ +I++I DEIQ+GL R+G  LA   E +  D+ ++GKAL GG  PVSAVL+++ V+   QPG+HGSTFGGNPLA AVA A+L V+ DE + + +   G    Q L    +  P  V+EVRGRGL  A+E +  A P  AY  C ++  RG+L
Sbjct:  158 DARGGYGPFAPGFTVVPFGDFAALQAAVTP---RTVAFLVEPIQGEAGVILPPPGYFRQVRKLCSERDIVLILDEIQTGLGRTGAFLAEAHEGIEADVTLIGKALSGGFYPVSAVLSNQAVLGIFQPGQHGSTFGGNPLACAVARAALRVLHDEGMIDNAREQGAYFMQRL----RALPGPVREVRGRGLMLALELEPDAGPARAY--CERLMARGML 366          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BORPA (Ornithine aminotransferase OS=Bordetella parapertussis GN=rocD PE=3 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 6.746e-47
Identity = 104/218 (47.71%), Postives = 137/218 (62.84%), Query Frame = 1
Query:    1 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            +A  G+GP  PG   V FGD  AL+        +   FL EPIQGEAGVI+PP GY + VR LCS+ +I++I DEIQ+GL R+G  LA   E +  D+ ++GKAL GG  PVSAVL+++ V+   QPG+HGSTFGGNPLA AVA A+L V+ DE + + +   G    Q L    +  P  V+EVRGRGL  A+E +  A P  AY  C ++  RG+L
Sbjct:  158 DARGGYGPFAPGFTVVPFGDFAALQAAVTP---RTVAFLVEPIQGEAGVILPPPGYFRQVRKLCSERDIVLILDEIQTGLGRTGAFLAEAHEGIEADVTLIGKALSGGFYPVSAVLSNQAVLGIFQPGQHGSTFGGNPLACAVARAALRVLHDEGMIDNAREQGAYFMQRL----RALPGPVREVRGRGLMLALELEPDAGPARAY--CERLMARGML 366          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_BORBR (Ornithine aminotransferase OS=Bordetella bronchiseptica GN=rocD PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.746e-47
Identity = 104/218 (47.71%), Postives = 137/218 (62.84%), Query Frame = 1
Query:    1 EAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            +A  G+GP  PG   V FGD  AL+        +   FL EPIQGEAGVI+PP GY + VR LCS+ +I++I DEIQ+GL R+G  LA   E +  D+ ++GKAL GG  PVSAVL+++ V+   QPG+HGSTFGGNPLA AVA A+L V+ DE + + +   G    Q L    +  P  V+EVRGRGL  A+E +  A P  AY  C ++  RG+L
Sbjct:  158 DARGGYGPFAPGFTVVPFGDFAALQAAVTP---RTVAFLVEPIQGEAGVILPPPGYFRQVRKLCSERDIVLILDEIQTGLGRTGAFLAEAHEGIEADVTLIGKALSGGFYPVSAVLSNQAVLGIFQPGQHGSTFGGNPLACAVARAALRVLHDEGMIDNAREQGAYFMQRL----RALPGPVREVRGRGLMLALELEPDAGPARAY--CERLMARGML 366          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_KLEP3 (Putrescine aminotransferase OS=Klebsiella pneumoniae (strain 342) GN=patA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.458e-46
Identity = 96/218 (44.04%), Postives = 141/218 (64.68%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            F PLLPG   V FGDI A+  +    K++GD +A  + EPIQGE GVI+PP GYL AVR LC ++  L+I DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV  +L   P  H +TFGGNPLA A A+A+++V+  + L  ++A  G+ L      + Q++P+ V EVRG+G+  A+EF    +    YD   +M  + +L
Sbjct:  200 FMPLLPGFRHVPFGDINAMRTMLSECKKTGDDVAAVILEPIQGEGGVILPPQGYLPAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLTQNLPAQAAQKGDMLLDGFRLLAQEYPDLVNEVRGKGMLMAIEFVDNEI---GYDFASEMFRQRVL 414          
The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OAT1_STAAC2.165e-5355.56Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]
OAT1_STAAR2.828e-5355.56Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]
OAT_PLAYO1.833e-5247.89Ornithine aminotransferase OS=Plasmodium yoelii yo... [more]
OAT_PLACH3.126e-5248.36Ornithine aminotransferase OS=Plasmodium chabaudi ... [more]
OAT_YEAST5.796e-5248.02Ornithine aminotransferase OS=Saccharomyces cerevi... [more]
OAT_BRAJA6.746e-4745.16Ornithine aminotransferase OS=Bradyrhizobium japon... [more]
OAT_BORPE6.746e-4747.71Ornithine aminotransferase OS=Bordetella pertussis... [more]
OAT_BORPA6.746e-4747.71Ornithine aminotransferase OS=Bordetella parapertu... [more]
OAT_BORBR6.746e-4747.71Ornithine aminotransferase OS=Bordetella bronchise... [more]
PAT_KLEP37.458e-4644.04Putrescine aminotransferase OS=Klebsiella pneumoni... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bp
GAGGCCATTCGTGGTTTTGGACCATTGTTACCTGGCCATCTTAAGGTTGA
TTTTGGTGATATAACTGCTCTAGAGAAAATCTTTAAAGAAAGTGGAGATC
AAATAGCTGGATTTCTTTTTGAACCAATTCAAGGAGAGGCTGGGGTTATA
ATTCCTCCAGATGGTTACTTGAAAGCTGTTAGAGATCTTTGCTCAAAGTA
TAACATCTTAATGATTGCTGATGAGATACAGAGTGGTTTAGCACGATCTG
GAAGAATGTTGGCCTCTGATTGGGAAGAAGTTCGCCCTGATATGGTGATA
CTAGGAAAGGCATTGGGTGGTGGAGTCATACCTGTCAGTGCAGTGCTTGC
AGACAAAGAAGTGATGCTTTGCATTCAACCTGGAGAGCATGGAAGCACCT
TCGGCGGAAATCCTTTGGCCAGTGCGGTGGCTATTGCCTCGCTGGATGTG
ATCAGAGATGAGAAACTTGCAGAGAGATCAGCGCATTTGGGAGAAGAGCT
CAGACAGCATCTTTTTAAAATTCAGCAGCAATTTCCAAACTACGTTAAAG
AGGTTCGAGGAAGAGGTTTGTTCAATGCCGTGGAGTTTGACAAGACGGCA
TTGCCTGTTTCTGCATATGACATCTGTCTAAAGATGAAGGAAAGGGGCAT
CCTTGCCTAACCCACTCCATGATACAATAGTCCCGGTTAACTCCCCCCCT
CTCCATAAATTCAATTGACCTCCAGAAGGGTCAAAGGCGCTGCATGAAGT
TTTGGAACTTGACCTGCCCAAAAAGCCGAAACCCCAACCCAGCAAAGCCC
CTGCCACCCCATGTTCCCGTTGTGGCAAAAATTAATAGGGCATAAAAATT
TAATAAATTCCCAATTCTTCCCCCCGGCAAGCCCAATTTCCCTCCCAACC
CCCTTGTTATCAAAACTTCTTGCCGTATG
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