DY271439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALNS (Putrescine aminotransferase OS=Salmonella newport (strain SL254) GN=patA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.834e-45 Identity = 91/198 (45.96%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 R F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++PN V + RG+G+ A+EF Sbjct: 198 RPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALCH (Putrescine aminotransferase OS=Salmonella choleraesuis GN=patA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.834e-45 Identity = 91/198 (45.96%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 R F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++PN V + RG+G+ A+EF Sbjct: 198 RPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALA4 (Putrescine aminotransferase OS=Salmonella agona (strain SL483) GN=patA PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.834e-45 Identity = 91/198 (45.96%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 R F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++PN V + RG+G+ A+EF Sbjct: 198 RPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALG2 (Putrescine aminotransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=patA PE=3 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 3.702e-45 Identity = 91/198 (45.96%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 R F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++PN V + RG+G+ A+EF Sbjct: 198 RPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALEP (Putrescine aminotransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=patA PE=3 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 3.702e-45 Identity = 91/198 (45.96%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 R F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++PN V + RG+G+ A+EF Sbjct: 198 RPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALDC (Putrescine aminotransferase OS=Salmonella dublin (strain CT_02021853) GN=patA PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.702e-45 Identity = 91/198 (45.96%), Postives = 134/198 (67.68%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 R F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++PN V + RG+G+ A+EF Sbjct: 198 RPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLIAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SALAR (Putrescine aminotransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=patA PE=3 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.837e-44 Identity = 89/196 (45.41%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG+I A+ F K++GD+IA + EPIQGE GVI+PP GYL VR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V + RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVTFGNINAMRMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPDLVHDARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_CITK8 (Putrescine aminotransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=patA PE=3 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.837e-44 Identity = 89/196 (45.41%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG+I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+PV A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V++ RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPQGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPVGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFLQLAREYPDLVQDARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SHIFL (Putrescine aminotransferase OS=Shigella flexneri GN=patA PE=3 SV=5) HSP 1 Score: 179.104 bits (453), Expect = 3.134e-44 Identity = 89/196 (45.41%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG+I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V+E RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SHIF8 (Putrescine aminotransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=patA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.134e-44 Identity = 89/196 (45.41%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG+I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V+E RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 395 The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bpback to top |