DY271439
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_ESCF3 (Putrescine aminotransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=patA PE=3 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 5.345e-44 Identity = 89/196 (45.41%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V+E RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGHIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_ECOL6 (Putrescine aminotransferase OS=Escherichia coli O6 GN=patA PE=3 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 89/196 (45.41%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG+I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V+E RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGNIEAMLTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_ECO7I (Putrescine aminotransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=patA PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 9.117e-44 Identity = 88/196 (44.90%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FG+I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPL A A+A+++V+ ++ L ++ G+ L ++ +++P+ V+E RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLTCAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_ENT38 (Putrescine aminotransferase OS=Enterobacter sp. (strain 638) GN=patA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.191e-43 Identity = 87/196 (44.39%), Postives = 134/196 (68.37%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F PLLPG V FGDI A+ + E +GD +A + EPIQGE GVI+PP GYL AVR LC +++ L+I DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPL+ A A+A+++V+ ++ L ++ G+ L ++ +++P+ V++ RG+G+ A+EF Sbjct: 200 FMPLLPGFRHVPFGDINAMRTMLTECRKTGDDVAAVILEPIQGEGGVILPPLGYLPAVRKLCDEFDALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFDNPFLHTTTFGGNPLSCAAALATINVLLEQNLPAQAEQKGDMLLDGFLQLGREYPDLVQDARGKGMLIAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_ERWCT (Putrescine aminotransferase OS=Erwinia carotovora subsp. atroseptica GN=patA PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.653e-43 Identity = 96/220 (43.64%), Postives = 140/220 (63.64%), Query Frame = 1 Query: 10 RGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654 R F PLLPG V FGDI+A+ K ++ +GD +A + EPIQGE GVI+PP+ YL AVR LC + L+I DE+Q+G+ R+G+M A + V+PD++ L KALGGGV+P+ A +A + V +L P H +TFGGNPLA A A+A+++ + + L E++A GE L Q L ++ ++P + E RG GL A+EF K + Y ++ +R IL Sbjct: 198 RPFMPLLPGFHHVAFGDISAMRKQVQQCQKTGDDVAAIILEPIQGEGGVIVPPENYLPAVRALCDEVGALLILDEVQTGMGRTGKMFACEHYGVQPDILCLAKALGGGVMPIGATVATEAVFSVLFENPFLHTTTFGGNPLACAAALATVNELLTKNLPEQAAIQGEFLLQGLQQLAAEYPQLIIEARGMGLLQAIEFRKNEI---GYAFAKELFQRNIL 414
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: PAT_SHISS (Putrescine aminotransferase OS=Shigella sonnei (strain Ss046) GN=patA PE=3 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.465e-43 Identity = 88/196 (44.90%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIF---KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 588 F LLPG V FG+I A+ K++GD +A + EPIQGE GVI+PP GYL AVR LC ++ LMI DE+Q+G+ R+G+M A + E V+PD++ L KALGGGV+P+ A +A +EV +L P H +TFGGNPLA A A+A+++V+ ++ L ++ G+ L ++ +++P+ V+E RG+G+ A+EF Sbjct: 200 FMQLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQADQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF 395
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_METKA (Acetylornithine aminotransferase OS=Methanopyrus kandleri GN=argD PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 7.224e-41 Identity = 92/213 (43.19%), Postives = 131/213 (61.50%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654 F PL+P V +GD+ A+EK D A + EP+QGEAGV IPP+G+L+ +R+LC ++ +L+I DE+QSG+ R+G+ A + E+V PD+V L K LGGGV PV A +A +EV +PG+HGSTFGGNPLA A A++ + +E L E + G + +I + + V+EVRGRGL VE A D+ +M +RG L Sbjct: 151 FEPLVPEFEHVPYGDVNAVEKAID---DDTAAVIVEPVQGEAGVRIPPEGFLRELRELCDEHGLLLIVDEVQSGMGRTGQFFAFEHEDVLPDIVCLAKGLGGGV-PVGATIAREEVAEAFEPGDHGSTFGGNPLACAAVCAAVSTVLEENLPEAAERKG----KLAMRILSEAEDVVEEVRGRGLMMGVEVGDDE---RAKDVAREMLDRGAL 352
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_METTH (Acetylornithine aminotransferase OS=Methanobacterium thermoautotrophicum GN=argD PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.779e-39 Identity = 86/192 (44.79%), Postives = 123/192 (64.06%), Query Frame = 1 Query: 16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 591 F PL G V +GDI A+ GD+ A + EP+QGE GVIIPP+GYLK V++L + ++L+I DE+Q+G R+G M AS V PD+ + KA+GGG P+ AVLA++ V + +PG+HGSTFGGNP A AIA+++V+ DEKL ER+A +G L ++ + V+++RG GL +E D Sbjct: 152 FRPLPEGFKHVPYGDIGAMADAV---GDETAAIILEPVQGEGGVIIPPEGYLKDVQELARQNDVLLILDEVQTGFGRTGAMFASQLFGVEPDITTVAKAMGGG-YPIGAVLANERVAMAFEPGDHGSTFGGNPWGCAAAIATIEVLMDEKLPERAAKMGSYFLGRLRQVLHGC-DAVRDIRGVGLMIGIEID 338
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: ARGD_METJA (Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.761e-39 Identity = 94/218 (43.12%), Postives = 131/218 (60.09%), Query Frame = 1 Query: 13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV----IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654 GF PL PG V F DI AL++ D+ A + EP+QGE G+ + YLKAVRDLC NI++I DE+Q G+ R+GRM A + V PD++ L KALGGGV P+ AV+ +E+ + G+HG+TFGGNPLA + A+AS++V I+D+K+ E+ + +L + K N++KEVRG GL E L + DI KM E+G L Sbjct: 157 GFYPLPPGFKYVPFNDIEALKEAIT---DKTAAIMIEPVQGEGGIHVADKDYLKAVRDLCDDKNIVLIFDEVQCGMGRTGRMFAFEHYGVEPDILTLAKALGGGV-PIGAVVLKEEIAKALSYGDHGTTFGGNPLACSAALASVEVIEELIKDDKVIEKGKYFIRKLENLIEKY-----NFIKEVRGLGLMIGAE-----LEFNGADIVKKMLEKGFL 360
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_VIGAC (Ornithine aminotransferase OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.153e-38 Identity = 91/205 (44.39%), Postives = 127/205 (61.95%), Query Frame = 1 Query: 22 PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM 636 P +PG V + D ALEK F++ + ++ EPIQGEAGV+ GYL VR+LC+KYN+L IADE+Q+GLAR+GRMLA D E+V+PD++ILGKAL GG+ PVSAVL D +M CIQPG H + +P +A + V + E + LR+ L + + + V VRG+GL NA+ +K A+D+CL + Sbjct: 198 PYMPGFEIVKYNDTAALEKAFQDPN--VCAYMVEPIQGEAGVVALDAGYLTEVRELCTKYNVLFIADEVQTGLARTGRMLAVDHEDVKPDLLILGKALSGGLYPVSAVLRDDHIMDCIQPGLHTAMDVMDPRMRILAASRYYVRVARERCENAQIQATYLRKELNTLPK---DVVPVVRGKGLLNAIVINK---KFDAWDVCLNL 394 The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bpback to top |