DY271440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOB_MOUSE (Rho-related GTP-binding protein RhoB OS=Mus musculus GN=Rhob PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44 Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+KT++ V+ VF+ A + ALQ Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOB_HUMAN (Rho-related GTP-binding protein RhoB OS=Homo sapiens GN=RHOB PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44 Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+KT++ V+ VF+ A + ALQ Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOB_BOVIN (Rho-related GTP-binding protein RhoB OS=Bos taurus GN=RHOB PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44 Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+KT++ V+ VF+ A + ALQ Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHO1_ASHGO (GTP-binding protein RHO1 OS=Ashbya gossypii GN=RHO1 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44 Identity = 93/173 (53.76%), Postives = 118/173 (68.21%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 K V VGDGA GKTCLLI + FP YVPTVFDN+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ +S+ S ENV +KWI E+ ++ GVPIILVG K DLR+D Q + G P+S AQ +E+ IGA YIECS+KT V+ VF+AA + +L Sbjct: 13 KLVIVGDGACGKTCLLIVFAKGKFPQVYVPTVFDNYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICYSIDLPDSLENVMEKWISEVLYFCQGVPIILVGCKADLRNDPQVIEQLRQQGQQPVSQAQAQEVADQIGAVEYIECSAKTGFGVREVFEAATRASL 185
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOV_RAT (Rho-related GTP-binding protein RhoV OS=Rattus norvegicus GN=Rhov PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.046e-44 Identity = 88/178 (49.44%), Postives = 123/178 (69.10%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 IKCV VGDGAVGK+ L++SYT N +P+ Y PT D FS V+V+G+ V + LWDTAGQED++RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP AQG L + I A Y+ECS+ TQ+N+K VFD+AI A++ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPSRYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPEPQAQG--LAEKIRACCYLECSALTQKNLKEVFDSAILSAIE 207
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 4.046e-44 Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFAL 724 K V VGDGA GKTCLLI ++ FP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY ++V ++ FS+ S ENV +KWI E+ H+ GVPIILVG K+DLR+D Q + G P+++ +G+ + IGA Y ECS+KT V+ VF+AA + +L Sbjct: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHO_APLCA (Ras-like GTP-binding protein RHO OS=Aplysia californica GN=RHO PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44 Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 2 Query: 212 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VPIILVG K DLR+D+ + + P+ G + + I A +Y+ECS+KT++ V+ VF+ A + ALQ Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKKDLRNDESTKRELMKMKQEPVRPEDGRAMAEKINAYSYLECSAKTKEGVRDVFETATRAALQ 180
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOV_MOUSE (Rho-related GTP-binding protein RhoV OS=Mus musculus GN=Rhov PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44 Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED++RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP AQG L + I A Y+ECS+ TQ+N+K VFD+AI A++ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSALTQKNLKEVFDSAILSAIE 207
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RHOV_HUMAN (Rho-related GTP-binding protein RhoV OS=Homo sapiens GN=RHOV PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44 Identity = 88/178 (49.44%), Postives = 122/178 (68.54%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFALQ 727 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED++RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP AQG L + I A Y+ECS+ TQ+N+K VFD+AI A++ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSALTQKNLKEVFDSAILSAIE 207
BLAST of DY271440 vs. ExPASy Swiss-Prot
Match: RACD_DICDI (Rho-related protein racD OS=Dictyostelium discoideum GN=racD PE=2 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44 Identity = 91/173 (52.60%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 209 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKFA 721 +K V VGDGAVGKT LLI YT+ FP DYVPTVFDNF+ + + VNL LWDTAGQEDY+ LRPLSY DVFI+ +S++ + S +N+ KW+PE+ G PIILVGTK DLR+DK+ + P+S +G L K IGA + ECS+ T V +F AAIK A Sbjct: 9 VKVVVVGDGAVGKTSLLILYTTKAFPKDYVPTVFDNFNCLEMYDNKPVNLVLWDTAGQEDYDNLRPLSYPQTDVFIICYSVVKRDSLDNIKYKWLPEINQTNQGTPIILVGTKTDLREDKKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSALTGNGVNDIFAAAIKAA 181 The following BLAST results are available for this feature:
BLAST of DY271440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271440 ID=DY271440; Name=DY271440; organism=Citrus clementina; type=EST; length=918bpback to top |