DY304941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.650e-34 Identity = 78/182 (42.86%), Postives = 116/182 (63.74%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEIYRIISKKSLSSWE 673 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+TIK QIW+TA QE++ IT++YYRGA G +++YDVT ++ NV +WL+E+ +A + +++GNK+DL + V A +A+ G+ F+ETSA A NVE AF T+ +EI + + + S E Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 2.650e-34 Identity = 76/172 (44.19%), Postives = 111/172 (64.53%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEIYRI 643 + EYD LF+++LIGDSGVGKS LL RF + S IG F T ++G+ IK QIW+TA QE++ IT++YYRGA G +++YDVT +F NV +W++E++ +A + +++GNK DL + V T A YA+ G+ F+ETSA + NVE AF + SEI ++ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKL 172
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.460e-34 Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 140 YD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEIYRII 646 Y LF+ ++IGD+GVGKS LL +FT +F IG F ++ + IK QIW+TA QE + +IT +YYRGA GALL+YD+T+ TF +++ WL++ R HA++ + IM++GNK DL H RAV+ ++ +A+ GL F+E SA A NVE AF IY+ I Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKI 171
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.460e-34 Identity = 77/169 (45.56%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEI 634 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+TIK QIW+TA QE++ IT++YYRGA G +++YDVT +F NV +WL+E+ +A + +++GNK DL + V A +A+ G+ F+ETSA A NVE AF T+ +EI Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 3.460e-34 Identity = 77/182 (42.31%), Postives = 116/182 (63.74%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEIYRIISKKSLSSWE 673 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+TIK QIW+TA QE++ +T++YYRGA G +++YDVT ++ NV +WL+E+ +A + +++GNK+DL + V A +A+ G+ F+ETSA A NVE AF T+ +EI + + + S E Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.520e-34 Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEI 634 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+ IK QIW+TA QE++ IT++YYRGA G +++YDVT +F NV +WL E+ +A + +++GNK+DL + V A ++A+ G+ F+ETSA A NVE AF T+ +EI Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.520e-34 Identity = 75/176 (42.61%), Postives = 112/176 (63.64%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEIYRIISKK 655 + + YD LF+++LIGDSGVGK+ LL RF+ F S IG F T +++G+ IK QIW+TA QE++ IT AYYRGA G + +YD+T +F+N+ W++ + +HA S + M++GNK D+ R V+ + A G+ F+ETSA +INVE AF T+ +I ++KK Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKK 176
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 7.709e-34 Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEI 634 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+TIK QIW+TA QE++ IT++YYRGA G +++YDVT +F NV +WL+E+ +A + +++GNK DL + V A +A+ G+ F+ETSA A NVE +F T+ +EI Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 7.709e-34 Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEI 634 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+TIK QIW+TA QE++ IT++YYRGA G +++YDVT +F NV +WL+E+ +A + +++GNK DL + V A +A+ G+ F+ETSA A NVE +F T+ +EI Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of DY304941 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 7.709e-34 Identity = 76/169 (44.97%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 128 LEEEYD*LFEVVLIGDSGVGKSNLLSRFTRIKFCLESKSLIGC*FSTLTRQVEGRTIKAQIWNTA*QEQY*AITNAYYRGARGALLLYDVTKPTTFENVSRWLKELRDHADSYIVIMMIGNKTDLKHLRAVATQDALSYAEREGLSFVETSALEAINVENAFQTILSEI 634 + EYD LF+++LIGDSGVGKS LL RF + S IG F T +++G+TIK QIW+TA QE++ IT++YYRGA G +++YDVT +F NV +WL+E+ +A + +++GNK DL + V A +A+ G+ F+ETSA A NVE +F T+ +EI Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 The following BLAST results are available for this feature:
BLAST of DY304941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304941 ID=DY304941; Name=DY304941; organism=Citrus clementina; type=EST; length=1260bpback to top |