DY304955

Overview
NameDY304955
Unique NameDY304955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1120
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.665e-53
Identity = 103/164 (62.80%), Postives = 117/164 (71.34%), Query Frame = 1
Query:  346 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTT 837
            + S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS F DENF  KH GPG+LSMANAGP TNGSQFF+CT KT+WLDGKHVVFG V EGMDVV+ IE  GS  G+T+
Sbjct:   40 SSSSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTS 196          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.665e-53
Identity = 105/151 (69.54%), Postives = 117/151 (77.48%), Query Frame = 1
Query:  376 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFG 828
            FFDMT+GGQPAGRI+MELF DV P+TAENFRALCTGEKGIG SGK + Y+GS FHRVIP FM Q            ESIYG+ FADENF+ KHT PG+LSMANAGPGTNGSQFF+ T  T  LDGKHVVFG+VVEGMDVV+ IE   +  G
Sbjct:    5 FFDMTIGGQPAGRIIMELFPDV-PKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRG 154          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.174e-53
Identity = 100/155 (64.52%), Postives = 117/155 (75.48%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRT 834
            KVFFD+T+G   AGRIVMELF +VTP+TAENFRALCTGEKG+GK+GKPLH+KGS FHRVI  FM Q            ESIYG  FADENF  KH  PG+LSMANAGP TNGSQFF+      WLDGKHVVFG+VVEG+++++ +E  GS  G+T
Sbjct:    4 KVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQT 158          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.840e-53
Identity = 98/158 (62.03%), Postives = 115/158 (72.78%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTS 840
            PKVFFD+ V G+P+GR+  +LF+D  P+TAENFRALCTGEKG G SGKPLHYKGS FHR+IPGFM Q            ESIYG  F DENF  KHTG G+LSMANAGP TNGSQFF+   KT WLDG H VFGQ+VEG  V++ +E+ G+  G  T+
Sbjct:    7 PKVFFDVAVNGKPSGRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQLVEGNQVLEILEQHGTQSGMPTA 164          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 3.709e-53
Identity = 99/157 (63.06%), Postives = 114/157 (72.61%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTS 840
            KV+FD+ + G+ AGR+V+ LF    P+TAENFRALCTGEKG+GKSGKPLHYKGS FHR+IP FM Q            ESIYG  FADENF  KHTGPG+LSMAN+G  TNGSQFF+ T  T WLDG+HVVFG+VV+GMDVV  IE  G   G   S
Sbjct:   33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKS 189          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 4.301e-53
Identity = 100/160 (62.50%), Postives = 115/160 (71.88%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTT 837
            M  P+VFFD+   G+  GRIVMEL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIPGFMCQ            +SIYG  FADENF  KHT PGILSMANAG  TNGSQFF+CTA T WLDGKHVVFG V +G+D+++ +E  GS  G+T+
Sbjct:    1 MAKPQVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSGKTS 153          

HSP 2 Score: 21.557 bits (44), Expect = 4.301e-53
Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  828 KDHKPVVIAECGQL 869
            K  K + IA+CGQL
Sbjct:  151 KTSKKITIADCGQL 164          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.841e-52
Identity = 105/163 (64.42%), Postives = 117/163 (71.78%), Query Frame = 1
Query:  352 SKMPN-PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTT 837
            SKM   P+VFFDMT   +P GRIVMEL +DV P+TAENFRALCTGEKG G       YKGS FHRVIP FMCQ            +SIYG+ F DENF  KHTG GILSMANAG  TNGSQFF+CT KT WLD KHVVFG+VVEG+DVV+ IE  GS  G+T+
Sbjct:   61 SKMSTLPRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTS 216          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 3.140e-52
Identity = 100/157 (63.69%), Postives = 112/157 (71.34%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTS 840
            KV+FD+ + G+ AGRIVM LF    P+T ENFRALCTGEKGIGK+GK LHYKGSSFHR+IP FM Q            ESIYG  FADENF  KHTGPG LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+VV GMDVV  +E  G+  G   S
Sbjct:   36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKS 192          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 3.471e-51
Identity = 103/157 (65.61%), Postives = 112/157 (71.34%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFG 828
            M NPKVFFD++   +P GRIVMEL ADV P+TAENFRALCTGEKG G       YKG SFHRVIP FM Q            +SIYG+ F DENF  KHTGPG LSMANAGP TNGSQFF+ T K  WLDGKHVVFG+V EGMDVVQ IE +GS  G
Sbjct:    1 MSNPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNG 150          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 3.854e-51
Identity = 99/167 (59.28%), Postives = 117/167 (70.06%), Query Frame = 1
Query:  337 SPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTT 837
            S  +  K    +VFFD+T+GG+ AGRIV EL+ D+ P+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVI  FM Q            ESIYG+ F DENF  KH  P +LSMANAGPGTNGSQFFV T  T  LDGKHVVFG+V+ G  VV+ IE + +   + T
Sbjct:    2 SSTDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPT 168          

HSP 2 Score: 21.9422 bits (45), Expect = 3.854e-51
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  828 KDHKPVVIAECGQLS 872
            K  K  VIA+CG+LS
Sbjct:  166 KPTKDAVIADCGELS 180          
The following BLAST results are available for this feature:
BLAST of DY304955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIF_BOVIN1.665e-5362.80Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CYPX_USEUD1.665e-5369.54Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
PPI2_SYNY32.174e-5364.52Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CYP5_RHIOR2.840e-5362.03Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
CP19D_ARATH3.709e-5363.06Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
PPIA_HEMPU4.301e-5362.50Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIA_DROME1.841e-5264.42Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
CP20A_ARATH3.140e-5263.69Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
PPIA1_RHIOR3.471e-5165.61Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPID_NEUCR3.854e-5159.2841 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BH05RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304955 ID=DY304955; Name=DY304955; organism=Citrus clementina; type=EST; length=1120bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGG
AAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCCAGGC
CATCGAGAAAGTGGGGTCCAGCTTCGGAAGGACCACAAGCCCGTCGTGAT
CGCTGAATGCGGTCAATTGTCTTAAATTTGATCATGATAATGGATCGCAT
CACCCGAACCGTCCGATCGCGATCGTGATGGTGATTATGTTATCTATATT
AAAGTGGCCGTGGCCTGAGGACTTTTAATCTTTACCTAATTTTCCCGGCT
TGTACTTGGTCGGGGTGGGAACGGGCCCCCGGGGGGTGGTTCTGAAGGAA
AGGGTTTTTTTTGTCTTTCCTAAGAAACCTCCCTTTTTAAAAAAAAAAGG
GGCCTTTTCTTTGTTATATT
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