DY304955

Overview
NameDY304955
Unique NameDY304955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1120
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 4.534e-51
Identity = 93/153 (60.78%), Postives = 110/153 (71.90%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFG 828
            KVFFD+ +  +PAGRIV  L+    P+T ENFRALCTGEKG+G SGKPLHYK S FHR+IP FM Q            ESIYG  F DENF  KH+ PG+LSMANAGP TNGSQFF+ T  T WLDG+H VFG+V+EGMD+V+ +E +GS  G
Sbjct:   31 KVFFDIEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSG 183          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.939e-50
Identity = 96/152 (63.16%), Postives = 113/152 (74.34%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKV 813
            M NP+V+FD+T+G +P GRIV ELF D+ P+TAENFRALCTGEKG GKSGKPL Y+GS FHR+I  FM Q            ESIYG  F DENFV KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKHVVFG+V++G  VV+A+E +
Sbjct:    1 MSNPRVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENL 152          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.838e-50
Identity = 97/168 (57.74%), Postives = 114/168 (67.86%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTSPS*SLNAVNC 870
            PKVFFD+ V GQ +GR+  +LF+D  P+TAENFRALCTGEKG G SGKPLHYK S FHR+IPGFM Q            ESIYG  F DENF  KH G G+LSMANAGP TNGSQFF+    T WLDG H VFGQ+V+G  V+  +E+ GS   R+  PS  +   +C
Sbjct:    7 PKVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGS---RSGMPSAKIEITDC 171          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.676e-49
Identity = 90/147 (61.22%), Postives = 108/147 (73.47%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIE 807
            P VFFD+ +GGQ AGR+   L++D+ P+TAENFRALCTGEKG+G+SGKPL YKGS+FHRVI GFMCQ            ESIYG  F DE F   H+ P +LSMANAGP TNGSQFF+  + T  LDGKHVVFG+V++G  VV+ IE
Sbjct:    5 PIVFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIE 151          

HSP 2 Score: 25.409 bits (54), Expect = 2.676e-49
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 3
Query:  837 KPVVIAECGQLS 872
            +PVVIA+CGQLS
Sbjct:  163 EPVVIADCGQLS 174          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.710e-48
Identity = 94/158 (59.49%), Postives = 110/158 (69.62%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTS 840
            P+VFFD+ +G Q  GRI  ELF DV P+TAENFRALCTGEKG+GK GKPLH+KGS FHRVI  FM Q            ESIYG  F DENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + +   + T+
Sbjct:    7 PRVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTT 164          

HSP 2 Score: 20.4014 bits (41), Expect = 1.710e-48
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 3
Query:  819 QLRKDHKPVVIAECGQLS 872
            Q  K    V IAECG+L+
Sbjct:  158 QADKPTTDVTIAECGELT 175          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.106e-48
Identity = 99/179 (55.31%), Postives = 120/179 (67.04%), Query Frame = 1
Query:  334 FSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTSPS*SLNAVNC 870
            + P ++ +    +V+ D+ +G   AGRI +EL  DV P+TAENFRALCTGE G G       YK SSFHR+IP FMCQ            +SIYG  F DENFV KHTGPG LSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVV GM+VV+ +E+ GS+ G+   PS  +  V+C
Sbjct:  144 YIPSSEKRGKKSRVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGK---PSKRVVIVDC 312          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 2.905e-48
Identity = 93/155 (60.00%), Postives = 110/155 (70.97%), Query Frame = 1
Query:  352 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKV 813
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKG G + GKPLH+KG  FHR+I  FM Q            ESIYG  F DENF  KH   G+LSMANAGP TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V
Sbjct:   11 SNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENV 165          

HSP 2 Score: 20.4014 bits (41), Expect = 2.905e-48
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  828 KDHKPVVIAECGQL 869
            K  K  VIAECG+L
Sbjct:  171 KPAKLCVIAECGEL 184          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.592e-48
Identity = 94/164 (57.32%), Postives = 114/164 (69.51%), Query Frame = 1
Query:  340 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGR 831
            PI +    NP+V+ D+ +G +PAGRI M L +DV P TAENFR LCT EKG G       +KGSSFHR+IP FMCQ            +SIYG  F DENF+ KHTGPG+LSMAN+GP TNGSQFF+   KT+WLDGKHVVFG+V EG+DV++ IE  GS  G+
Sbjct:  131 PIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGK 287          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.592e-48
Identity = 97/174 (55.75%), Postives = 118/174 (67.82%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKVGSSFGRTTSPS*SLNAVNCLKF 879
            M N  +FFD+TV G+P GRI ++ FAD  P+TAENFRAL TGEKG         YKGS FHR+IPGFMCQ            +SIYG  F DEN ++KHTG GILSMANAGP TNGSQFF+CTAKTEWLDGKHV FG+V E +++V+A+E  G    R +  S  +   +C +F
Sbjct:    1 MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGY---RNSKTSKKITIADCGQF 164          
BLAST of DY304955 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 4.935e-48
Identity = 93/155 (60.00%), Postives = 110/155 (70.97%), Query Frame = 1
Query:  352 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVQAIEKV 813
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKG G + GKPLH+KG  FHR+I  FM Q            ESIYG  F DENF  KH   G+LSMANAGP TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V
Sbjct:   11 SNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENV 165          

HSP 2 Score: 20.4014 bits (41), Expect = 4.935e-48
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  828 KDHKPVVIAECGQL 869
            K  K  VIAECG+L
Sbjct:  171 KPAKLCVIAECGEL 184          
The following BLAST results are available for this feature:
BLAST of DY304955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIB_DICDI4.534e-5160.78Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
PPID_RHIOR2.939e-5063.16Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
CYP6_RHIOR3.838e-5057.74Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPID_AMAMU2.676e-4961.22Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPID_EMENI1.710e-4859.49Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIE_RHIOR2.106e-4855.31Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPID_MOUSE2.905e-4860.0040 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPIE_HUMAN3.592e-4857.32Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PAL4A_HUMAN3.592e-4855.75Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
PPID_RAT4.935e-4860.0040 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1BH05RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304955 ID=DY304955; Name=DY304955; organism=Citrus clementina; type=EST; length=1120bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGG
AAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCCAGGC
CATCGAGAAAGTGGGGTCCAGCTTCGGAAGGACCACAAGCCCGTCGTGAT
CGCTGAATGCGGTCAATTGTCTTAAATTTGATCATGATAATGGATCGCAT
CACCCGAACCGTCCGATCGCGATCGTGATGGTGATTATGTTATCTATATT
AAAGTGGCCGTGGCCTGAGGACTTTTAATCTTTACCTAATTTTCCCGGCT
TGTACTTGGTCGGGGTGGGAACGGGCCCCCGGGGGGTGGTTCTGAAGGAA
AGGGTTTTTTTTGTCTTTCCTAAGAAACCTCCCTTTTTAAAAAAAAAAGG
GGCCTTTTCTTTGTTATATT
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