DY305004

Overview
NameDY305004
Unique NameDY305004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1106
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.687e-18
Identity = 44/135 (32.59%), Postives = 63/135 (46.67%), Query Frame = -1
Query:  642 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGAN----ELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPL 1031
            G+   A A A G  + + V     +SGGH+ PA     ++G + SL+RA+LY  AQ LGA+     ++           GGA      LA G   G  +  E + TF  VY  + +  DPKR     H+  +APL
Sbjct:   66 GLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLAT--------GGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPL 186          

HSP 2 Score: 55.4546 bits (132), Expect = 2.687e-18
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            +GF +    LA  P  G G+NPAR FG A++  +   W   W++W+GPF+GA +A   ++Y+L
Sbjct:  188 VGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 3.502e-18
Identity = 43/127 (33.86%), Postives = 64/127 (50.39%), Query Frame = -1
Query:  654 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 1031
            G+   A A AF   +F+ V   A ISGGH+ PA  +   +G   +++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   55 GLVAVAVAHAFA--LFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPI 175          

HSP 2 Score: 50.447 bits (119), Expect = 3.502e-18
Identity = 26/59 (44.07%), Postives = 33/59 (55.93%), Query Frame = -2
Query:  461 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 637
            IGF V    LA  P +G  +NPARSFG AV+      +   WI+W GP IG  +A F +
Sbjct:  177 IGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.554e-18
Identity = 43/127 (33.86%), Postives = 64/127 (50.39%), Query Frame = -1
Query:  654 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 1031
            G+   A A AF   +F+ V   A ISGGH+ PA  +   +G   +++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   55 GLVAVAVAHAFA--LFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPI 175          

HSP 2 Score: 50.447 bits (119), Expect = 4.554e-18
Identity = 26/59 (44.07%), Postives = 33/59 (55.93%), Query Frame = -2
Query:  461 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 637
            IGF V    LA  P +G  +NPARSFG AV+      +   WI+W GP IG  +A F +
Sbjct:  177 IGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.565e-18
Identity = 35/127 (27.56%), Postives = 58/127 (45.67%), Query Frame = -1
Query:  675 VGVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFV-------KAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 1034
            +G+ +   A+AFG  +  + +    ISG H+ PA     V+G +      L Y++AQ +GAI   G +         F+ S      G A+    GY  G G  +E++ T + +  +  ATD +  A
Sbjct:   33 LGIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPA 159          

HSP 2 Score: 54.299 bits (129), Expect = 4.565e-18
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = -2
Query:  476 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFV 637
            IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FWV P IGA +
Sbjct:  166 IGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAI 218          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 5.910e-18
Identity = 38/113 (33.63%), Postives = 54/113 (47.79%), Query Frame = -1
Query:  672 AWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 1010
            A AFG  +  LV     ISG H+ PA     ++G + SL+RA+ Y+VAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   45 ALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          

HSP 2 Score: 54.6842 bits (130), Expect = 5.910e-18
Identity = 23/63 (36.51%), Postives = 41/63 (65.08%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            +GF++ + HL  +  TG G+NPARSF  A++    + + + W++WVGP IGA + +  + ++L
Sbjct:  164 VGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.696e-18
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = -1
Query:  654 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG-LGA---EIIGTFVLVYTVF-SATDPKRSARDSHVPV 1031
            G+   A A AFG  +F+ V   A ISGGH+ PA      +G   +L+R +LY +AQ LG++  C  +K           GG    A G + G G L A   EI+ TF LVYTV+ +A DPK  +  +  P+
Sbjct:   57 GLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPI 177          

HSP 2 Score: 45.4394 bits (106), Expect = 7.696e-18
Identity = 21/60 (35.00%), Postives = 32/60 (53.33%), Query Frame = -2
Query:  458 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQ 637
            IGF V    LA    +G  +NPA +FG AV+      W + W++W GP +G  +A   ++
Sbjct:  179 IGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYE 235          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 7.699e-18
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = -1
Query:  654 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 1031
            G+   A A AF   +F+ V   A ISGGH+ PA  +   +G   +LI    Y +AQCLG+I  C  +  F     N      + ++ G     G+  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   55 GLVAIAIAHAFA--LFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVF---VTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175          

HSP 2 Score: 47.3654 bits (111), Expect = 7.699e-18
Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = -2
Query:  461 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 637
            IGF V    LA  P +G  +NPARSFG AV+          WI+WVGP +G  +A   +
Sbjct:  177 IGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 7.699e-18
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = -1
Query:  654 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 1031
            G+   A A AF   +F+ V   A ISGGH+ PA  +   +G   ++I    Y +AQCLG+I  C  +  F     N      + +A G     G+  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   55 GLVAVAVAHAFA--LFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVF---VTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175          

HSP 2 Score: 48.521 bits (114), Expect = 7.699e-18
Identity = 25/59 (42.37%), Postives = 33/59 (55.93%), Query Frame = -2
Query:  461 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 637
            IGF V    LA  P +G  +NPARSFG AV+      +   WI+WVGP +G  +A   +
Sbjct:  177 IGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.299e-17
Identity = 38/113 (33.63%), Postives = 52/113 (46.02%), Query Frame = -1
Query:  672 AWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 1010
            A AFG  +  LV     ISG H+ PA     ++G + SL+RA  YM AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   45 ALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          

HSP 2 Score: 53.5286 bits (127), Expect = 1.299e-17
Identity = 22/63 (34.92%), Postives = 40/63 (63.49%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            +GF++ + HL  +  TG G+NPARSF  A++    + + + W++WVGP IG  + +  + ++L
Sbjct:  164 VGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.300e-17
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = -1
Query:  642 AFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPL 1016
            A A A    + + V     ISGGH+ PA     ++G + SL+RA+LY VAQ LGA+     ++        R  G A  LA G      +  E + TF L+Y  ++   DPKR     HV  +APL
Sbjct:   64 AVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM--RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPL 181          

HSP 2 Score: 55.0694 bits (131), Expect = 1.300e-17
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = -2
Query:  425 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKAL 637
            +GF +    LA  P  G G+NPAR FG A++  +   W   W++W+GPF+GA +A   ++Y++  +A  A+
Sbjct:  183 VGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAV 250          
The following BLAST results are available for this feature:
BLAST of DY305004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
TIP32_MAIZE2.687e-1832.59Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP2_TOBAC3.502e-1833.86Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC4.554e-1833.86Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_PSEPK4.565e-1827.56Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_SHEEP5.910e-1833.63Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP11_ARATH7.696e-1837.40Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP23_ARATH7.699e-1834.65Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_ARATH7.699e-1834.65Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
MIP_CANFA1.299e-1733.63Lens fiber major intrinsic protein OS=Canis famili... [more]
TIP31_MAIZE1.300e-1734.92Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC10RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305004 ID=DY305004; Name=DY305004; organism=Citrus clementina; type=EST; length=1106bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTGC
CAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAG
AGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGT
CCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATA
CCTGTTGTAATATGATTTTTGGAAAGCCTTCACAAACCCACAACCACAGA
TTGCACCCAAGCACTGTGCTACCATGTACAAAAGAGCTCGGATGAGCGAC
CCCTTGCGCCCCAAGACAGTCCGAATGTCACAAGCCGGTTTGATATGTCC
ACCAGAAATACCGGCTGTGCAGTAAACCAGAATGAAGATCATGCCACCAA
AGGCCCAAGCGAATGCCCAAATGGCCACCCCAACACACCTGGTTCGGTAT
TCCAGTTTGGGAATAATCCTGGGCTTCCTGGACCCCAACCACCGTTCAAA
AAAGGG
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