DY305004

Overview
NameDY305004
Unique NameDY305004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1106
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.207e-17
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            IGF + ++HL +IP+T T +NPARS G A ++    A    W+FWV P +GA + A   + +L
Sbjct:  164 IGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          

HSP 2 Score: 50.8322 bits (120), Expect = 2.207e-17
Identity = 38/120 (31.67%), Postives = 54/120 (45.00%), Query Frame = -1
Query:  693 VGVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSAT 1034
            +G+     A AFG  +  + Y   GISGGH  PA  +   +  +      + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T
Sbjct:   32 LGIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.207e-17
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            IGF + ++HL +IP+T T +NPARS G A ++    A    W+FWV P +GA + A   + +L
Sbjct:  164 IGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          

HSP 2 Score: 50.8322 bits (120), Expect = 2.207e-17
Identity = 38/120 (31.67%), Postives = 54/120 (45.00%), Query Frame = -1
Query:  693 VGVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSAT 1034
            +G+     A AFG  +  + Y   GISGGH  PA  +   +  +      + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T
Sbjct:   32 LGIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.855e-17
Identity = 36/117 (30.77%), Postives = 54/117 (46.15%), Query Frame = -1
Query:  672 IWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 1022
            +   A AFG ++  +V     +SG HI PA     ++G + SL RA+ Y+ AQ LGA+ G   +     +   R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   41 VLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAI-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          

HSP 2 Score: 53.1434 bits (126), Expect = 2.855e-17
Identity = 24/63 (38.10%), Postives = 38/63 (60.32%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            IGF++ + HL  +  TG  +NPARSF  AV+    + + + W++WVGP IG  +    + +IL
Sbjct:  164 IGFSLTLGHLFGLYYTGASMNPARSFAPAVL---TRNFTNHWVYWVGPIIGGALGGLVYDFIL 223          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.861e-17
Identity = 42/122 (34.43%), Postives = 60/122 (49.18%), Query Frame = -1
Query:  654 AFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 1016
            A A   G  +F+ V   A ISGGH+ PA      LG + +++  + Y +AQ LGAI G   V+         +G        G     G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   59 AVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPI 174          

HSP 2 Score: 49.6766 bits (117), Expect = 2.861e-17
Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = -2
Query:  452 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 637
            IGF V    L   P +G  +NPARSFG AV       + + WI+WVGP +G  +A   ++Y+
Sbjct:  176 IGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.730e-17
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            IGF + ++HL +IP+T T +NPARS G A ++    A    W+FWV P +GA + A   + +L
Sbjct:  164 IGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          

HSP 2 Score: 50.447 bits (119), Expect = 3.730e-17
Identity = 38/120 (31.67%), Postives = 54/120 (45.00%), Query Frame = -1
Query:  693 VGVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSAT 1034
            +G+     A AFG  +  + Y   GISGGH  PA  +   +  +      + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T
Sbjct:   32 LGIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 4.826e-17
Identity = 37/113 (32.74%), Postives = 52/113 (46.02%), Query Frame = -1
Query:  672 AWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 1010
            A AFG  +  LV     ISG H+ PA     ++G + SL+RA  Y+ AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   45 ALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          

HSP 2 Score: 53.9138 bits (128), Expect = 4.826e-17
Identity = 22/63 (34.92%), Postives = 40/63 (63.49%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            +GF++ + HL  +  TG G+NPARSF  A++    + + + W++WVGP IG  + +  + ++L
Sbjct:  164 VGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 4.828e-17
Identity = 37/113 (32.74%), Postives = 52/113 (46.02%), Query Frame = -1
Query:  672 AWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 1010
            A AFG  +  LV     ISG H+ PA     ++G + SL+RA  Y+ AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:   43 ALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 154          

HSP 2 Score: 53.9138 bits (128), Expect = 4.828e-17
Identity = 22/63 (34.92%), Postives = 40/63 (63.49%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            +GF++ + HL  +  TG G+NPARSF  A++    + + + W++WVGP IG  + +  + ++L
Sbjct:  162 VGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 221          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.850e-17
Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = -2
Query:  449 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 637
            IGF + ++HL +IP+T T +NPARS G A ++    A    W+FWV P +GA + A   + +L
Sbjct:  164 IGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          

HSP 2 Score: 50.8322 bits (120), Expect = 4.850e-17
Identity = 38/120 (31.67%), Postives = 54/120 (45.00%), Query Frame = -1
Query:  693 VGVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSAT 1034
            +G+     A AFG  +  + Y   GISGGH  PA  +   +  +      + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T
Sbjct:   32 LGIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.257e-17
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = -2
Query:  473 PIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVA 640
            PIG ++FM H+A    TGTG+NPARS GAAV       +   WI+W+GP +GAF+A
Sbjct:  208 PIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          

HSP 2 Score: 45.4394 bits (106), Expect = 6.257e-17
Identity = 32/110 (29.09%), Postives = 45/110 (40.91%), Query Frame = -1
Query:  681 AWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 1010
            A  FG  +   ++C AG+SGG + PA  +   L R  S  R ++    Q +  +   G   A             N L  G ++  GL  E+ GT VL  TV      KR
Sbjct:   94 ALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVL----FTNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKR 199          
BLAST of DY305004 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 6.286e-17
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = -1
Query:  642 GVAIWAFAWAFGGMIFILVYCTAGISGGHIKPACDIRTVLGRKGSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPL 1031
            G+   + A AF   +F+ V   A ISGGH+ PA      +G   +L+R ++Y++AQ LG+I     +     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+
Sbjct:   57 GLISASIAHAFA--LFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPI 175          

HSP 2 Score: 48.1358 bits (113), Expect = 6.286e-17
Identity = 23/62 (37.10%), Postives = 33/62 (53.23%), Query Frame = -2
Query:  452 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 637
            IGF V    L     TG  +NPA SFG AV+     +W + W++W GP IG  +A   ++ +
Sbjct:  177 IGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
The following BLAST results are available for this feature:
BLAST of DY305004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
AQPZ_BRUAB2.207e-1741.27Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA22.207e-1741.27Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
MIP_RANPI2.855e-1730.77Lens fiber major intrinsic protein OS=Rana pipiens... [more]
TIP22_ORYSJ2.861e-1734.43Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
AQPZ_BRUSU3.730e-1741.27Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
MIP_MOUSE4.826e-1732.74Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_RAT4.828e-1732.74Lens fiber major intrinsic protein (Fragment) OS=R... [more]
AQPZ_BRUME4.850e-1741.27Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQY2_YEAST6.257e-1751.79Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
TIP1_MEDSA6.286e-1733.59Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC10RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305004 ID=DY305004; Name=DY305004; organism=Citrus clementina; type=EST; length=1106bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTGC
CAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAG
AGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGT
CCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATA
CCTGTTGTAATATGATTTTTGGAAAGCCTTCACAAACCCACAACCACAGA
TTGCACCCAAGCACTGTGCTACCATGTACAAAAGAGCTCGGATGAGCGAC
CCCTTGCGCCCCAAGACAGTCCGAATGTCACAAGCCGGTTTGATATGTCC
ACCAGAAATACCGGCTGTGCAGTAAACCAGAATGAAGATCATGCCACCAA
AGGCCCAAGCGAATGCCCAAATGGCCACCCCAACACACCTGGTTCGGTAT
TCCAGTTTGGGAATAATCCTGGGCTTCCTGGACCCCAACCACCGTTCAAA
AAAGGG
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