DY305059

Overview
NameDY305059
Unique NameDY305059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1198
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: SRC64_DROME (Tyrosine-protein kinase Src64B OS=Drosophila melanogaster GN=Src64B PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 61/242 (25.21%), Postives = 113/242 (46.69%), Query Frame = 1
Query:    7 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVPDSNCTCPLDWAFHLHRSGTLMELVDP--RLGSEFNKVEAERMIKIALLCTNASPSLRPTMSEVVSMLEGSSNIPDV 726
            FL E A++   +H  LV ++  C + + + +V EYM   SL   L  G+   L     +   I   +A G+ +L  +   +++HRD+ A NVL+  +   KI DFGLA++  +++          + + APE  ++G  + K+DV+S+G++ +E+ +       VP           +    S  ++E ++   R+    N    + + ++ L C +A P  RPT   +    E  S   +V
Sbjct:  324 FLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIY--IATQVASGMEYLESK---QLIHRDLAARNVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFT----YGQVP-----------YPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFESFSVTSEV 545          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: SHKE_DICDI (Dual specificity protein kinase shkE OS=Dictyostelium discoideum GN=shkE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 1
Query:    7 FLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTR-VAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 477
            F  E+ ++  + HPN+V   G C +  ++++V E M+ + L   +   E     L    R K+CL  A G+ +LH      I+HRD+K  N+++ +D   KI DFG +++ +   T    +   GT  YMAPE  +      KADVYSFG++  E+ +
Sbjct:  279 FKNEVEIMKQIFHPNVVLCLGACTKPGKVMIVSELMQTD-LEKLIHSSEVEPPPLY--ERMKMCLDAALGINWLH--GICNIIHRDLKLANLMISKDKTVKIGDFGFSQVIKTGTTLSDQKGPKGTALYMAPEVMMKHEFNEKADVYSFGLILYEMAT 431          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 56/168 (33.33%), Postives = 86/168 (51.19%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALFGGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEEEKTHISTRVAGTIG-----YMAPEYALWGYLTYKADVYSFGVVALEIVSG 480
            EF  E+ + + L HP++V + G C+  D   +V EY+ N +L   L     S   + W ++ KI + IA  +  +H  +  KI HRD+K+ N+L+  D+N     K+SDFG       E   + T   G        +++PE       T KADVYSFG+V  EI++G
Sbjct: 2220 EFRREVWLSNTLTHPSIVSLKGYCL--DPCCIVMEYIPNGTLYSHL---RKSFSSITWQLKLKIAINIADAIKHMHGFTP-KICHRDLKSPNILMLSDMNAAVVCKVSDFG-------ETRAVVTSALGRDKLSNPIWLSPEIMRGDEYTEKADVYSFGIVLWEILTG 2374          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: NTRK3_PANTR (NT-3 growth factor receptor OS=Pan troglodytes GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G C +GD L++V+EYM++  L          A  L  G+  Q K    + Q + +   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+SFGV+  EI
Sbjct:  584 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 749          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: NTRK3_MOUSE (NT-3 growth factor receptor OS=Mus musculus GN=Ntrk3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G C +GD L++V+EYM++  L          A  L  G+  Q K    + Q + +   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+SFGV+  EI
Sbjct:  584 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 749          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: NTRK3_MACFA (NT-3 growth factor receptor OS=Macaca fascicularis GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G C +GD L++V+EYM++  L          A  L  G+  Q K    + Q + +   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+SFGV+  EI
Sbjct:  584 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 749          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: NTRK3_CHICK (NT-3 growth factor receptor OS=Gallus gallus GN=NTRK3 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSL----------AHALFGGENSQLKLNWPVRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 471
            +F  E  +++ LQH ++VK +G C +GD L++V+EYM++  L          A  L  G+  Q K    + Q + +   IA G+ +L  +     VHRD+   N L+  +L  KI DFG+++ +   +   +       I +M PE  ++   T ++DV+SFGV+  EI
Sbjct:  586 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 751          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: EPHA4_MOUSE (Ephrin type-A receptor 4 OS=Mus musculus GN=Epha4 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 477
            +FL E +++    HPN++ + G   +   ++++ EYMEN SL   L    G  + ++L   +R     GI  G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ E++     T   G   I + APE   +   T  +DV+S+G+V  E++S
Sbjct:  666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: EPHA4_HUMAN (Ephrin type-A receptor 4 OS=Homo sapiens GN=EPHA4 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 477
            +FL E +++    HPN++ + G   +   ++++ EYMEN SL   L    G  + ++L   +R     GI  G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ E++     T   G   I + APE   +   T  +DV+S+G+V  E++S
Sbjct:  666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
BLAST of DY305059 vs. ExPASy Swiss-Prot
Match: EPHA4_CHICK (Ephrin type-A receptor 4 OS=Gallus gallus GN=EPHA4 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 8.334e-14
Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 1
Query:    4 EFLYEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAHALF--GGENSQLKLNWPVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAG--TIGYMAPEYALWGYLTYKADVYSFGVVALEIVS 477
            +FL E +++    HPN++ + G   +   ++++ EYMEN SL   L    G  + ++L   +R     GI  G+ +L + S    VHRD+ A N+L++ +L  K+SDFG++++ E++     T   G   I + APE   +   T  +DV+S+G+V  E++S
Sbjct:  666 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 819          
The following BLAST results are available for this feature:
BLAST of DY305059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRC64_DROME8.334e-1425.21Tyrosine-protein kinase Src64B OS=Drosophila melan... [more]
SHKE_DICDI8.334e-1432.28Dual specificity protein kinase shkE OS=Dictyostel... [more]
ROCO5_DICDI8.334e-1433.33Probable serine/threonine-protein kinase roco5 OS=... [more]
NTRK3_PANTR8.334e-1430.77NT-3 growth factor receptor OS=Pan troglodytes GN=... [more]
NTRK3_MOUSE8.334e-1430.77NT-3 growth factor receptor OS=Mus musculus GN=Ntr... [more]
NTRK3_MACFA8.334e-1430.77NT-3 growth factor receptor OS=Macaca fascicularis... [more]
NTRK3_CHICK8.334e-1430.77NT-3 growth factor receptor OS=Gallus gallus GN=NT... [more]
EPHA4_MOUSE8.334e-1431.48Ephrin type-A receptor 4 OS=Mus musculus GN=Epha4 ... [more]
EPHA4_HUMAN8.334e-1431.48Ephrin type-A receptor 4 OS=Homo sapiens GN=EPHA4 ... [more]
EPHA4_CHICK8.334e-1431.48Ephrin type-A receptor 4 OS=Gallus gallus GN=EPHA4... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AF05RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305059 ID=DY305059; Name=DY305059; organism=Citrus clementina; type=EST; length=1198bp
GGTGAATTCTTATATGAGATAGCCATGATTTCGTGTTTGCAACACCCAAA
TCTTGTTAAAATTCATGGCTGTTGTGTTGAAGGGGATCAACTCTTGCTAG
TATATGAATACATGGAAAACAACAGCCTTGCCCATGCTTTATTCGGTGGC
GAAAACAGTCAACTGAAATTGAACTGGCCAGTGAGGCAGAAGATCTGCCT
TGGGATAGCCAGAGGTTTAGCTTTTCTACATGAAGAATCCAGATTCAAAA
TAGTTCATAGAGACATCAAAGCTACGAATGTTCTGCTAGATAGAGATTTA
AACCCCAAAATATCTGACTTTGGACTGGCTAAGCTTGATGAGGAGGAAAA
AACTCACATCAGTACTCGAGTTGCTGGAACAATAGGATATATGGCACCAG
AGTACGCTCTATGGGGTTACTTGACCTACAAAGCAGATGTTTACAGTTTC
GGAGTTGTGGCTTTGGAAATCGTCAGTGGGAAGAATAATATGAGTTATGT
GCCAGACAGTAATTGCACCTGTCCTCTTGACTGGGCCTTCCATTTACACC
GAAGTGGTACGTTAATGGAGTTAGTGGATCCAAGGCTCGGATCAGAATTC
AACAAGGTTGAAGCAGAGAGAATGATTAAAATAGCACTCTTATGCACCAA
TGCGTCACCTTCACTAAGGCCAACCATGTCTGAAGTGGTAAGCATGCTGG
AAGGATCTTCTAACATTCCGGATGTAATCCCTGAAGCCGGTGGTTTGAGT
GAAGACTTGAGGTTTAAAACTCTAGAGACCATCCAAAAGAAAAGAATAGT
TCGGGTTTGGAAGGAAGTCTGTCTCATTAATCATCCGCACCCAGCTTCTT
GCCTGGTTCTTCCTCTACCGATGAATGTCCTGAAATTAATGCAGAAGCAT
ATTTGAAATTTAAGGGCCATGAAAAAACATCTATTTCTTATGGAAAAACA
AAAAATGGGTTGCCCAATATACAAAACCCGTCCCCCTCCAGGGAACTGGT
TTTTTAAAAATCCTCCCCCGTGATTTTTCCCAACCCAAATTTTAAATTCC
CGCGAGAAGGGCCAAAAACCCTCCCCCAAGCCAAATTTTTCAGTTTTTAA
AACTTTCAACTTTTTTTTTTGAAACCAACCCCCATATGTGTGCCCAAACC
CTCCCCCCCCCACCCCCTTTTGTTTTTCCCAAAAAAATTTTTTCTCCC
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