DY305188

Overview
NameDY305188
Unique NameDY305188
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1109
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 4.952e-66
Identity = 119/171 (69.59%), Postives = 135/171 (78.95%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            M   KVFFD+T+GG+ +GRIVMEL+ DV P+TA NFRALCTGE GIGKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+VVEG+DVVKA+E  GS SG+  K  +IADCG L
Sbjct:    1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQL 171          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 2.457e-65
Identity = 115/171 (67.25%), Postives = 133/171 (77.78%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            M  P+VFFD+T+ G+P GRIVMEL+ D+ P+TAENFRALCTGEKG+GKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KT WLDGKHVVFG+VVEG+D+V  +E  GSSSG      +IADCG L
Sbjct:    1 MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQL 171          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 4.192e-65
Identity = 119/169 (70.41%), Postives = 133/169 (78.70%), Query Frame = 1
Query:  364 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            NP+VFFD+T+GG  AG++VMEL+A+  P+TAENFRALCTGEKGIGKSGKPL YKGSSFHRVI  FMCQ            ESIYG+KFADENF  KH G G LSMANAG  TNGSQFF+C A T+WLDGKHVVFG V EGMDVVK +E  GS SG+T KPVVIA+CG L
Sbjct:   11 NPRVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.593e-64
Identity = 119/151 (78.81%), Postives = 127/151 (84.11%), Query Frame = 1
Query:  421 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHLS 873
            MELF DV P+TAENFRALCTGEKG+G   KPLHYKGSSFHRVIPGFMCQ            ESIYG+KF DENF+KKHTGPG+LSMANAGPGTNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+AIEKVGS SG+T KPV IADCG LS
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 1.032e-63
Identity = 115/171 (67.25%), Postives = 131/171 (76.61%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            MP  KVFFD+T+GG+  GRIVMEL+ D+ P+TAENFRALCTGEKG GKSGK LH+KGS FHR+IP FM Q            ESI+G KF DENF +KHTGPG+LSMAN G  TNGSQFF+CT KT WLDGKHVVFG+V+EGMDVVKAIE  GS  G  + P VIADCG +
Sbjct:    1 MPRVKVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGEM 171          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 7.399e-62
Identity = 113/168 (67.26%), Postives = 127/168 (75.60%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            PKVFFD+++G +PAGR+ MELF DV P+TAENFRALCTGEKG+G+ G  LH+KGS FHR+IP FM Q            ESIYG+KF DENF  KHTGPG LSMANAGP TNGSQFF+CT  T WLDG HVVFGQV +GM VVK IEK+GS SG   K V IADCG L
Sbjct:   22 PKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIADCGEL 189          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 2.153e-61
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            M NP VFFD+T  G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM +V+A+E+ GS +G+T+K + I+DCG L
Sbjct:    1 MVNPTVFFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGKTSKKITISDCGQL 164          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 3.672e-61
Identity = 114/178 (64.04%), Postives = 129/178 (72.47%), Query Frame = 1
Query:  340 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHLS 873
            P + S   NP V+ D+   G+P GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGSQFF+CT KT+WLDGKHVVFG V EGMDVVK IE  GS SGRT+K +VI DCG LS
Sbjct:   37 PSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQLS 207          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 235.343 bits (599), Expect = 4.796e-61
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCG L
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
BLAST of DY305188 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 4.796e-61
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGHL 870
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCG L
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164          
The following BLAST results are available for this feature:
BLAST of DY305188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYP3_CAEEL4.952e-6669.59Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYP7_CAEEL2.457e-6567.25Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIA_DICDI4.192e-6570.41Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYPH_ALLCE1.593e-6478.81Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
CYP2_CAEEL1.032e-6367.25Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYP1_CAEEL7.399e-6267.26Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
PPIA_RAT2.153e-6165.50Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIF_HUMAN3.672e-6164.04Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_PONPY4.796e-6165.50Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN4.796e-6165.50Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2DD02RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305188 ID=DY305188; Name=DY305188; organism=Citrus clementina; type=EST; length=1109bp
TGCCTAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGG
AAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGC
CATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCGTCGTGA
TCGCTGATTGCGGTCATTTGTCTTAAATTTGATCATGATAATGATCCCCC
ATCATCACAAGCCGTCCGATCGCGATCGGGATGGTGATTAAGTTATCTAT
TATTAAGGTGGCCGCGGTCTGGTAGAACTTTTAATCTTTTATCTAATTTT
CCTGCTAAGGTTACCTTGGTCCGGGGTGGGAATCGGGCCCTCCGGGGGGG
GGGTTTTTTGAAGGAACACGGTTTTTTTAAGGCTCTTTTCATAAAAACCG
GCCCTTTTT
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