DY305230

Overview
NameDY305230
Unique NameDY305230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 3.912e-87
Identity = 163/217 (75.12%), Postives = 177/217 (81.57%), Query Frame = -3
Query:  404 PNPGGGGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 1051
            P+   GGV   G  W    GGMIF LV+  AG  GGH NP  TFGL    KVSL+RA LY++AQ LGA CG G  + FQ +YY RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNK+KAWDDQWIFWVGP IGA +AA YHQY+LRA+A K LGS+RSNA
Sbjct:   76 PDAACGGVGILGIAWA--FGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 289          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 8.715e-87
Identity = 162/212 (76.42%), Postives = 172/212 (81.13%), Query Frame = -3
Query:  404 GGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 1036
            GGV   G  W    GGMIF LV+  AG  GGH NP  TFGL    KVSLIRA LYMVAQ LGA CG GF + FQ S+Y  YGGGAN LADGYN GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI+NK K WDD WIFWVGPFIGA +AAFYHQ++LRA+  K+LGSFRS A
Sbjct:   74 GGVGILGIAWA--FGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRSAA 283          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 2.536e-86
Identity = 157/198 (79.29%), Postives = 170/198 (85.86%), Query Frame = -3
Query:  404 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 997
            GGMIF LV+  AG  GGH NP  TFGL    KVSLIRA LY++AQ LGA CG G  + FQ SYY RYGGGANEL+DGY+KGTGLGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G AVIYNK+KAWDDQWIFWVGP IGA +AA YHQY+LRA+A K LGS+RSNA
Sbjct:   92 GGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSNA 288          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 6.245e-85
Identity = 151/197 (76.65%), Postives = 165/197 (83.76%), Query Frame = -3
Query:  407 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 997
            GGMIF LV+  AG  GGH NP  TFGL    KVSL+RA +YM+AQ  GA CG G  + F K  YN++GGGAN +A GYNKGT  GAE+IGTFVLVYTVFSATDPKRSARDSHVP+LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNK++ WDD WIFWVGPF+GA  AA YHQY+LRAAAIKALGSFRSN
Sbjct:   83 GGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALGSFRSN 279          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 1.065e-84
Identity = 161/211 (76.30%), Postives = 167/211 (79.15%), Query Frame = -3
Query:  407 GGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 1036
            GGV   G  W    GGMIF LV+  AG  GGH NP  TFGL    KVSL RA  YMVAQ LGA CG G  + F  + Y R GGGAN +ADGY+ GT LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN EKAWDD WIFWVGPF+GA  AA YHQYILRAAAIKAL SFRSN
Sbjct:   67 GGVGLLGIAWA--FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALASFRSN 275          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 9.018e-84
Identity = 149/196 (76.02%), Postives = 166/196 (84.69%), Query Frame = -3
Query:  410 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 997
            GGMIF LV+  AG  GGH NP  TFGL+   KV+L+RA +YMVAQ LGA CG    + FQ +Y+ RYGGGAN L+DGY+ GTG+ AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+KAWD  WIFWVGPF GA +AAFYHQ++LRA AIKALGSFRS
Sbjct:   87 GGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRS 282          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 4.476e-83
Identity = 156/212 (73.58%), Postives = 170/212 (80.19%), Query Frame = -3
Query:  404 GGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 1036
            GGV   G  W    GGMIF LV+  AG  GGH NP  TFGL    KVSL+RA LY+VAQ LGA CG    + FQ S+Y+RYGGGANELA GY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YN  KAW DQWIFWVGPFIGA +AA YHQ +LRA+A +  GSFRSNA
Sbjct:   75 GGVGVLGIAWA--FGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 283          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 2.221e-82
Identity = 157/215 (73.02%), Postives = 171/215 (79.53%), Query Frame = -3
Query:  410 PNPGGGGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 1051
            P+   GGV   G  W    GGMIF LV+  AG  GGH NP  TFGL    KVSL+RA LY+VAQ LGA CG G  + FQ ++Y RYGGGANEL+ GY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN +KAWDD WIFWVGPFIGA +AA YHQY+LRA+A K LGS  S
Sbjct:   71 PDAACGGVGVLGIAWA--FGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK-LGSSAS 282          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 2.456e-81
Identity = 153/217 (70.51%), Postives = 167/217 (76.96%), Query Frame = -3
Query:  404 PNPGGGGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 1051
            P+    GV   G  W    GGMIF LV+  AG  GGH NP  TFGL    KVSL+RA LYM AQ LGA CG    + FQ  +Y RYGGGANE++ GY+ GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAV+YN  KAW DQWIFWVGPFIGA +AA YHQ +LRA+A +  GSFRSNA
Sbjct:   75 PDAACSGVGILGIAWA--FGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 288          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 3.207e-81
Identity = 155/211 (73.46%), Postives = 166/211 (78.67%), Query Frame = -3
Query:  407 GGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSN 1036
            GGV   G  W    GGMIF LV+  AG  GGH NP  TFGL+   KVS+IRA +Y+VAQ LG   G G  +   K  YN  GGGAN +A GY+ GT LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN++KAWDD WIFW GPFIGA  AA YHQYILRAAAIKALGSFRSN
Sbjct:   71 GGVGTLGIAWA--FGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSN 279          
The following BLAST results are available for this feature:
BLAST of DY305230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
PIP23_MAIZE3.912e-8775.12Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP23_ARATH8.715e-8776.42Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_ORYSJ2.536e-8679.29Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA6.245e-8576.65Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP28_ARATH1.065e-8476.30Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP25_ARATH9.018e-8476.02Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ4.476e-8373.58Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP25_MAIZE2.221e-8273.02Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP26_MAIZE2.456e-8170.51Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP26_ORYSJ3.207e-8173.46Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305230 ID=DY305230; Name=DY305230; organism=Citrus clementina; type=EST; length=1113bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCC
AAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGA
GAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTC
CGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATAC
CTGTTGTAATATGATTTTTGGAAAACCCTTCCAAACCCACAACCACAGAA
TGCACCCAAGCCCTGTGCTACCATGTACAAAAAAGCTCGAATAAGCGACA
CTTTGCCCCCCCAGACCAATCCAAATGTCCAACCCGGGTTGAAATGTCCC
CCAAAAAACCCGGCTGGGCCAAAAACCAAAAAGAAAATCATGCCACCCAA
GGGCCCCAACCAATGCCCAAAAAAGGCCACACCCCCCCCCCCCGGATTAG
GATATTTCAATTTGGGAAATAATCTGGGCCTCTTTTATACCCCACCCCCA
GTCACAAAAAGGG
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