DY305230

Overview
NameDY305230
Unique NameDY305230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.268e-17
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = -3
Query:  449 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGA-NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 952
            G H NP  TF  + G ++SL+RAF YM AQ LGA  G     ++  +     G  A N L    + G     EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARSF  A++      + + W++WVGP IG  + +  + ++L
Sbjct:   64 GAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAV--LYSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 4.268e-17
Identity = 57/174 (32.76%), Postives = 85/174 (48.85%), Query Frame = -3
Query:  449 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGG------GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 952
            G H NP  T   + G  +SL RA  Y+ AQ +GA  G           Y    G      G N + +  + G  +  E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARSFG A+I  K   +   W+FWVGP +GA +A+  + ++L
Sbjct:   78 GAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAAL-------LYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.574e-17
Identity = 62/203 (30.54%), Postives = 92/203 (45.32%), Query Frame = -3
Query:  473 YPNPGGG--GVAFFGHWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRV-------FQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVA 1054
            +P  G G  GV+F        G  +  + +   G  GGHFNP  + GL   G+V       Y++AQ  GA        V       FQ   +   G G +    GY+    L  E++ TF  +  +  +T  +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FW+ P  GA +A
Sbjct:   29 FPQVGIGLLGVSF------AFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHS-PGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQA-LFVGGWALSQLWLFWIAPLFGAAIA 217          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.574e-17
Identity = 64/203 (31.53%), Postives = 95/203 (46.80%), Query Frame = -3
Query:  473 YPNPGGG--GVAFFGHWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQ--KSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVA 1054
            +P  G G  GV+F        G  +  + +   G  GGHFNP  + GL   G++       Y++AQ  GA        V    K+ +   G  AN   +    GY+    L  E++ T   +  +  +T        S VPV  AP+ IG  + ++HL +IP+T T +NPARS G A ++  + A    W+FWV P IGA +A
Sbjct:   29 FPEVGIGLLGVSF------AFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGSTH-------SRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAISQLWLFWVAPLIGAVIA 217          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.242e-16
Identity = 57/172 (33.14%), Postives = 89/172 (51.74%), Query Frame = -3
Query:  449 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIG---TFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 952
            GGH NP  TF +   G++S+  A  Y  +Q + +   C   +V     +      A E+       TG GA ++     FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA +FG+A++Y   K   +Q ++WVGP +G   AA  +  ++
Sbjct:   83 GGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEM-------TGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVYDNVV 239          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.766e-16
Identity = 65/209 (31.10%), Postives = 94/209 (44.98%), Query Frame = -3
Query:  452 GVAFFGHWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFC-----------GCGF--GRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQ--WIFWVGPFIGAFVAAFYHQYI 1033
            G+ F G  L   G  +  + +      G H NP  + GL  GG+    +   Y+VAQ LGA             G GF   + F  + Y  +  G      GY+    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IP+T T +NPARS G A+       W  Q  W+FW+ P IGA + A  ++ I
Sbjct:   32 GIGFAGVALA-FGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.613e-16
Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3
Query:  458 AGFF--GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQ 964
            AGF   GGH NP  T GL+  G ++ +RA LY+ AQ L +   C   R              + L  G +   GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARSFG A+       W + W++W+GP +G  +A F ++
Sbjct:   79 AGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVT----PVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGD---WTNHWVYWIGPLLGGPLAGFVYE 238          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.718e-16
Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = -3
Query:  458 AGFF--GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQ 964
            AGF   GGH NP  T G++  G ++ +RA LY+ AQ L +   C   R              + L  G     GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARSFG A+       W + W++W+GP +G  +A F ++
Sbjct:   81 AGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVT----PVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG---VWTNHWVYWIGPLLGGSLAGFVYE 240          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.718e-16
Identity = 58/175 (33.14%), Postives = 78/175 (44.57%), Query Frame = -3
Query:  473 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVA 997
            G  + F ++  AG  GG  NP  +  L     +S  R  +    Q +      G                 N L  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++FM H+A    TGTG+NPARS GAAV       +   WI+W+GP +GAF+A
Sbjct:   98 GFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLF----TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.162e-16
Identity = 67/204 (32.84%), Postives = 93/204 (45.59%), Query Frame = -3
Query:  470 YPNPGGG--GVAFFGHWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGG--ANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAA 1054
            +P  G G  GVAF        G  +  + +   G  GGHFNP  + GL   GK        Y+VAQ LGA        V          GG  AN   +    GY+  + L  EII T   +  +  +T  +       VPV  AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FW+ P +G  + A
Sbjct:   29 FPELGIGFLGVAF------AFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPILGGAIGA 218          
The following BLAST results are available for this feature:
BLAST of DY305230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
MIP_HUMAN4.268e-1733.14Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQP6_HUMAN4.268e-1732.76Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQPZ2_RHIME5.574e-1730.54Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQPZ1_RHIME5.574e-1731.53Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
TIP51_ARATH1.242e-1633.14Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
AQPZ_CHRVO2.766e-1631.10Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP41_MAIZE3.613e-1633.72Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP42_MAIZE4.718e-1633.14Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
AQY2_YEAST4.718e-1633.14Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQPZ1_AGRT56.162e-1632.84Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305230 ID=DY305230; Name=DY305230; organism=Citrus clementina; type=EST; length=1113bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCC
AAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGA
GAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTC
CGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATAC
CTGTTGTAATATGATTTTTGGAAAACCCTTCCAAACCCACAACCACAGAA
TGCACCCAAGCCCTGTGCTACCATGTACAAAAAAGCTCGAATAAGCGACA
CTTTGCCCCCCCAGACCAATCCAAATGTCCAACCCGGGTTGAAATGTCCC
CCAAAAAACCCGGCTGGGCCAAAAACCAAAAAGAAAATCATGCCACCCAA
GGGCCCCAACCAATGCCCAAAAAAGGCCACACCCCCCCCCCCCGGATTAG
GATATTTCAATTTGGGAAATAATCTGGGCCTCTTTTATACCCCACCCCCA
GTCACAAAAAGGG
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