DY305230

Overview
NameDY305230
Unique NameDY305230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.381e-14
Identity = 55/176 (31.25%), Postives = 84/176 (47.73%), Query Frame = -3
Query:  476 GMIFFLVFGPAG-FFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFV 994
            G+   LV    G   GGHFNP  +   +  G ++L+    Y V+Q LG   G    +    ++ ++N  G     + +       L AEII T +L   V      +++        LAP  IGFAV +  LA  P++G  +NPAR+FG AV+ N    W+  WI+W+GP +   +
Sbjct:   73 GLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKGP-----LAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVVANH---WNFHWIYWLGPLLAGLL 240          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.768e-14
Identity = 56/185 (30.27%), Postives = 85/185 (45.95%), Query Frame = -3
Query:  452 GMIFFLVFGPAG-FFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFI-GAFVAAFYHQYI 994
            G+   L+    G   GGHFNP  +  +   G +  +    Y ++Q  G   G    +V   ++ ++N  G     + +       LG EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD  WI+W+GP + G FV      +I
Sbjct:   73 GLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAG---YWDFHWIYWLGPLLAGLFVGLLIRLFI 249          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.285e-13
Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = -3
Query:  476 GMIFFLVFGPAG-FFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFI-GAFV 994
            G+   L+    G   GGHFNP  +  +   G +  +    Y ++Q  G   G    +V   ++ ++N  G     + +       LG EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD  WI+W+GP + G FV
Sbjct:   73 GLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLLAGLFV 241          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.192e-13
Identity = 60/187 (32.09%), Postives = 81/187 (43.32%), Query Frame = -3
Query:  458 IFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGG----ANELADGYNKGTGLGAEIIGTFVLVYT--VFSATDPKR----SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQ 988
            +F  V   A   GGH NP  TF    GG++ +  A  Y  +Q LGA   C           N +  G       +A       G   E + TF+LVYT  V    +P+       R+     L  L +G       LA   +TG  +NPARSFG AV+    K   +Q ++W GP +GA VAA  +Q
Sbjct:   69 LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFAC--------LSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFK---NQAVYWAGPMVGAAVAALVYQ 244          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.192e-13
Identity = 53/180 (29.44%), Postives = 82/180 (45.56%), Query Frame = -3
Query:  452 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGC-----------GFG--RVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 952
            G H NP  T GL  GG+    +   Y++AQ  GA               GF   + F  + Y+ +  G       Y+       E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    W+FWV P IG  +    ++++
Sbjct:   60 GCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGALGGVIYRWL 226          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 2.051e-11
Identity = 51/185 (27.57%), Postives = 84/185 (45.41%), Query Frame = -3
Query:  452 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 997
            G ++  LV+      GGHFNP  T       +  LI+   Y+VAQ LG+    G  R+     ++++ G           GT L A   E I TF L++ +       R+     V   A + IG  + +  +   P+TG  +NPARS G A ++ +   ++  WI+ + P +GA   A+ +  +
Sbjct:   78 GLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSGTV-------PNGTNLQAFVFEFIMTFFLMFVICGVATDNRA-----VGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGE---YEGIWIYLLAPVVGAIAGAWVYNIV 247          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.679e-11
Identity = 48/170 (28.24%), Postives = 70/170 (41.18%), Query Frame = -3
Query:  443 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 952
            G H NP  T  L     +S IRA +Y+ AQ  G   G           Y      A   +         G E I TF++V   F +TDP +    +     +   IG A       ++P     +NPARS G + + NK   WD  W++W GP +G   +   ++YI  +
Sbjct:  122 GAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFGPLVGGMASGLVYEYIFNS 279          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.570e-11
Identity = 52/187 (27.81%), Postives = 86/187 (45.99%), Query Frame = -3
Query:  452 GMIFFLVFGPAGFFGG-HFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCG----FGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 994
            G+I  ++    G+  G HFNP  T      G+    +  LY++AQ +G+    G       V  ++Y+     G+N        G  L  EII +F+L++ +   ATD      D  +  +A + +G  + +      PI+G  +NPARS G A++   +  +   W++ VGP IG    AF +  I
Sbjct:   82 GLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSN--------GQSLAIEIIISFLLMFVISGVATD------DRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIV---KHVYTGLWVYVVGPIIGTLAGAFVYNLI 251          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.969e-11
Identity = 50/182 (27.47%), Postives = 82/182 (45.05%), Query Frame = -3
Query:  452 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 997
            G  +  +V+      G HFNP  T      G+    +   Y++AQ LGA    G  R+     +  + G    L  G ++   L  EII TF L++ +       R+  +     LA L +G  + +  L   P++G  +NPARS G A++  +   +   W++ VGP +GA   A+ +  I
Sbjct:   84 GLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPG---TLPTG-SEVQSLVIEIITTFYLMFVISGVATDNRAIGE-----LAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGE---YTSIWVYVVGPVVGAVAGAWAYNLI 253          
The following BLAST results are available for this feature:
BLAST of DY305230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
AQP8_HUMAN3.381e-1431.25Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
AQP8_NOTAL5.768e-1430.27Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE1.285e-1331.07Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
TIP51_MAIZE2.192e-1332.09Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
AQPZ_BRAJA2.192e-1329.44Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
NO26_SOYBN2.051e-1127.57Nodulin-26 OS=Glycine max PE=1 SV=2[more]
BIB_DROME2.679e-1128.24Neurogenic protein big brain OS=Drosophila melanog... [more]
NIP1_NICAL4.570e-1127.81Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
NIP11_MAIZE5.969e-1127.47Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305230 ID=DY305230; Name=DY305230; organism=Citrus clementina; type=EST; length=1113bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCC
AAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGA
GAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTC
CGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATAC
CTGTTGTAATATGATTTTTGGAAAACCCTTCCAAACCCACAACCACAGAA
TGCACCCAAGCCCTGTGCTACCATGTACAAAAAAGCTCGAATAAGCGACA
CTTTGCCCCCCCAGACCAATCCAAATGTCCAACCCGGGTTGAAATGTCCC
CCAAAAAACCCGGCTGGGCCAAAAACCAAAAAGAAAATCATGCCACCCAA
GGGCCCCAACCAATGCCCAAAAAAGGCCACACCCCCCCCCCCCGGATTAG
GATATTTCAATTTGGGAAATAATCTGGGCCTCTTTTATACCCCACCCCCA
GTCACAAAAAGGG
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