DY305230

Overview
NameDY305230
Unique NameDY305230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 5.471e-81
Identity = 155/212 (73.11%), Postives = 165/212 (77.83%), Query Frame = -3
Query:  404 GGVAFFG-HWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 1036
            GGV   G  W    GGMIF LV+  AG  GGH NP  T GL    KVSL+RA LYM AQ LGA CG    + FQ S Y+RYGGGANELA GY+ GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G AV+YN  KAW DQWIFWVGPFIGA +AA YHQ ILRA+A +  GSFRSNA
Sbjct:   78 GGVGVLGIAWA--FGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRASA-RGYGSFRSNA 286          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 5.471e-81
Identity = 150/196 (76.53%), Postives = 163/196 (83.16%), Query Frame = -3
Query:  410 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 997
            GGMIF LV+  AG  GGH NP  TFGL    KVSL+RA LY+VAQ LGA CG G  + FQ ++Y RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN+ KAW D WIFWVGP IGA +AA YHQY+LRA+A K LGS  S
Sbjct:   93 GGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSSSS 287          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.885e-73
Identity = 134/190 (70.53%), Postives = 150/190 (78.95%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  YM+ Q LGA CG G  + FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:   96 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.885e-73
Identity = 135/190 (71.05%), Postives = 150/190 (78.95%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  Y+V Q LGA CG G  + FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:   95 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 2.462e-73
Identity = 134/190 (70.53%), Postives = 149/190 (78.42%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  Y+V Q LGA CG G  + FQ   Y   GGGAN +A GY KG+GLGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:   96 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 275.018 bits (702), Expect = 5.484e-73
Identity = 133/190 (70.00%), Postives = 148/190 (77.89%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  YMV Q LGA CG G  + FQK  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN+  AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:   97 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKS 286          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 4.642e-72
Identity = 131/190 (68.95%), Postives = 149/190 (78.42%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  Y+V Q LGA CG G  + FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ AW+D WIFWVGPF+GA +AA YHQ I+RA   K+
Sbjct:   98 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 6.063e-72
Identity = 131/190 (68.95%), Postives = 148/190 (77.89%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  Y+V Q LGA CG G  + FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK+ AWDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:   95 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKS 284          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 6.063e-72
Identity = 131/190 (68.95%), Postives = 148/190 (77.89%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  Y+V Q LGA CG G  + FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:   95 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 6.063e-72
Identity = 131/190 (68.95%), Postives = 148/190 (77.89%), Query Frame = -3
Query:  428 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 997
            GGMIF LV+  AG  GGH NP  TFGL    K+SL RA  Y+V Q LGA CG G  + FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:   95 GGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
The following BLAST results are available for this feature:
BLAST of DY305230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
PIP24_ORYSJ5.471e-8173.11Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ5.471e-8176.53Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP14_ARATH1.885e-7370.53Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH1.885e-7371.05Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP15_ARATH2.462e-7370.53Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP12_ORYSJ5.484e-7370.00Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP11_ORYSJ4.642e-7268.95Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ARATH6.063e-7268.95Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA6.063e-7268.95Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH6.063e-7268.95Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305230 ID=DY305230; Name=DY305230; organism=Citrus clementina; type=EST; length=1113bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCC
AAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGA
GAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTC
CGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATAC
CTGTTGTAATATGATTTTTGGAAAACCCTTCCAAACCCACAACCACAGAA
TGCACCCAAGCCCTGTGCTACCATGTACAAAAAAGCTCGAATAAGCGACA
CTTTGCCCCCCCAGACCAATCCAAATGTCCAACCCGGGTTGAAATGTCCC
CCAAAAAACCCGGCTGGGCCAAAAACCAAAAAGAAAATCATGCCACCCAA
GGGCCCCAACCAATGCCCAAAAAAGGCCACACCCCCCCCCCCCGGATTAG
GATATTTCAATTTGGGAAATAATCTGGGCCTCTTTTATACCCCACCCCCA
GTCACAAAAAGGG
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