DY305230

Overview
NameDY305230
Unique NameDY305230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1113
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.159e-22
Identity = 70/177 (39.55%), Postives = 97/177 (54.80%), Query Frame = -3
Query:  425 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKAL 952
            GGH NP  TFG + GG+VSL+RA LY VAQ LGA       R+       R  G A  LA G      +  E + TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++  +   W   W++W+GPF+GA +A   ++Y++  +A  A+
Sbjct:   85 GGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM--RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLVIPSADAAV 250          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.159e-22
Identity = 64/180 (35.56%), Postives = 94/180 (52.22%), Query Frame = -3
Query:  452 IFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 988
            +F  V   A   GGH NP  TFG   GG ++L+R  +Y++AQ LG+            S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA SFG AV+     +W + W++W GP IG  +A   ++ +
Sbjct:   69 LFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 4.406e-22
Identity = 73/203 (35.96%), Postives = 101/203 (49.75%), Query Frame = -3
Query:  452 PGGGGVAFFGHWLGPLGGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTG----LGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 1045
            P G   A   H  G     +F  V   A   GGH NP  TFG++ GG ++L+R  LY +AQ LG+   C     F  S+     GG    A G + G G    L  EI+ TF LVYTV+ +A DPK  +    +  +AP+ IGF V    LA    +G  +NPA +FG AV+      W + W++W GP IG  +A   + ++
Sbjct:   56 PSGLVAAALAHAFG-----LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC-----FLLSFAT---GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.515e-22
Identity = 67/177 (37.85%), Postives = 92/177 (51.98%), Query Frame = -3
Query:  461 IFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 988
            +F  V   A   GGH NP  T GL  GG ++++    Y +AQ LG+   C    +  K   N      + +A G +   G+  EII TF LVYTV+ +A DPK+ +    + V+AP+ IGF V    LA  P +G  +NPARSFG AV       +   WI+W GP IG  +A F +
Sbjct:   67 LFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVAC----LLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIY 232          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.674e-21
Identity = 66/177 (37.29%), Postives = 90/177 (50.85%), Query Frame = -3
Query:  461 IFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 988
            +F  V   A   GGH NP  TFGL  GG ++++   LY VAQ LGA   C     F   Y             G ++  G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV       +   W++WVGP +G  +A   +
Sbjct:   67 LFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVAC-----FLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.187e-21
Identity = 67/173 (38.73%), Postives = 93/173 (53.76%), Query Frame = -3
Query:  437 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAA 952
            GGH NP  TFG + GG++SLIRA  Y +AQ LGA       R+       R  G A  LA G      +  E   TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++  +   W   W++W+GPF+GA +A   ++Y++  +A
Sbjct:   86 GGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGM--RPPGFA--LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLVIPSA 247          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.730e-21
Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = -3
Query:  461 AGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 964
            A   GGH NP  T GL  GG +++I  F Y +AQ LG+   C    +      N      + +A G     G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+      +   WI+WVGP +G  +A   +
Sbjct:   75 ANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC----LLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.730e-21
Identity = 71/183 (38.80%), Postives = 94/183 (51.37%), Query Frame = -3
Query:  461 GGMIFFLVFGPAGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 997
            G  +F  V   A   GGH NP  TFGL  GG++++I    Y +AQ LG+   C     F   Y    GG A   + +A G     G+  EII TF LVYTV+ +A DPK+ +    +  +APL IG  V    LA  P +G  +NPARSFG AV       +   W++WVGP IG  +A   +
Sbjct:   64 GFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAAC-----FLLKYVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.730e-21
Identity = 60/170 (35.29%), Postives = 88/170 (51.76%), Query Frame = -3
Query:  443 GGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 952
            G H NP  T GL+  G +S+++A  Y++ Q +GA  G    +V   + + R       LA G     G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARSFG AV  N +  W + W++W GP +G  VA   ++ + RA
Sbjct:   81 GCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of DY305230 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.362e-21
Identity = 63/169 (37.28%), Postives = 87/169 (51.48%), Query Frame = -3
Query:  461 AGFFGGHFNPGWTFGLVWGGKVSLIRAFLYMVAQGLGAFCGCGFGRVFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 964
            A   GGH NP  T GL  GG ++LI  F Y +AQ LG+   C    +      N      + ++ G     G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSFG AV+          WI+WVGP +G  +A   +
Sbjct:   75 ANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC----LLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
The following BLAST results are available for this feature:
BLAST of DY305230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
TIP31_MAIZE1.159e-2239.55Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP1_MEDTR1.159e-2235.56Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_ARATH4.406e-2235.96Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP_ANTMA7.515e-2237.85Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP23_MAIZE1.674e-2137.29Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP31_ORYSJ2.187e-2138.73Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP22_ARATH3.730e-2137.28Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP21_ARATH3.730e-2138.80Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP_CICVR3.730e-2135.29Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP23_ARATH6.362e-2137.28Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305230 ID=DY305230; Name=DY305230; organism=Citrus clementina; type=EST; length=1113bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGA
TGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCC
AAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGA
GAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTC
CGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATAC
CTGTTGTAATATGATTTTTGGAAAACCCTTCCAAACCCACAACCACAGAA
TGCACCCAAGCCCTGTGCTACCATGTACAAAAAAGCTCGAATAAGCGACA
CTTTGCCCCCCCAGACCAATCCAAATGTCCAACCCGGGTTGAAATGTCCC
CCAAAAAACCCGGCTGGGCCAAAAACCAAAAAGAAAATCATGCCACCCAA
GGGCCCCAACCAATGCCCAAAAAAGGCCACACCCCCCCCCCCCGGATTAG
GATATTTCAATTTGGGAAATAATCTGGGCCTCTTTTATACCCCACCCCCA
GTCACAAAAAGGG
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