DY305236

Overview
NameDY305236
Unique NameDY305236
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1328
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: MPG1_SULAC (Putative mannose-1-phosphate guanyltransferase OS=Sulfolobus acidocaldarius GN=mpg1 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.569e-24
Identity = 70/239 (29.29%), Postives = 132/239 (55.23%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDPF*LRPTSIEKEVFPKIALKGKLFAMVLPSFLGWTLHSPRIYLYVLKLHLGSLK 868
            + A++L GG+ TRLRPL+L+ PK L+    KP++ + + +L +  V  + L++    + +L+ +K+    L   I+   E   LG AGPL     K   +  +   V+  D+ +E  F +++E+H++ G  A++  T+V++PS+YGV++T+    ++ + +EKPK  + N +NAGIY+    +L+   +   SI ++  PK+ +     ++     L   +  PR Y+ +  L L +LK
Sbjct:    2 VSAIVLAGGYATRLRPLSLTKPKALLPVLGKPLMDYTLYSLASSDVDTIYLSLRVMADKVLDHVKQL--NLQKNIVSVIEESRLGDAGPLKFINSKY--NLSDDVIVVYGDIYAEIDFNKLLEYHQSKGCNATLTATQVEDPSRYGVLITDGH--RLIQIIEKPKTPLSNLVNAGIYVFKKELLNK--IDGLSISRDFLPKLLVSDTCVSVYPYKGLWMDIGVPRDYMRI-NLELLTLK 231          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: YBB2_SCHPO (Probable mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=SPBC13G1.02 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.469e-22
Identity = 66/190 (34.74%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  158 ALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEAKLGI--KIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD 706
            A+ILVGG   GTR RPL+  VPKPL +   + MI H + AL  +  V +V L   Y   V  +F+ E  +      +I   +E   LGT G L   RD+++       FV+++DV   +P  E++  H       ++M TKV  ++ S +G +V E STG+V  +V+KP  ++ N I+ GIY+ + ++ D
Sbjct:    5 AVILVGGPSRGTRFRPLSFDVPKPLFKIGGREMIYHHLAALSKIESVKDVFLVGFYDESVFKDFINEVASHFPSFNRIKYLREYNCLGTGGGLYHFRDQILKGHTSNVFVMHADVCCSFPLQELLNVHHEKKALVTLMATKVSKEDASNFGCLVEEPSTGRVLHYVDKPSSYLSNIISCGIYIFDASIFD 194          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: RFBF_SALTI (Glucose-1-phosphate cytidylyltransferase OS=Salmonella typhi GN=rfbF PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.853e-19
Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQET---------EPLG-----------TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDPF*LRPTSIEKEVFPKIALKGKLFAMVLPSF 799
            MKA+IL GG GTRL   T+  PKP+VE   KP++ H ++     G+ + ++   Y+  V+  +   +   +        E          EP             T G L    + + DD  E F     D +++      I+FHKAHG +A++  T    P ++G +  +   G+V  F EKPK   G  IN G ++LNP+V+D      T+ E+E    +A +G+L A   P F
Sbjct:    1 MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATF--PPGRFGAL--DIQAGQVRSFQEKPK-GDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGF 229          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: RFBF_SALTY (Glucose-1-phosphate cytidylyltransferase OS=Salmonella typhimurium GN=rfbF PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.287e-18
Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQET---------EPLG-----------TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDPF*LRPTSIEKEVFPKIALKGKLFAMVLPSF 799
            MKA+IL GG GTRL   T+  PKP+VE   KP++ H ++     G+ + ++   Y+  V+  +   +   +        E          EP             T G L    + + DD  E F     D +++      I+FHKAHG +A++  T    P ++G +  +   G+V  F EKPK   G  IN G ++LNP+V+D      T+ E+E    +A +G+L A   P F
Sbjct:    1 MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATF--PPGRFGAL--DIRAGQVRSFQEKPK-GDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGF 229          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: STRD_STRGR (Glucose-1-phosphate thymidylyltransferase OS=Streptomyces griseus GN=strD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.386e-18
Identity = 58/183 (31.69%), Postives = 102/183 (55.74%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAV 700
            MKAL+L GG GTRLRP+T +  K LV  ANKP++ + +EA++A G+ +V + +    + ++  + +  ++ G+K+    +++PLG A  + ++RD L +D    F +   D        + +   +A   +A +M+T+V EP  +GV    +S G+V    EKP     +    G+YL +PA+
Sbjct:    1 MKALVLAGGTGTRLRPITHTSAKQLVPVANKPVLFYGLEAIRAAGIIDVGIVVGDTADEIVAAVGD-GSRFGLKVSYIPQSKPLGLAHCVLISRDFLGED---DFIMYLGDNFVVGVVEDSVREFRAARPDAHLMLTRVPEPRSFGVAELSDS-GQVLGLEEKPAHPKSDLALVGVYLFSPAI 178          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: GLMU_METM5 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0513 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.170e-17
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAV 700
            M A+IL  G GTRL P+T S PKP++  A KP++ H IE ++   V ++ L + ++ E ++ +  E       KI    + + LGT   +  A++ + DD    F VLN DVI E    E++++      E ++ ++KVD P  +GV+       KV   +EKPK      N INAGIY L  +V
Sbjct:    1 MDAIILCAGKGTRLHPITESRPKPMIPIAGKPILEHIIEKIEN-HVEKIYLVVGFEKEKIIEYFNE-----NPKIEYILQEKQLGTGHAVLTAKNFIKDD----FLVLNGDVIFEDSIDEILDY------ENAVALSKVDNPENFGVIELGYD-NKVINLLEKPKKEELTSNFINAGIYKLQNSV 168          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: GLMU_METMP (Bifunctional protein glmU OS=Methanococcus maripaludis GN=MMP1076 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 7.061e-17
Identity = 64/185 (34.59%), Postives = 97/185 (52.43%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAV 700
            M A+IL  G GTRL P+T S PKP++  A KP+I H IE ++   V ++ L + YQ E ++++ K+       KI    + + LGT   +  A++ +  D    F VLN DVI E    E++ +      E ++ ++ VD P  +GV+       K+   +EKPK      N INAGIY L  +V
Sbjct:    1 MDAIILCAGKGTRLHPITESRPKPMIPIAGKPIIEHIIEKIEN-HVEKIYLIVGYQKEKIIDYFKD-----NPKIEYILQEKQLGTGHAVLTAKNFIKGD----FLVLNGDVIFEDSIDEILNY------ENAVSLSNVDNPENFGVIELGYD-NKIINLLEKPKKEEITSNLINAGIYKLQNSV 168          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: GLMU_METJA (Bifunctional protein glmU OS=Methanocaldococcus jannaschii GN=glmU PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.204e-16
Identity = 60/185 (32.43%), Postives = 97/185 (52.43%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLD 706
            M A+IL  G G RLRPLT + PKP++  A KP++ H IE ++ + V  + L + Y+ E ++++ K        KI   ++ E  GT   +  A+D + D+    F V+N D+I E    E +++  A      + V +V  P  +GVVV ++    +E   EKP+    N INAGIY  +  + +
Sbjct:    1 MDAIILCAGKGERLRPLTENRPKPMIPIAGKPILQHIIEKVEDL-VDNIYLIVKYKKEKIVDYFKNHP-----KIKFLEQGEIDGTGQAVLTAKDYVDDE----FLVINGDIIFEDDLEEFLKYKYA------VAVKEVKNPENFGVVVLDDENNIIE-LQEKPENPKSNLINAGIYKFDKKIFE 168          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: GLMU_METM7 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0329 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.573e-16
Identity = 64/187 (34.22%), Postives = 97/187 (51.87%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAVLD 706
            M A+IL  G GTRL P+T S PKP++  A KP++ H IE ++   V ++ L + ++ E ++ + KE       KI    + + LGT   +  A++ + DD    F VLN D+I E    E++ +      E ++ ++KV  P  +GVV       K+   +EKPK      N INAGIY L   V D
Sbjct:    1 MDAIILCAGKGTRLYPITESRPKPMIPIAGKPILEHIIEKIENY-VEKIYLVVGFEKEKIIEYFKE-----NPKIEYILQEKQLGTGHAVLTAKNFIKDD----FLVLNGDIIFEDSIDEILVY------ENAVALSKVGHPENFGVVELGYD-NKIINLLEKPKKEELPSNLINAGIYKLQNNVFD 170          
BLAST of DY305236 vs. ExPASy Swiss-Prot
Match: GLMU_METVS (Bifunctional protein glmU OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0399 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.332e-15
Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  152 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP------KLFVGNKINAGIYLLNPAVLD 706
            M A+IL  G GTRL P+T + PKP++  A KP++ H IE ++   V ++ L + ++ E ++++    E     KI    + + LGT   + +A++ +  D    F VLN DVI E    E + +  A G      ++KVD P  +GV+       KV   +EKP        F  N INAGIY L   V +
Sbjct:    1 MDAVILCAGSGTRLYPITENRPKPMIPIAGKPILEHIIEKIEN-HVEKIYLVVGFEKEKIIDYFYGNE-----KIEFIVQEKQLGTGHAVLMAKNYIKGD----FLVLNGDVIFESDILEFLNYENAVG------LSKVDNPENFGVIELGYD-NKVINLLEKPNEDEIKSKFTSNLINAGIYKLENFVFE 174          
The following BLAST results are available for this feature:
BLAST of DY305236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MPG1_SULAC1.569e-2429.29Putative mannose-1-phosphate guanyltransferase OS=... [more]
YBB2_SCHPO1.469e-2234.74Probable mannose-1-phosphate guanyltransferase OS=... [more]
RFBF_SALTI9.853e-1929.66Glucose-1-phosphate cytidylyltransferase OS=Salmon... [more]
RFBF_SALTY1.287e-1829.66Glucose-1-phosphate cytidylyltransferase OS=Salmon... [more]
STRD_STRGR6.386e-1831.69Glucose-1-phosphate thymidylyltransferase OS=Strep... [more]
GLMU_METM53.170e-1734.59Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METMP7.061e-1734.59Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METJA1.204e-1632.43Bifunctional protein glmU OS=Methanocaldococcus ja... [more]
GLMU_METM71.573e-1634.22Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METVS1.332e-1532.98Bifunctional protein glmU OS=Methanococcus vanniel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AC01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305236 ID=DY305236; Name=DY305236; organism=Citrus clementina; type=EST; length=1328bp
GGCAAAGCAAAAGCGAAGCGCGCGAAGCTCGCCTCATCCGTTGACTGAGC
TGTCGGTCCCGAGTCACGACTCGCGACTCTTGTTTTTGAACTCAGTTGTT
TGCCGTTCGGATCCGGTCTTAATTAAAGGATAAAGCAGGCTCCGTATCAC
AATGAAGGCACTTATTCTTGTTGGAGGGTTCGGAACACGGTTGAGGCCGT
TGACGCTTAGTGTCCCTAAGCCACTTGTTGAATTTGCTAACAAACCCATG
ATCCTGCATCAGATAGAGGCCCTTAAGGCAGTTGGAGTGACTGAAGTAGT
TTTGGCTATTAACTACCAGCCAGAGGTGATGTTGAACTTTTTGAAGGAAT
TTGAAGCAAAGCTTGGGATCAAGATCATCTGCTCACAAGAGACTGAGCCA
CTGGGCACTGCTGGTCCTCTGGCTCTGGCTAGAGACAAATTGATTGACGA
TACTGGTGAGCCATTTTTCGTCCTTAACAGTGATGTTATTAGTGAGTACC
CATTTGCAGAAATGATTGAATTCCACAAAGCACATGGAGGAGAGGCCTCC
ATCATGGTAACCAAGGTGGATGAGCCATCAAAATATGGTGTGGTGGTTAC
GGAAGAGTCTACTGGAAAAGTTGAGAAATTCGTTGAGAAACCTAAATTAT
TTGTTGGTAACAAAATTAATGCTGGAATTTATCTTTTGAACCCTGCGGTT
CTTGATCCCTTTTAGCTGAGGCCCACCTCCATTGAGAAAGAGGTCTTTCC
CAAAATTGCTTTAAAAGGAAAGCTCTTCGCGATGGTTCTTCCCAGTTTTC
TGGGATGGACATTGCACAGTCCAAGGATTTACTTATATGTGTTGAAACTC
CATTTGGGATCCCTGAAAAAAAAAGTCCCCCCCTAGAGTTTGGTCATGTG
AGCGCAAGTTGCTCGCGCTTCTGCTCTTCGGCTGGCTAGTTTGTCCCTTT
ATCGATATAGTATTTGTTGTTTACTTTTCTTGCGTGTCTCTGGGGGCATG
GTGTTTAGATTAAGGACGTCGCTAGCACCGTCTGTACTGTCGGGAGTGTC
TGAAGGTGCGTGTAAGCATGTGTCAAATATATATATTATTAGATTTTATA
GAGCTTGGATCGGTCTTCTACCGTGTTAATAAACCAGATTAAGTTATGGT
TACTTATAACCGAGTAATGTGAAATGACTACGCCTACACGCGCGAGAGAT
AACTGCGATCAGATTAGATACTCGTCAGGAGTCGTGTGGTTTCGACTCGA
AAGAAACTACTGTCATTCACACGCTACTAAACANGGATCGAAGCCCGCTC
AGAACTTAACAGATGTCCGTTGGACCTA
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