DY305262

Overview
NameDY305262
Unique NameDY305262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1258
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.899e-32
Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIE--LRPTSLEKEVFSKLL*KESSSRW 784
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP E + +FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV SE+P   M++FHK HGG  S ++        +   YG +V+   T +V  +VEKP  FV + IN GIYL +P++   I    +   LE ++FS +   E +S W
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVPMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVSNGDTQEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHIAEVFQRNQLELQLFSCI--SEENSSW 220          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 7.216e-32
Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  149 TMKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE--PSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI 712
            T KA+ILVGG   GTR RPL+L VPK L   A KPMI H IEA   V  + E++L   +Q  V+  F+ E   +L + I    E + LGTAG L   RD +++      FVL+SD+   +P  ++++FHK HG   +IM T+++    ++YG +V +E T ++  + EKP+ FV N IN G+Y  +P   D I
Sbjct:    5 TTKAIILVGGPSKGTRFRPLSLDVPKLLFPIAGKPMIYHHIEACSKVENMKEIILIGFFQESVLSKFISETSKQLNVAIRYINEEKVLGTAGGLYHFRDIILEGGPSEIFVLHSDICCAFPLNDLLQFHKQHGRSCTIMGTEIESAYANQYGCLVRDEKTAELLHYAEKPETFVSNLINCGVYCFSPQFFDVI 197          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 7.216e-32
Identity = 93/264 (35.23%), Postives = 135/264 (51.14%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI--------------------ELRPTSLEKEVFSKLL*KESSSRWFFQVSG-WT-LESQGITFTGLRLYL 853
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP   LN FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV SE+P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP  FV + IN GIYL +P++   I                     +    LE++VFS L  +     + ++  G W+ ++S G      RLYL
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALNSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVSMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVANRDTQEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHIAEVFQQNQQELQLEENSSWQRMEVIRLEQDVFSTLAGR--GKLYVYKTEGCWSQIKSAGSAIYASRLYL 263          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.777e-30
Identity = 77/195 (39.49%), Postives = 111/195 (56.92%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI 712
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP E + +FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV S +P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP  FV + IN GIYL +P++   I
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSAFPLVPMLDFHKQHGGSQSYVILGTTANRSQSLNYGCIVANGETQEVLHYVEKPGTFVSDIINCGIYLFSPSIFQHI 196          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.777e-30
Identity = 99/280 (35.36%), Postives = 138/280 (49.29%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEAL-KAVGVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSK----YGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSLEKEVFSKLL*KESSSRW------------FFQVSG------------WT-LESQGITFTGLRLYLDSLKKNPSLNLAT 892
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  K   + E++L   YQP   LN FL   +    I I   QE   LGT G +   RD+++    + FFV+N+DV SE+P  EM++F K HG   S ++       K    YG +V  E T +V  +VEKP  FV + IN GIYL  P +   I     S+ ++   ++L +E S+ W            F  ++G            W+ ++S G      RLYL+   K     LAT
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACSKLPNMKEILLIGFYQPNEELNRFLSCAQQDFKISIRYLQEYAALGTGGGIYHFRDQILSGGPDAFFVMNADVCSEFPLPEMLDFQKEHGDTYSFVILGTTANRKQSLNYGCIVENEQTDEVLHYVEKPGTFVSDIINCGIYLFTPEIFQHI----GSVFQKNQQEMLLEEQSNGWHRAEVIRLEQDIFTALAGQGKLYVYKTDRFWSQIKSAGSAIYASRLYLNQYHKTHPERLAT 277          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.352e-29
Identity = 77/190 (40.53%), Postives = 109/190 (57.37%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL 703
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++    E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP  F+ + IN GIYL +P  L
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEAL 191          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.378e-29
Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL 703
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++  + E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP  F+ + IN GIYL +P  L
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEAL 191          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.378e-29
Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL 703
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++  + E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP  F+ + IN GIYL +P  L
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEAL 191          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 7.467e-29
Identity = 76/190 (40.00%), Postives = 109/190 (57.37%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVL 703
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA   V G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++    E FFVLN+DV S++P + M++ H+       ++ T  +  +   YG +V    T +V  +VEKP  F+ + IN GIYL +P  L
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFTPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLDAHRLQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKPSTFISDIINCGIYLFSPEAL 191          
BLAST of DY305262 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.837e-28
Identity = 78/195 (40.00%), Postives = 105/195 (53.85%), Query Frame = 2
Query:  152 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAV-GVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHG----GEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI 712
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA   V  + E++L   YQP   LN F+   + +  I I   QE   LGT G +   RD+++      FF++N+DV SE+P  EM++FH+ HG    G          +   YG +V    T +V  FVEKP  FV + IN GIYL  P +   I
Sbjct:    2 LKAIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACAQVPDMKEIMLIGFYQPNDELNRFIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFPLLEMLQFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHETNEVLHFVEKPSTFVSDIINCGIYLFTPDIFAHI 196          
The following BLAST results are available for this feature:
BLAST of DY305262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
GMPAB_XENLA1.899e-3238.46Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
GMPPA_DICDI7.216e-3240.41Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
GMPAA_XENLA7.216e-3235.23Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]
GMPPA_XENTR1.777e-3039.49Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAA_DANRE1.777e-3035.36Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_MOUSE3.352e-2940.53Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_PAPAN4.378e-2940.53Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_HUMAN4.378e-2940.53Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPPA_RAT7.467e-2940.00Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPAB_DANRE2.837e-2840.00Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AF03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305262 ID=DY305262; Name=DY305262; organism=Citrus clementina; type=EST; length=1258bp
GGCAAAGCAAAAGCGAAGCGCGCGAAGCTCGCCTCATCCGTTGACTGAGC
TGTCGGTCCCGAGTCACGACTCGCGACTCTTGTTTTTGAACTCAGTTGTT
TGCCGTTCGGATCCGGTCTTAATTAAAGGATAAAGCAGGCTCCGTATCAC
AATGAAGGCACTTATTCTTGTTGGAGGGTTCGGAACACGGTTGAGGCCGT
TGACGCTTAGTGTCCCTAAGCCACTTGTTGAATTTGCTAACAAACCCATG
ATCCTGCATCAGATAGAGGCCCTTAAGGCAGTTGGAGTGACTGAAGTAGT
TTTGGCTATTAACTACCAGCCAGAGGTGATGTTGAACTTTTTGAAGGAAT
TTGAAGCAAAGCTTGGGATCAAGATCATCTGCTCACAAGAGACTGAGCCA
CTGGGCACTGCTGGTCCTCTGGCTCTGGCTAGAGACAAATTGATTGACGA
TACTGGTGAGCCATTTTTCGTCCTTAACAGTGATGTTATTAGTGAGTACC
CATTTGCAGAAATGATTGAATTCCACAAAGCACATGGAGGAGAGGCCTCC
ATCATGGTAACCAAGGTGGATGAGCCATCAAAATATGGTGTGGTGGTTAC
GGAAGAGTCTACTGGAAAAGTTGAGAAATTCGTTGAGAAACCTAAATTAT
TTGTTGGTAACAAAATTAATGCTGGAATTTATCTTTTGAACCCTGCGGTT
CTTGATCGCATTGAGCTGAGGCCCACCTCCCTTGAGAAAGAGGTCTTTTC
CAAATTGCTTTAAAAGGAAAGCTCTTCGCGATGGTTCTTCCAGGTTTCTG
GATGGACTTTGGAAAGCCAAGGGATTACTTTTACGGGCTTGAGACTCTAT
CTGGACTCCCTGAAGAAGAATCCCTCTTTGAATTTGGCCACTGTTGCTAA
CATGTAAGGCATGGCTTGGTGCAGAAAATGGCTCCATTGGGGAAGGGAAG
GTTGAATTGAACCCCATTGTTGCCGTGGGGCCCGGGTTGGGTTTGTTGAA
GCAGGGAGATAACACCCTTCCCCCTGTCACAGGGGTGCCTGGGTGAGTGG
CACACAAAAAAAACTTACGGGCCCATACCCACGATCTACTATGAGTAAGA
GGGCTCCTCCCTTGGTTTGGGCGAAGGGGGAGCCTCGGATTTGAGAAAAA
GTTAGGTCACGTTTTCTCGGCGTGGGGAGAAAAGATATTTTTGATTGTCG
ATGGGGACAAGCGGCGTGTGAATAGAATACGCCGTTCCAGGTCGTGGCGG
GAGTGACT
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