DY305268

Overview
NameDY305268
Unique NameDY305268
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_BORBR (Glycogen synthase OS=Bordetella bronchiseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 44/122 (36.07%), Postives = 60/122 (49.18%), Query Frame = 1
Query:    4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-------VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 348
            R+   AD +L  SRFEP GL  L+AMRYGT+P+ +  GG+VDT       +EE   G   G      +  +P D+    T   RALA    +    M +N M  D SW+  A+ +     NL
Sbjct:  373 RLHAGADLLLHGSRFEPFGLTPLYAMRYGTLPVASRVGGMVDTIRDPGPAIEESCAGQGTGFL---FDGSEPADMRQAVTRALRALAKPAVR--DAMRRNAMQADFSWRTSAQAYAGLYANL 489          
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 1
Query:   19 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 348
            +D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TVRRA+  Y  + + E ++K  M +D SW   A  +++   +L
Sbjct:  368 SDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFYHDKPVWEQLVKQAMTEDYSWGKSALAYKKLYKSL 474          
The following BLAST results are available for this feature:
BLAST of DY305268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GLGA_BORBR8.094e-1136.07Glycogen synthase OS=Bordetella bronchiseptica GN=... [more]
GLGA_BACC18.094e-1139.82Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AG02RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305268 ID=DY305268; Name=DY305268; organism=Citrus clementina; type=EST; length=685bp
TGCCGAATTCGGCACGAGGCTGATTTTATTTTGATTCCAAGCAGATTTGA
ACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTA
TCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACA
GGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGT
AGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATG
GTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTT
TCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGA
AGTTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTG
CCAAGGAAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTT
TTATTTTGGACCGCAAACATGTTCCTGTAATTCTCCACAACCCAAGATAT
TACTTAGGAAATAACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTC
AATAATGGTTTGGAGTTGAGACATTAGTGTTTACCTTGTATAATGAAATA
TTAAGTTCTGTTTTACAGTTTTGTAAAAGGGCTCTGAGGGCTGTCGCCAC
TCTCCTGAAATGAAAAAGTTCAACTGAACAATAAA
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