DY305268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.972e-13 Identity = 47/109 (43.12%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 327 RI AD +PSRFEPCGL Q+ A+RYGT+PIV TGGLVDTV G GF+ + + A++T R A T MK GM D SW+G A+ + Sbjct: 339 RIYAGADAFAMPSRFEPCGLSQMIALRYGTLPIVRETGGLVDTV-PGDVGFRFADATTE----------ALATACRDARTTLEDVVEWQSRMKRGMELDFSWEGSARHY 436
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 47/127 (37.01%), Postives = 63/127 (49.61%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE--------------MMKNGMAQDLSWKGPAKKWEETLL 342 RI AD +L+PSRFEPCGL QL+AM+YGT+P+V + GGL DTV + DP + + + T RA A+ AL + M QDLSW A+ +EE L+ Sbjct: 651 RITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTV----------------QPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLI 761
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_SHIFL (Glycogen synthase OS=Shigella flexneri GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 351 RI AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_SHIF8 (Glycogen synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 351 RI AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_SHIDS (Glycogen synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 351 RI AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_SHIBS (Glycogen synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 351 RI AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRASLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_SHIB3 (Glycogen synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 47/122 (38.52%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 351 RI AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 348 +I+ AD +L+PSRFEPCGL QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 365 QIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD--PVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 348 +I+ AD +L+PSRFEPCGL QL A+RYG VP+VA GGL DTV + +M + + V PV A+ + A + A + NGM D+SWK PA+ + + +L Sbjct: 365 QIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD---ANEMATATGVATGVQFAPVTTDALIKAFGKTRALFADVVAWRNLQINGMTTDVSWKNPAQHYAKLYRDL 479
BLAST of DY305268 vs. ExPASy Swiss-Prot
Match: GLGA_RHOCS (Glycogen synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glgA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 4 RIRHEADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 333 RI+ AD +L+PSRFEPCGL Q++A+RYG +P+V+ GGL DTV + T + S +PV + + + RA A + L + +N M +D+ W A+ + + Sbjct: 382 RIQAGADVLLVPSRFEPCGLTQMYALRYGALPLVSRVGGLADTVTD-VTESSLADGSATGFVFEPVGLMPLIHAMERAAALWRRPDLWRTVQRNAMGRDVGWAASARHYAD 491 The following BLAST results are available for this feature:
BLAST of DY305268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 252
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305268 ID=DY305268; Name=DY305268; organism=Citrus clementina; type=EST; length=685bpback to top |