DY305339

Overview
NameDY305339
Unique NameDY305339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1271
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1
Query:  358 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF CT +TEWL+GKH VF +V + + + +A  + G
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFG 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.518e-45
Identity = 90/132 (68.18%), Postives = 101/132 (76.52%), Query Frame = 1
Query:  421 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRG 816
            MELF DV P+TAENFRALCTGEKG+G   KPLHYKGSSFHRVIPGFMCQ            ESIYG+KF DENF+KKHTGPG+LSMANAGPGTNGS FF CT +T WL+GKH VF QV + + + +A  K G
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVG 131          
The following BLAST results are available for this feature:
BLAST of DY305339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PPIA_PANTR1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE1.518e-4559.48Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
CYPH_ALLCE1.518e-4568.18Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CA03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305339 ID=DY305339; Name=DY305339; organism=Citrus clementina; type=EST; length=1271bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAAAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCATTTCTTCCGCTGTACGGGCCAGACCGAATGGCTCAATGGG
AAGCACTTTGTGTTCTGTCAAGTCTTCCAATGGATTGGACTCCACAAGGC
CTTCTAAAAGCGGGGTCCTATTTCCGAAAGGAACTAAATCCCCTCCATGA
ACCGGTGATATGCGAGAAATTGTCTTAAAATTAATGTTGATAAGGATAAC
CCTCAAAAAGAACCTGTGAGACGCCGATCGGAATGGGCATTTTGGATTCA
CTTTATATTGTGGCCCACCCCTGCGGGAAACCTTATCCCCCTATAAGCAG
ATATCCCCAGCATAAAAACCCGTGACAGCCAGTAACAAGCTACCTCCCGA
TAGCTGGCACTTGCTTATAAAATACCTATAAAGACCACTTTATCACTACC
AGACCCATATTAACCCCATAGAGTTTTGACCCTATGACATACCAGAAAAA
CGTTAAAGATTGATAAAGACATTAAATTTTGTTAATGCAGAGCGGACGCT
TCACGTATCTGATAATACACTTAAAGCCTCCTATTCATTATAGGATTAAG
ATCCGTTACTAAATACAATAC
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