DY305339

Overview
NameDY305339
Unique NameDY305339
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1271
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.426e-37
Identity = 85/160 (53.12%), Postives = 97/160 (60.62%), Query Frame = 1
Query:  346 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRGPIS 825
            N +     KVFFD  V G   GRI  EL+ +V P+TAENFRALCTGEKG G       YKG  FHR+IP FM Q            +SIYGSKFADENFVKKH   G+LSMANAGP TNGS FF  T    WL+GKH VF +V + + + KA    G  S
Sbjct:   15 NSASRLGKKVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTAS 167          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.780e-37
Identity = 82/153 (53.59%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  352 SKMP---NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHK 798
            +K+P   NP VFFD+T+GG+P GRI  ELF DV P+TAENFR  CTGE      G+P  YKGS FHR+IP FMCQ              I+G K F DENF  KH  PG+LSMANAGP TNGS FF  T  T +L+ KH VF +VF+ + + K
Sbjct:    4 TKLPESGNPLVFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVK 155          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 5.780e-37
Identity = 79/142 (55.63%), Postives = 94/142 (66.20%), Query Frame = 1
Query:  373 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHK 798
            V+FD++  GQ  G+I  +L+ DV P+TAENFRALCTGEKG G       YKGS FHRVIP FM Q            +SIYG+KFADENFVK+H  PG+LSMANAGP TNGS FF  T    WL+GKH VF +V   + + K
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVK 138          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.549e-37
Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = 1
Query:  367 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            P+VFFD+ +G    GRIVMEL +D+ PRTAENFRALCTG++G G       Y    FHRVIP FMCQ            +SIYG KF DENF  +H G G+LSMAN+GP TNGS FF CT + +WL+GKH VF +V
Sbjct:   18 PRVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRV 146          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 9.860e-37
Identity = 80/141 (56.74%), Postives = 91/141 (64.54%), Query Frame = 1
Query:  376 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHK 798
            FFD+   GQP GRIV +LF DV P+TA NFRALCTGEKG G       Y GS+FHRVIP FM Q            +SIYG KF DENF  KH  PG+LSMANAGP TNGS FF  T  T WL+GKH VF +V + + + K
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVK 138          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 1.288e-36
Identity = 77/163 (47.24%), Postives = 101/163 (61.96%), Query Frame = 1
Query:  343 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQWIGLHKAF*KRGPISER 831
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG  FF    + +WL+GKH VF ++   + + +    + P+ +R
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIEFQAPLGKR 163          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.682e-36
Identity = 77/139 (55.40%), Postives = 93/139 (66.91%), Query Frame = 1
Query:  370 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGI--GKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            K +FD+++GG+PAGR+V E+++DVTP+TAENF  LC G+ G    K G PL Y+GS FHRVI GFMCQ            ESIYG KF DENF +KH  P +LSMANAGP TNGS  F     T  L+GKH VF +V Q
Sbjct:    6 KTYFDLSIGGKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQ 144          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.682e-36
Identity = 77/134 (57.46%), Postives = 91/134 (67.91%), Query Frame = 1
Query:  373 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            V+FD+++ G+PAGRI  +LF DV P+TA+NFRALCTGE+G G       YKGS FHRVIP FM Q            +SIYG KFADENF  KH+ PG+LSMANAGP TNGS FF  T    WL+G H VF +V
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKV 129          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.869e-36
Identity = 83/138 (60.14%), Postives = 90/138 (65.22%), Query Frame = 1
Query:  364 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQV 774
            NP VFFD+ +GG P GRI MELFADVTPRTAENFR  CTGE      GKP  YK S FHRVI  FM Q             +IYG+ KFADENFV KH   G+LSMAN+GP TNG  FF  T  T +LNGKH VF QV
Sbjct:   13 NPIVFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQV 149          
BLAST of DY305339 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.869e-36
Identity = 81/147 (55.10%), Postives = 98/147 (66.67%), Query Frame = 1
Query:  349 QSKMPNPKVFFDMTVG---GQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFFRCTGQTEWLNGKHFVFCQVFQ 780
            QSK+ + KV+FD++VG   G+ AGRIV+ L+ D  P+T ENFRALCTGEKG G       YKGS+FHRVI  FM Q            +S+YG  F DENF   H GPG+LSMANAGP TNGS FF CT +T WL+G+H VF QV +
Sbjct:   85 QSKITH-KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIE 223          
The following BLAST results are available for this feature:
BLAST of DY305339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
CYPC_YEAST4.426e-3753.13Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
PPIH_GIBZE5.780e-3753.59Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIA_CANAL5.780e-3755.63Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPIE_SCHJA7.549e-3755.88Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
CYPH_SCHPO9.860e-3756.74Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPIH_MOUSE1.288e-3647.24Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPID_ASHGO1.682e-3655.40Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPIA2_RHIOR1.682e-3657.46Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIH_ASPFU2.869e-3660.14Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
CP20B_ARATH2.869e-3655.10Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CA03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305339 ID=DY305339; Name=DY305339; organism=Citrus clementina; type=EST; length=1271bp
TGCCGAATTCGGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCAT
TAGCAACCACTTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGC
CCCACGTAGTCTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTT
ATTAGTTTCCACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACAT
CGTTGTTCCGGGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGG
ATGTCCATGCTAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCA
CGAGGATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCA
ATCAAAAATGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTC
AGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGA
ACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAA
GTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCC
CCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGA
GGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAAAA
GCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCA
ACGGATCTCATTTCTTCCGCTGTACGGGCCAGACCGAATGGCTCAATGGG
AAGCACTTTGTGTTCTGTCAAGTCTTCCAATGGATTGGACTCCACAAGGC
CTTCTAAAAGCGGGGTCCTATTTCCGAAAGGAACTAAATCCCCTCCATGA
ACCGGTGATATGCGAGAAATTGTCTTAAAATTAATGTTGATAAGGATAAC
CCTCAAAAAGAACCTGTGAGACGCCGATCGGAATGGGCATTTTGGATTCA
CTTTATATTGTGGCCCACCCCTGCGGGAAACCTTATCCCCCTATAAGCAG
ATATCCCCAGCATAAAAACCCGTGACAGCCAGTAACAAGCTACCTCCCGA
TAGCTGGCACTTGCTTATAAAATACCTATAAAGACCACTTTATCACTACC
AGACCCATATTAACCCCATAGAGTTTTGACCCTATGACATACCAGAAAAA
CGTTAAAGATTGATAAAGACATTAAATTTTGTTAATGCAGAGCGGACGCT
TCACGTATCTGATAATACACTTAAAGCCTCCTATTCATTATAGGATTAAG
ATCCGTTACTAAATACAATAC
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