DY305369

Overview
NameDY305369
Unique NameDY305369
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.385e-12
Identity = 54/162 (33.33%), Postives = 74/162 (45.68%), Query Frame = 2
Query:  389 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYG---MKEKLKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQI 862
            Q P     L +L +ATNNFS  N+         YK  L +G  +A+KRL+     E    F SE+  +  + HPN   LLGY + E    +V +   NG+L S L+        L W  R  I +G  +GL +LH GCQ             LL +DF  +I
Sbjct:  283 QKPIVKIKLGDLMAATNNFSSGNIDVSSRTGVSYKADLPDGSALAVKRLSACGFGE--KQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARI 442          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.385e-12
Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = 2
Query:  419 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD--FLSELGIMAHVDHPNTAKLLGY---GIEGGMHIVLELSPNGSL-------ASLLYGMKEKLKWGIRYKIALGVTEGLLYLHEGC 790
            ++  AT+N S E +IG GG  +VYK  L NG+ VA+K++     D+++++  F  E+  +  + H +  KL+GY     EG   ++ E   NGS+         +L   K+ L W  R +IA+G+ +G+ YLH  C
Sbjct:  943 DIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKIL--WKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDC 1076          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.115e-12
Identity = 49/169 (28.99%), Postives = 78/169 (46.15%), Query Frame = 2
Query:  389 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQIL*FWTNQLAT 892
            Q P     L +L  ATN F   N++        YK  L +G  + +KRL+    +     F SE+  +  + HPN   LLG+ + E  + +V +   NG+L S L   +  + W  R ++A+G   GL +LH GCQ             LL EDF  +++ +   +L +
Sbjct:  277 QKPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGSTLEVKRLS-SCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQL--QQWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVS 442          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.115e-12
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 2
Query:  392 SPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIK--RLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI----------EGGMHIVLELSPNGSLASLL--YGMKEKLKWGIRYKIALGVTEGLLYLHEG 787
            SP ++FSL EL+ ATNNF  ENL G+    ++YKG LR G  V ++  +L +  + + +A    ++ +++ + H +   +LG+ I             + IV E   NGSL   L  +  KE LKW  R  IA+GV  G+ +LH G
Sbjct:  430 SPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQKNSTQNLA---QQMEVLSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLTDWRKKEVLKWPQRMSIAIGVARGIQFLHTG 568          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 3.115e-12
Identity = 56/212 (26.42%), Postives = 101/212 (47.64%), Query Frame = 2
Query:  419 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD--FLSELGIMAHVDHPNTAKLLGY---GIEGGMHIVLELSPNGSLASLLYG-----MKEKLKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQIL*FWTNQLATGPMESSHKIKS-*RHFLAILPPEFLMLGKVKEKNPTFFAFRVLL 1021
            ++  AT+  + E +IG GG  +VYK  L+NG+ +A+K++     D+++++  F  E+  +  + H +  KL+GY     +G   ++ E   NGS+   L+       KE L W  R KIALG+ +G+ YLH  C              LL  + +  +  F   ++ TG  +++ +  +        + PE+    K  EK+  +    VL+
Sbjct:  940 DIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKIL--WKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLM 1149          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 3.115e-12
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 2
Query:  446 SFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVTEGLLYL 778
            S   L+GKG + EVYKG L++   VAIK        E+   FL E  I+   DHPN  KL+G   +   ++I++EL P G   + L   K++LK     + +L V  G+LYL
Sbjct:  565 SLGELLGKGNFGEVYKGTLKDKTPVAIKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLTFLRKRKDELKLKQLVRFSLDVAAGMLYL 676          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.115e-12
Identity = 71/222 (31.98%), Postives = 104/222 (46.85%), Query Frame = 2
Query:  407 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKR--LTRGT----------ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQIL*FWTNQLATGPMES---SHKIKS*RHFLAILPPEFLMLGKVKEKNPTFFAFRVLL 1021
            FS+ EL  AT+ FS    +G G +  VY+G L +G+ VAIKR  LT  T          AD+  A F++EL  M+ ++H N  +LLG+  +    I V E   NGSLA  L+  + + L W  R  IAL    G+ YLHE                LL   +  ++  F  +Q+  GP E    SH        L  + PE+    ++  K+   ++F V+L
Sbjct:  431 FSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSA-FVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQM--GPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDV-YSFGVVL 648          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.068e-12
Identity = 58/201 (28.86%), Postives = 85/201 (42.29%), Query Frame = 2
Query:  431 ATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRG--TADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLL-YGMKEKLKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQIL*FWTNQLATGPMESSHKIKS*RHFLAILPPEFLMLGKVKEKNPTFFAFRVLL 1021
            AT  FS  N IG GG+   YK  +    + A+KRL+ G    D+    F +E+  +  V HPN   L+GY   E  M ++      G+L   +    K  ++W + +KIAL V   L YLHE C              LL  ++   +  F  ++L       SH           + PE+ M  +V EK   +    VLL
Sbjct:  257 ATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQ---QFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLL--GTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLL 452          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 5.313e-12
Identity = 62/220 (28.18%), Postives = 104/220 (47.27%), Query Frame = 2
Query:  398 QKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQIL*FWTNQLATGPME-SSHKIKS*RHFLAILPPEFLMLGKVKEKNPTFFAFRVLLTGIWYTEP 1045
            ++ F+  E+   T NF  E ++GKGG+  VY G L + Q VA+K L+  +A     +F +E+ ++  V H +   L+GY  +G  + ++ E    G L   + G      L W  R +IA+   +GL YLH GC+             LL E  Q ++  F  ++  + P++  SH +         L PE+     + EK+   ++F V+L  I   +P
Sbjct:  557 ERKFTYSEVLKMTKNF--ERVLGKGGFGTVYHGNLDDTQ-VAVKMLSHSSAQGY-KEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSR--SFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDV-YSFGVVLLEIVTNQP 769          
BLAST of DY305369 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.313e-12
Identity = 59/206 (28.64%), Postives = 94/206 (45.63%), Query Frame = 2
Query:  287 LVTLYPLKLSIRRSSSMREGIDMPRNLFVNS--YDSQSPQKI------FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVTEGLLYLHEGCQXXXXXXXXXXXXXLLTEDFQPQIL*F 871
            +V +  L    R+  +    +  P ++ V++  ++SQS          F+  E+Q  TNNF  +  +G+GG+  VY G +   + VA+K L++ ++      F +E+ ++  V H N   L+GY  EG  + ++ E  PNG L   L G      L W  R KI L    GL YLH GC              LL +  Q ++  F
Sbjct:  519 VVVVVALFFVFRKKKASPSNLHAPPSMPVSNPGHNSQSESSFTSKKIRFTYSEVQEMTNNF--DKALGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGY-KHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADF 721          
The following BLAST results are available for this feature:
BLAST of DY305369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 222
Match NameE-valueIdentityDescription
Y1719_ARATH2.385e-1233.33Probable inactive receptor kinase At1g27190 OS=Ara... [more]
GSO1_ARATH2.385e-1233.09LRR receptor-like serine/threonine-protein kinase ... [more]
Y1699_ARATH3.115e-1228.99Probable LRR receptor-like serine/threonine-protei... [more]
Y1143_ARATH3.115e-1234.93Probable LRR receptor-like serine/threonine-protei... [more]
GSO2_ARATH3.115e-1226.42LRR receptor-like serine/threonine-protein kinase ... [more]
FER_MOUSE3.115e-1237.50Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
ACCR4_ARATH3.115e-1231.98Serine/threonine-protein kinase-like protein CCR4 ... [more]
RPK1_ARATH4.068e-1228.86Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH5.313e-1228.18Probable LRR receptor-like protein kinase At1g5189... [more]
Y2899_ARATH5.313e-1228.64Probable leucine-rich repeat receptor-like protein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3CF02RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305369 ID=DY305369; Name=DY305369; organism=Citrus clementina; type=EST; length=1101bp
GATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAG
AATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAA
TATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCT
TGAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAAC
CATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTA
TTCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTA
TCCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTG
ATATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAG
AAGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTT
CGAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTT
TGAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCA
GATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGT
CGATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCA
TGCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTT
TATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTT
AGGGGTAACCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAA
TCATTCATAGAAATATTTAAGCTGCCAATATTTTGCTCACTGAAGACTTC
CAGCCTCAGATTTTGTGATTTTGGACTAACCAATTGGCTACCGGACCAAT
GGAATCCTCCCACAAAATCAAAAGTTGAAGGCACTTTTTGGCTATCTTGC
CTCCGGAATTCTTAATGCTGGGGAAAGTAAAAGAAAAAAACCCAACTTTC
TTTGCCTTTCGTGTATTACTTACTGGAATTTGGTACACAGAACCCCGAAA
CTTTTGAATTCTTCTCCCCCAAAACCCCCTTTTTTTATGGGGCAAGGGCC
C
back to top