DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: Y1352_STAS1 (Uncharacterized hydrolase SSP1352 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1352 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 47/170 (27.65%), Postives = 81/170 (47.65%), Query Frame = 1
Query:   49 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            EL   +V +FQPAEE GGGA++++ AG  EK  + A+FG+HV P    G V  R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +P +  + GT R +  ++   +KQ++ ++      L      V+F
Sbjct:  116 ELPQNIVFIFQPAEETGGGANRLIRAGAFEKYPIEAVFGIHVMPFENEGRVVIRDEEITASATEYRFYLHGLSSHVADKEQGHSCGEALQHVLTQVGQIQQYHLNGLKRNIVHMGHFEAGEAINTVPSNGYLEGTIRTYDVKDLEIVKQQMTKISESVKLLFNVECEVKF 285          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: Y968_STAEQ (Uncharacterized hydrolase SERP0968 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0968 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14
Identity = 44/172 (25.58%), Postives = 81/172 (47.09%), Query Frame = 1
Query:   43 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            + EL   VV +FQPAEE GGGA+++++AG  +K  + A+FG HV+P    G++  R   + A +  +   + G   H A  +          +V+  +  +     + L   ++ +  F+ G A N +P    + GT R +  E+   +K ++ ++      L      V+F
Sbjct:  114 KSELPHNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGFHVNPFEKEGKIVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEGLQHVLSQIGQIQQFHLNGLKRNIIHMGHFEAGEAINTVPSHGYLEGTIRTYDTEDLAIVKHQMHKIAESVQLLFNVECEVKF 285          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: Y1078_STAES (Uncharacterized hydrolase SE_1078 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1078 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14
Identity = 44/172 (25.58%), Postives = 81/172 (47.09%), Query Frame = 1
Query:   43 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            + EL   VV +FQPAEE GGGA+++++AG  +K  + A+FG HV+P    G++  R   + A +  +   + G   H A  +          +V+  +  +     + L   ++ +  F+ G A N +P    + GT R +  E+   +K ++ ++      L      V+F
Sbjct:  114 KSELPHNVVFIFQPAEETGGGANRLIKAGAFDKYPIEAVFGFHVNPFEKEGKIVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEGLQHVLSQIGQIQQFHLNGLKRNIIHMGHFEAGEAINTVPSHGYLEGTIRTYDTEDLAIVKHQMHKIAKSVQLLFNVECEVKF 285          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: AMHX_BACSU (Amidohydrolase amhX OS=Bacillus subtilis GN=amhX PE=3 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGG-AFNVIP 423
            +TM LG   +L++  E  KGT+  +FQPAEE GGGA K++E GVL+ ++ ++G+HV P          P  L   S   E  I G+  H A P    + I  A+ ++  L  +     DP     V + K Q GG + N+IP
Sbjct:   96 MTMALGTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSILHGSSQHIEGTIIGEEAHGARPHLGKNSIEIAAFLVHKLGLI---HIDPQIPHTVKMTKLQAGGESSNIIP 234          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: ABGA_ECOLI (Aminobenzoyl-glutamate utilization protein A OS=Escherichia coli (strain K12) GN=abgA PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 57/214 (26.64%), Postives = 93/214 (43.46%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHA-AIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEFLAXXXXXXXXXXXXNDLQNTFPTVGWKIWFETQ 651
            LG A  L++    L G + L+FQPAEEG  GA  +++AGV++ V+    +H+   +P G V       +A +  F+A   G   HA A P+   + +LAA+   ++L H ++  ++   +  V V   Q G   NV+P S L+    RG S              +I Q    R    ++  A                 + P+  W  W ++Q
Sbjct:  158 LGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTK-FDAHFTGTAAHAGAKPEDGHNALLAAAQATLAL-HAIAPHSE--GASRVNVGVMQAGSGRNVVPASALLKVETRGASD-------------VINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQ 354          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: Y1513_STAHJ (Uncharacterized hydrolase SH1513 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1513 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.129e-12
Identity = 45/172 (26.16%), Postives = 80/172 (46.51%), Query Frame = 1
Query:   55 KGT----VVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            KGT    VV +FQPAEE GGGA+++++AG      + A+FG+HV+P    G+V  R   + A +  +   + G   H A  +       A  +V+  +  +     + L   +V +  F+ G A N +     + GT R +   +   +K ++ ++    + L      V+F
Sbjct:  114 KGTLPHNVVFIFQPAEETGGGANRLIKAGAFNNYPIEAVFGIHVNPFADEGQVVIRDEEITASATEYRFFLKGLSSHVADKEQGHSCGEALLHVLNQVGQIQQYHLNGLKRNIVHMGHFEAGEAINTVASHGYLEGTIRTYDPNDLNVVKTQMHKIAESVSLLFNVDCEVKF 285          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
Y1352_STAS13.213e-1427.65Uncharacterized hydrolase SSP1352 OS=Staphylococcu... [more]
Y968_STAEQ5.480e-1425.58Uncharacterized hydrolase SERP0968 OS=Staphylococc... [more]
Y1078_STAES5.480e-1425.58Uncharacterized hydrolase SE_1078 OS=Staphylococcu... [more]
AMHX_BACSU9.347e-1435.21Amidohydrolase amhX OS=Bacillus subtilis GN=amhX P... [more]
ABGA_ECOLI1.033e-1226.64Aminobenzoyl-glutamate utilization protein A OS=Es... [more]
Y1513_STAHJ5.129e-1226.16Uncharacterized hydrolase SH1513 OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
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