DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACCQ (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain Q1) GN=dapL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.443e-31
Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S E+ +++K RIE ++ G  A  +C A +++
Sbjct:  113 ERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYPVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMSRVKSRIEGIVAGIEASFQCEAIIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACCN (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dapL PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.099e-30
Identity = 69/182 (37.91%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +G   +     + +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P  P+G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S E+  ++K RIE ++ G  A  +C A +++
Sbjct:  102 IGLGLLTATVNDRIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNMILGLHIAPEYPVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHMANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKDRIEAIVAGIEAAFQCEAVIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACWK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus weihenstephanensis (strain KBAB4) GN=dapL PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.448e-30
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S E+  ++K RIE ++ G  A  +C A +++
Sbjct:  113 ERIDDDLVFIFQPAEEGPGGALPMLESDELKEWKPNMILGLHIAPEYSVGTIATKEGLLFANTSELYVDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIEAIVAGIEASFQCEAVIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACC4 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain B4264) GN=dapL PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.176e-30
Identity = 69/182 (37.91%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S E+  ++K RIE ++ G  A  +C A +++
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIESIVAGIEASFQCEAIIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACC2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain G9842) GN=dapL PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.454e-30
Identity = 69/182 (37.91%), Postives = 107/182 (58.79%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S E+  ++K RIE ++ G  A  +C A +++
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIEAIVAGIEASFQCEAIIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACA2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dapL PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.454e-30
Identity = 73/186 (39.25%), Postives = 109/186 (58.60%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +T+ LG       H   +K  ++ +FQPAEEG GGA  +LE+ VL+K   + I  LH+ P LP+G ++++ G L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+TV    GG A N+I +   + GT R  S+E+   +K+RIEE++ G     RC   V +
Sbjct:  100 MTIALGIIDHFVHH--PVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLITALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVVAASTLVTQLQTVISRNTDPLDSAVITVGTITGGTAQNIIAEHAHLEGTIRTLSEESMRMVKKRIEELVKGIEIGFRCKGKVTY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACCR (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29
Identity = 68/182 (37.36%), Postives = 106/182 (58.24%), Query Frame = 1
Query:   13 LGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +G   + +   E +   +V +FQPAEEG GGA  +LE+  L+  K N I GLH+ P   +G +A++ G L A +      + GKGGHAA P  + D I+AAS+++  LQ ++SR  +PLDS V+T+ K  GG   N+I +   + GT R  S E+  ++K RIE ++ G  A  +C   +++
Sbjct:  102 IGLGLLTKAVSERIDDDLVFLFQPAEEGPGGALPMLESEELKEWKPNIILGLHIAPEYAVGTIATKEGLLFANTSELYIDLKGKGGHAAYPHTANDMIVAASHLVTQLQSVISRNVNPLDSAVITIGKITGGTVQNIIAEKSRLEGTIRTLSVESMKRVKSRIESIVAGIEASFQCEVIIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BREBN (Putative N-acetyldiaminopimelate deacetylase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.587e-29
Identity = 68/186 (36.56%), Postives = 107/186 (57.53%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            + + LG      EH   +   ++ +FQPAEEG GGA  ++E+      + + IF LH+ P  P+G++A++PG L A +      + GKGGHAA P  + D ++A S+++  LQ ++SR  DPLDS VVT+ K + G   N+I +   + GT R FS E+   +K RIE ++ G      C AT+++
Sbjct:  100 MAIALGLLTHFTEH--SIADDLLFLFQPAEEGPGGAWPMMESEEFAEWRPDCIFALHIAPEYPVGQIATKPGILFANTSELYIDLVGKGGHAAFPHKANDMVVAGSHLVTQLQSIISRNIDPLDSAVVTIGKLESGTKQNIIAEKSRLEGTIRTFSMESMALVKSRIESLVKGVEIGFDCQATIDY 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: YHAA_BACSU (Putative amidohydrolase yhaA OS=Bacillus subtilis GN=yhaA PE=3 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.707e-29
Identity = 68/169 (40.24%), Postives = 100/169 (59.17%), Query Frame = 1
Query:   10 LLGAAKILQEHREELKGTVVLVFQPAEEG-GGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            LL  AK+L ++R ELKGT V++ Q AEE   GGA  +++ G LE  + IFG H+    P+G +  RPG ++A +  F   + GKGGH A P  + D +L  S ++ SLQH+VSR+ +P+ S V++   F     FNVI D  ++ GT R F +     L++ IE V+ G
Sbjct:  117 LLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGAKPMIDDGCLENTDVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGKGGHGAHPHDTKDAVLIGSQIVSSLQHIVSRKVNPIQSAVISTGSFIADNPFNVIADQAVLIGTARSFDENVRDILEKEIEAVVKG 285          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_GEOSW (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus sp. (strain WCH70) GN=dapL PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.617e-29
Identity = 66/186 (35.48%), Postives = 110/186 (59.14%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +++ LG      EH   ++  ++ +FQPAEEG GGA  +LE+ +++  K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA +++  LQ +V+R  DPLDS V+T+ K  GG   NVI +   + GT R  S ++  ++K+RIE ++ G     +C A +++
Sbjct:  101 MSIALGLLTHFAEH--PIQDDLLFIFQPAEEGPGGAKPMLESEIMKVWKPDMILALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACSLVTQLQSIVARNVDPLDSAVITIGKISGGTVQNVIAEHARLEGTIRTLSVDSMKKVKERIEAMVSGIKMAYQCEAEIDY 284          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_BACCQ6.443e-3140.35Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCN1.099e-3037.91Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACWK2.448e-3039.77Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC44.176e-3037.91Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACC25.454e-3037.91Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACA25.454e-3039.25Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACCR1.215e-2937.36Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BREBN1.587e-2936.56Putative N-acetyldiaminopimelate deacetylase OS=Br... [more]
YHAA_BACSU2.707e-2940.24Putative amidohydrolase yhaA OS=Bacillus subtilis ... [more]
DAPL_GEOSW4.617e-2935.48Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
back to top