DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACLD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dapL PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.617e-29
Identity = 66/174 (37.93%), Postives = 102/174 (58.62%), Query Frame = 1
Query:   43 REELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEFLA 558
            R  +K  ++ +FQPAEEG GGA  +LE+ + +K   + I  LH+ P LP+G + ++ G L A +      + GKGGHAA P  + D ++AAS+++  +Q +V+R  DPLDS V+T+    GG A N+I     + GT R  S  +  Q+K+RIE ++ G     +CS  V + A
Sbjct:  112 RHPVKQDLLFLFQPAEEGPGGAEPMLESDLFKKWEPSMITALHIAPELPVGTIGTKSGLLFANTSELVIELEGKGGHAAYPHLAEDMVVAASSLVTQMQSIVARNVDPLDSAVITIGTITGGSAQNIIAQEARLEGTIRTLSPASMEQVKKRIEAMVRGLETAYQCSGKVSYPA 285          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACSK (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus clausii (strain KSM-K16) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.343e-28
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +T+ LG       H  E    ++ +FQPAEEG GGA  ++EA VL   + + I+ LH+DPNLP+G +A++PG L A +        GKGGHAA P  + D ++A ++ +  +Q +V+R  DPLDS VVT+    GG   NVI  +  + GT R  S  +   +K R+E +  G  A   C   +++
Sbjct:   99 MTIALGLLDHFASHEPECH--LLFIFQPAEEGPGGAKPIIEADVLGAWQPDEIYALHIDPNLPVGSIATKPGLLFANTSELFIDFQGKGGHAAYPHTANDMVVACAHFVTQVQTVVARNIDPLDSAVVTLGVIAGGTKQNVIAATARLEGTIRTLSMASMEVVKSRLEAIAAGIEASFACKIAIDY 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACP2 (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus pumilus (strain SAFR-032) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.343e-28
Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 1
Query:   46 EELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIF--GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            E +K  ++ +FQPAEEG GGA  +L + VL+K    F   LH+ P  P+G +A++PG L A +      + GKGGHAA P  + D ++AAS ++  LQ ++SR  DPLDS V+T+    GG A N+I     + GT R  S E+  ++++RIE +  G      C ATV +
Sbjct:  114 EPIKEDLLFMFQPAEEGPGGAEPMLTSDVLKKWTPDFITALHIAPEYPVGTIATKPGLLFANTSELVIDLEGKGGHAAYPHLANDMVVAASALVGQLQSVISRNVDPLDSAVITIGTITGGTAQNIIAQHAKLDGTIRTLSPESMEKVRKRIEALAKGIEIGYECKATVRY 284          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_GEOKA (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus kaustophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.755e-28
Identity = 65/169 (38.46%), Postives = 99/169 (58.58%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            LK  ++ VFQPAEEG GGA  +LE+ ++   K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA  ++  LQ +V+R  DPLDS V+T+ K  GG   NVI +   + GT R  S     ++K+RIE ++ G      C A++++
Sbjct:  116 LKDDLLFVFQPAEEGPGGAKPMLESDIMREWKPDIIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDPLDSAVITIGKIAGGTVQNVIAEHARLEGTIRTLSTAAMQKVKRRIEAIVHGIEVAYECEASIDY 284          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.993e-28
Identity = 61/187 (32.62%), Postives = 107/187 (57.22%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGG--GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEFL 555
            V MLLG A +L ++++ + G + L+FQPAEE GG  GA  ++EAGV+  V+ +FG+H+  + P G  A+R GP++A    F+ V+ GKGGH + P  +IDPI  +  +  ++  + +R+ DP+   V+++     G   N+IPD   + GT R   +   ++ K  +  ++     +   +  V+F+
Sbjct:  112 VAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMATPDAFKIVVHGKGGHGSAPHETIDPIFISLQIANAIYGITARQIDPVQPFVISITTIHSGTKDNIIPDDAEMQGTIRSLDENVRSKAKDYMRRIVSSICGIYGATCEVKFM 298          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.105e-28
Identity = 59/187 (31.55%), Postives = 107/187 (57.22%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGG--GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEFL 555
            V MLLG A +L ++++ + G + L+FQPAEE GG  GA  ++EAGV+  V+ +FG+H+  + P G  A+R GP++A    F+ ++ GKGGH + P  +IDPI  +  +  ++  + +R+ DP+   ++++     G   N+IPD   + GT R   +   ++ K  +  ++     +   +  V+F+
Sbjct:  112 VAMLLGGAYLLVKNKDLISGEIRLIFQPAEEDGGLGGAKPMIEAGVMNGVDYVFGIHISSSYPSGVFATRKGPIMATPDAFKIIVHGKGGHGSAPHETIDPIFISLQIANAIYGITARQIDPVQPFIISITTIHSGTKDNIIPDDAEMQGTIRSLDENVRSKAKDYMRRIVSSICGIYGATCEVKFM 298          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: AMAA_BACST (N-acyl-L-amino acid amidohydrolase OS=Bacillus stearothermophilus GN=amaA PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.485e-27
Identity = 68/172 (39.53%), Postives = 104/172 (60.47%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQT 519
            MLLG AKI  + R++++G +  +FQ AEE   GGA ++++AGV++ V+ + G H+   L  G++    GP++A    F   I GKGGH A+P  +ID I   + V+ +LQH+VSR  DPL+  V++V +F  G A NV+P  V I GT R F +     + Q +E ++ G T
Sbjct:  112 MLLGTAKIFSQLRDDIRGEIRFLFQHAEELFPGGAEEMVQAGVMDGVDVVIGTHLWSPLERGKIGIVYGPMMAAPDRFFIRIIGKGGHGAMPHQTIDAIAIGAQVVTNLQHIVSRYVDPLEPLVLSVTQFVAGTAHNVLPGEVEIQGTVRTFDETLRRTVPQWMERIVKGIT 283          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_BACHD (Putative N-acetyldiaminopimelate deacetylase OS=Bacillus halodurans GN=dapL PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.644e-27
Identity = 67/186 (36.02%), Postives = 107/186 (57.53%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +T+  G  +    H+ E    ++ +FQPAEEG GGA  +L++        + I  LH+ P  P+G +A+R G L A +      + G+GGHAA P  + D ++AAS+++  LQ +VSR  DPLDS VVT+   +GG   N+I ++  I GT R  S E+  ++K+RIE ++ G      C A++++
Sbjct:   99 MTIAFGLLRHFAYHQPETH--LLFIFQPAEEGPGGAKPMLDSEEFRMWWPDEIIALHIAPEYPVGTIATRKGLLFANTSELFIDLKGQGGHAAYPHLANDMVVAASHLVTQLQSVVSRNVDPLDSAVVTIGVIKGGTKQNIIAETARIEGTIRTLSIESMKKVKKRIEALVSGIEIGFSCQASIDY 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LEUMM (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=dapL PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.628e-27
Identity = 62/174 (35.63%), Postives = 101/174 (58.05%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +++ LG  +   EH+   K  +++ FQPAEE   G    ++ G+ E     +  +G+H  PNLP G +++  G L AG+   E  I G+GGHAA P    DPI+ ++ +I+ LQ +VSR+ DP++  VV++    GG   NVIPD+V + GT R  +K+   ++  RI +++ G
Sbjct:  105 MSLALGLVQYFSEHQP--KDNLIVFFQPAEESKSGGKLAVDLGIFEGEWHPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELEIDIHGQGGHAAYPHLGKDPIVISAELIMLLQTVVSRDVDPIEGGVVSLGMISGGFTNNVIPDTVHLAGTVRSMTKDGLDKMTTRIRQIVEG 276          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_GEOTN (Putative N-acetyldiaminopimelate deacetylase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dapL PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.628e-27
Identity = 61/169 (36.09%), Postives = 97/169 (57.40%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            ++  ++ +FQPAEEG GGA  +LE+ ++   K + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AA  ++  LQ +V+R  DPLDS V+T+ K   G   NVI +   + GT R  S +    +K+RIE ++ G      C A +++
Sbjct:  116 IRDDLLFIFQPAEEGPGGAKPMLESDIMREWKPDMIVALHIAPEYPVGTIATKEGLLFANTSELFIDLKGKGGHAAFPHLANDMVVAACALVTQLQSIVARNVDPLDSAVITIGKITSGTVQNVIAEHARLEGTIRTLSIDAMQAVKRRIEALVRGVEVAYECEAVIDY 284          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_BACLD4.617e-2937.93Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACSK1.343e-2837.10Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_BACP21.343e-2839.77Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_GEOKA1.755e-2838.46Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]
CBPX2_SULSO2.993e-2832.62Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]
CBPX1_SULSO5.105e-2831.55Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
AMAA_BACST1.485e-2739.53N-acyl-L-amino acid amidohydrolase OS=Bacillus ste... [more]
DAPL_BACHD5.644e-2736.02Putative N-acetyldiaminopimelate deacetylase OS=Ba... [more]
DAPL_LEUMM9.628e-2735.63Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_GEOTN9.628e-2736.09Putative N-acetyldiaminopimelate deacetylase OS=Ge... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
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