DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_EXIS2 (Putative N-acetyldiaminopimelate deacetylase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dapL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26
Identity = 61/152 (40.13%), Postives = 94/152 (61.84%), Query Frame = 1
Query:   64 VVLVFQPAEEGGGGAHKVLEAGVLEKV--NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            VV +FQPAEEG GGA  ++++ + EK   + ++GLHV P  P+G +ASRPG L A +      I G+ GHAA P  +ID ++A + +I+ LQ +VSR  +P++  V+T+ K   G   NVI    L+ GT R  +  +  +L+QR+ ++I G
Sbjct:  117 VVFLFQPAEEGPGGAEPMIKSPLFEKYRPSEMYGLHVAPEYPVGTIASRPGVLFASAREVHITIYGQSGHAAFPHLTIDTVVAQAALIMQLQTIVSRSINPMNCSVITIGKVDAGIRENVIAGRALLDGTMRALNGTDMEKLEQRVRDIIRG 268          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_ANOFW (Putative N-acetyldiaminopimelate deacetylase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dapL PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26
Identity = 63/169 (37.28%), Postives = 100/169 (59.17%), Query Frame = 1
Query:   52 LKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            ++  ++ +FQPAEEG GGA  +LE+  +++   + I  LH+ P  P+G +A++ G L A +      + GKGGHAA P  + D ++AAS++I+ LQ +VSR  +PLDS V+T+ K   G   NVI +   + GT R  S E   ++K RIE ++ G      C A +++
Sbjct:  111 IRDDMLFIFQPAEEGPGGALPMLESDEMKQWMPDMILALHIAPAYPVGTIATKEGLLFANTSELFIDLIGKGGHAAFPHETKDMVVAASSLIMQLQTIVSRNVNPLDSAVITIGKLTSGTVQNVIAERARLEGTIRTLSPEAMEKVKGRIEAIVRGIEVAYDCQAHIDY 279          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: Y100_SYNY3 (Uncharacterized hydrolase sll0100 OS=Synechocystis sp. (strain PCC 6803) GN=sll0100 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.390e-25
Identity = 66/168 (39.29%), Postives = 94/168 (55.95%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVI 507
            T+ LG A +L +    L G V  +FQPAEE   GA  +++ G ++ V+ I G+HV P++P  +V  R G L A +   E  I G+ GH A P  +ID I  A+ VI +LQ  +SR  +PL   V+++ +  GG A NVI D V + GT R    E   QL Q IE ++
Sbjct:  109 TLGLGTAMVLSQMGHRLPGDVRFLFQPAEEIAQGASWMIQDGAMKGVSHILGVHVFPSIPAQQVGIRYGALTAAADDLEIFIQGESGHGARPHEAIDAIWIAAQVITALQQAISRTQNPLRPMVLSLGQISGGRAPNVIADQVRMAGTVRSLHPETHAQLPQWIEGIV 276          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LACRJ (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus reuteri (strain JCM 1112) GN=dapL PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.390e-25
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG      EH+ +    ++  FQPAEE   G  +  E G+     K +  +GLH +P+LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ K  GG   NVI     I GT RG ++     +  R+++V  G
Sbjct:  104 MTVALGVLNYFSEHQPQ--DNILFFFQPAEESENGGKRAYELGLFSGKWKPDEFYGLHDNPDLPAGAIGCRMGTLFAGTTEVNIDLNGKGGHAAYPQNANDTVVAAASLILQVQTVISRSIDPIQSGVITLGKIDGGTIRNVIAGHTRIEGTIRGLTQTMIETIDNRLKDVCEG 275          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LACRD (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus reuteri (strain DSM 20016) GN=dapL PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.390e-25
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG      EH+ +    ++  FQPAEE   G  +  E G+     K +  +GLH +P+LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ K  GG   NVI     I GT RG ++     +  R+++V  G
Sbjct:  104 MTVALGVLNYFSEHQPQ--DNILFFFQPAEESENGGKRAYELGLFSGKWKPDEFYGLHDNPDLPAGAIGCRMGTLFAGTTEVNIDLNGKGGHAAYPQNANDTVVAAASLILQVQTVISRSIDPIQSGVITLGKIDGGTIRNVIAGHTRIEGTIRGLTQTMIETIDNRLKDVCEG 275          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_OCEIH (Putative N-acetyldiaminopimelate deacetylase OS=Oceanobacillus iheyensis GN=dapL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.816e-25
Identity = 66/186 (35.48%), Postives = 103/186 (55.38%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            +T+ LGA + L +  + +   V+ VFQPAEEG GGA  +LE+   +  K + +F LH+ P LP+G V+S+ G L A +        G GGHAA P  + D  +AASN +V LQ +VSR  +PLD  V+T+ K + G   N I ++  + GT R    +    +K ++  ++ G      C+  V++
Sbjct:   99 MTIALGALEKLIQ--DPINDDVIFVFQPAEEGPGGAKPMLESEEFQQWKPDMMFALHIAPELPVGTVSSKAGLLFANTSELFIDFEGVGGHAAYPHLTKDMTVAASNFVVQLQQIVSRGLNPLDGSVITIGKMESGYVQNAIAETARLEGTIRSTDADAIDMIKSKLNRLMKGFEISYDCTIKVDY 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LEUCK (Putative N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain KM20) GN=dapL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.816e-25
Identity = 64/174 (36.78%), Postives = 96/174 (55.17%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +TM LG A+   +H+   K  +++ FQPAEE   G     + G+ E   + +  +G+H  PNLP G +++  G L AG+   +  + G GGHAA P  + DPI+ A+ +I+ LQ +VSR  DP+   VV+V    GG A NVIPD V   GT R  ++     +  RI ++  G
Sbjct:  106 MTMALGLAQYFSQHQP--KDNLIIFFQPAEEAESGGKVAYDMGLFEGKWRPDEFYGIHDQPNLPAGTLSTLAGTLFAGTAELKVDVIGTGGHAAYPHLAKDPIVIAAELIIQLQTVVSRSVDPIAGGVVSVGVINGGFANNVIPDQVHFEGTVRSMTRTGLETMLTRIRKIAEG 277          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LACH4 (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus helveticus (strain DPC 4571) GN=dapL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.816e-25
Identity = 62/174 (35.63%), Postives = 100/174 (57.47%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +++ LG      E++   K  ++  FQPAEE   G  K  E G+ E   + +  +GLH +P LP G +  R G L AG+      + GKGGHAA PQ++ D ++AA+++I+ +Q ++SR  DP+ S V+T+ K + G   NVI     I GT RG +++   Q+ QR++++  G
Sbjct:  106 MSVALGLLSYFSENQP--KDNLLFFFQPAEESESGGKKAYEDGIFEGKFRPDEFYGLHDNPELPAGAIGCREGTLFAGTTEVNIDLIGKGGHAAFPQNANDTVVAAASLIMQIQTVISRSIDPIQSGVITLGKVRAGTIRNVIAGQTRIEGTIRGLTQKMILQIDQRLQDLCEG 277          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_OENOB (Putative N-acetyldiaminopimelate deacetylase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25
Identity = 64/174 (36.78%), Postives = 96/174 (55.17%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKV---NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG      +H+   K  +++ FQPAEE   G  +  +AG  +     +  + LHV+P LP G++ASR G L AGS        GK GHAA PQ++ D I+AA+N + ++Q +VSR  DP++  VVT+ KF  G A N+I     I GT R F++     + + I  +  G
Sbjct:  104 MTVALGILSYFAKHQP--KDNLLVFFQPAEENEFGGKRFYDAGGFQGEYLPDEFYALHVNPQLPAGQIASRKGTLFAGSNELRISFIGKSGHAAYPQNAKDSIVAAANFVTNVQTVVSRNVDPIEGGVVTIGKFNAGKAMNIIAGKADIEGTIRSFTQSGMEIMTKHIRMIAEG 275          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISIV (Putative N-acetyldiaminopimelate deacetylase OS=Listeria ivanovii GN=dapL PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25
Identity = 59/165 (35.76%), Postives = 94/165 (56.97%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSAT 543
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +G++A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C  T
Sbjct:  116 KDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGQIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAFLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQCEVT 280          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_EXIS21.642e-2640.13Putative N-acetyldiaminopimelate deacetylase OS=Ex... [more]
DAPL_ANOFW1.642e-2637.28Putative N-acetyldiaminopimelate deacetylase OS=An... [more]
Y100_SYNY31.390e-2539.29Uncharacterized hydrolase sll0100 OS=Synechocystis... [more]
DAPL_LACRJ1.390e-2535.63Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LACRD1.390e-2535.63Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_OCEIH1.816e-2535.48Putative N-acetyldiaminopimelate deacetylase OS=Oc... [more]
DAPL_LEUCK1.816e-2536.78Putative N-acetyldiaminopimelate deacetylase OS=Le... [more]
DAPL_LACH41.816e-2535.63Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_OENOB2.371e-2536.78Putative N-acetyldiaminopimelate deacetylase OS=Oe... [more]
DAPL_LISIV2.371e-2535.76Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
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