DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISMH (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25
Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C   VEF
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMQIVWTRLKQLAKGWEEAYQCE--VEF 280          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISMF (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25
Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C   VEF
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQCE--VEF 280          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISMC (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dapL PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25
Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C   VEF
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQCE--VEF 280          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LACAC (Putative N-acetyldiaminopimelate deacetylase OS=Lactobacillus acidophilus GN=dapL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 62/174 (35.63%), Postives = 98/174 (56.32%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG      E++   K  ++  FQPAEE   G  +  E G+ +   K +  +GLH +P LP G +  R G L AG+      + GK GHAA PQ++ D ++AA+N+I+ +Q ++SR  DP+ S V+T+ K   G   NVI     I GT RG +++   Q+ +R+++V  G
Sbjct:  106 MTVALGLLSYFSENQP--KDNLLFFFQPAEESESGGKQAYEKGLFQGKFKPDEFYGLHDNPELPAGSIGCRMGTLFAGTTEINIDVIGKSGHAAFPQNANDTVVAAANLIMQIQTIISRSIDPIQSGVITLGKVNAGVIRNVIAGHTRIEGTIRGLTQKMILQIDRRLQDVCDG 277          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISW6 (Putative N-acetyldiaminopimelate deacetylase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dapL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25
Identity = 62/168 (36.90%), Postives = 95/168 (56.55%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            K  ++ VFQPAEEG GGA  ++E+      + + I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C   VEF
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESEEFAAWRPDTIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAFLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQCE--VEF 280          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISMO (Putative N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes GN=dapL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25
Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            K  ++ VFQPAEEG GGA  ++E+      + ++I+GLH+ P   +GE+A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C   VEF
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESTEFAEWRPDSIYGLHIAPEYKVGEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQCE--VEF 280          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LISIN (Putative N-acetyldiaminopimelate deacetylase OS=Listeria innocua GN=dapL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25
Identity = 61/168 (36.31%), Postives = 95/168 (56.55%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVEF 552
            K  ++ VFQPAEEG GGA  ++E+      + + I+GLH+ P   +G++A +PG L A +        GKGGHAA P  + D ++AAS  +  +Q ++SR  DP+DS V+T+ +  GG   NVI ++  + GT R  S E    +  R++++  G     +C   VEF
Sbjct:  115 KDNLLFVFQPAEEGPGGAKPIMESAEFSEWRPDTIYGLHIAPEYKVGQIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDPMDSAVITIGRIHGGEIQNVIAETAFLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQCE--VEF 280          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_PEDPA (Putative N-acetyldiaminopimelate deacetylase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dapL PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.011e-25
Identity = 60/186 (32.26%), Postives = 98/186 (52.69%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLE---KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +    H+ +    ++  FQPAEE   G+ +   A +     + N  +GLH  P LP G +  R G L AG+      + GKGGHAA PQ + D ++A + +I  LQ +V+R  +P++  V+T+ K   G   NVI D  +I GT RG +++    ++QR++++  G      C   V+
Sbjct:  105 MTVALGILEYFANHQPQ--DNLIFFFQPAEESHSGSVRAFNANIFTNQFRPNEFYGLHSTPTLPAGVIGCRMGTLFAGTTEVNLKLTGKGGHAAYPQDANDMVVAQAYLITQLQTIVARNVNPIEGGVLTLGKVSAGNVRNVIADQAVIEGTIRGLTQKMILLIQQRVQQICEGTAQAFNCQVEVK 288          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: HIPO_CAMJE (Hippurate hydrolase OS=Campylobacter jejuni GN=hipO PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24
Identity = 68/175 (38.86%), Postives = 99/175 (56.57%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNA--IFGLHVDPNLPIGEVAS---RPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            T LL AAK L    +   G + L FQPAEEG GGA  ++E G+ EK ++  +FG H   N+P G       + G ++A S  +   + G+GGH + P+ + DPI AAS +IV+LQ +VSR  DP +S VV++  F  G AFN+IPD   I  + R    E     +++I ++  G
Sbjct:  108 TSLLLAAKYLAS--QNFNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGWH---NMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQSIVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICKG 277          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_ENTFA (Putative N-acetyldiaminopimelate deacetylase OS=Enterococcus faecalis GN=dapL PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.841e-24
Identity = 65/184 (35.33%), Postives = 97/184 (52.72%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATV 546
            +T+ LG  K L + + +     + +FQPAEE   G   + E     +   +  + LHV+P+LP+G +++R G L A +      + GKGGHAA P  + D +LAA+N+I   Q +VSR  DP+   VVT   F  G A NVI +   + GT R  + E   Q ++RI E+  G     +C  TV
Sbjct:  103 MTIGLGVLKELSQQQPD--NNFLFLFQPAEENEAGGMLMYEDHAFGEWLPDEFYALHVNPDLPVGTISTRVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPVVGAVVTFGTFHAGTACNVIAEEATLSGTIRTLTAETNEQTQRRIREISEGIAQSFQCEVTV 284          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_LISMH3.097e-2536.90Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMF3.097e-2536.90Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMC3.097e-2536.90Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LACAC4.045e-2535.63Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_LISW65.283e-2536.90Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISMO5.283e-2536.90Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_LISIN5.283e-2536.31Putative N-acetyldiaminopimelate deacetylase OS=Li... [more]
DAPL_PEDPA9.011e-2532.26Putative N-acetyldiaminopimelate deacetylase OS=Pe... [more]
HIPO_CAMJE4.472e-2438.86Hippurate hydrolase OS=Campylobacter jejuni GN=hip... [more]
DAPL_ENTFA5.841e-2435.33Putative N-acetyldiaminopimelate deacetylase OS=En... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
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