DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LACLM (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dapL PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.467e-22
Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG  + L E +   K  ++ +FQPAEE   G   + + G  +    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  +  +Q +VSR  DPLDS VVT  K + G   N+I +   + GT R  ++E     ++R+ E+  G
Sbjct:   99 MTVALGLLEKLSESQP--KNNLLFLFQPAEENEAGGKLMYDGGAFKNWLPDEFYGLHVRPDLKVGDIATNEQTLFAGTCEVELTFVGTGGHAAFPHTANDALVAAAYFVTQVQTIVSRNVDPLDSAVVTFGKMEAGTTNNIIAERAFLHGTIRSLTQEVNELTQKRLTELAKG 269          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRPN (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae GN=dapL PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22
Identity = 62/185 (33.51%), Postives = 98/185 (52.97%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRZP (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain P1031) GN=dapL PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       N  +GLHV P+L +G++A+    L  G+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI ++  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPNQFYGLHVRPDLKVGQIATNTHTLFVGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITETAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRP4 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=dapL PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++ AS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDGAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVVASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRZJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain JJA) GN=dapL PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRR6 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dapL PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRPJ (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=dapL PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRPI (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=dapL PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRP2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=dapL PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATVE 549
            +T+ LG  +   E  E+ K  ++ +FQPAEE   G   + E         +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  +P++  VVT   FQ G   NVI D+  + GT R  +++    +++R++ V  G  A       VE
Sbjct:  100 MTIALGCLERALE--EQPKNNLLFLFQPAEENEAGGMLMYEDDAFGDWLPDQFYGLHVRPDLKVGQIATNTHTLFAGTCEVKIRFKGKGGHAAFPHEANDALVAASYFVTQVQSVVSRNVNPIEGAVVTFGVFQAGTTNNVITDTAFLHGTIRALTQDMSLLVQKRVKTVAEGVAAAFDMEVEVE 282          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRGC (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=dapL PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   64 VVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+  G L AG+   +    GKGGHAA P  + D ++AAS  I  +Q +VSR  DP++  VVT      G   NVI ++  + GT R  ++E     ++R+ E+  G
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALIAASYFITQVQTIVSRNVDPIEGAVVTFGSLHAGTTNNVIAETAFLHGTIRTLTQEMNLLTQKRLREIAEG 270          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_LACLM5.467e-2234.10Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
DAPL_STRPN7.140e-2233.51Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZP1.591e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP42.077e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRZJ4.628e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRR64.628e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPJ4.628e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRPI4.628e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRP24.628e-2132.97Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRGC1.031e-2035.53Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
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