DY305396

Overview
NameDY305396
Unique NameDY305396
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRSV (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus sanguinis (strain SK36) GN=dapL PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   64 VVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            ++ +FQPAEE   G   + E G       +  +GLHV P+L +G++A+  G L AG+   +    GKGGHAA P  + D ++AAS  I  +Q +VSR  DP++  VVT      G   NVI ++  + GT R  ++E     ++R+ E+  G
Sbjct:  119 LLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDLKVGDIATNRGTLFAGTCEVKLTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIEGAVVTFGSLHAGTTNNVIAETAFLHGTIRTLTQEMNLLTQKRLREIAEG 270          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRSY (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 05ZYH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 57/173 (32.95%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  VVT      G   NVI ++  + GT R  ++     +++R+ EV  G
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQNMSLLVQKRVREVAEG 270          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRS2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus suis (strain 98HAH33) GN=dapL PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20
Identity = 57/173 (32.95%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG  + + E  ++ +  ++ +FQPAEE   G   + EAG       +  +GLHV P+L +G++A+    L AG+   +    GKGGHAA P  + D ++AAS  +  +Q +VSR  DP++  VVT      G   NVI ++  + GT R  ++     +++R+ EV  G
Sbjct:  100 MTIALGLLEKMAE--QQPRNNLLFLFQPAEENLAGGMLMYEAGAFGDWLPDEFYGLHVRPDLKVGQMATNRATLFAGTCEVKIRFTGKGGHAAFPYTANDALVAASYFVTQVQSVVSRNVDPIEGAVVTFGSMHAGTTNNVIAETAFLHGTIRALTQNMSLLVQKRVREVAEG 270          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: Y4TI_RHISN (Uncharacterized hydrolase y4tI OS=Rhizobium sp. (strain NGR234) GN=NGR_a01500 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.297e-20
Identity = 59/182 (32.42%), Postives = 89/182 (48.90%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGG-GAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTALTRCSATV 546
            ++ +G A      R    G + + FQPAEE    G   VLE  +LE  +   G HV P++ +G+  +R G +   S  F+  + G   H + P + ID I  A+  +  +Q ++SRE    D  V+T+    GG A N+I   V++ GT R  + E    L QR+ E+  G  AL R  A V
Sbjct:  119 SIAMGVALAFHRMRNNFAGKLRVFFQPAEEAEPLGGRTVLEERLLEGFDNAVGFHVTPSIQVGKFGAREGAVSKSSDQFKVTVSGSAAHGSTPHNGIDAITIAAAFVNEVQKVISREVPVDDRSVITIGTIHGGEATNIICPKVVMEGTIRTTNPELRPLLSQRVREIAEGVAALHRGKAEV 300          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRTD (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTA 522
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VVT   F  G   NVI ++  + GT R  ++E    +++R+ ++  G  A
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVIAETAEVYGTIRTLTQEMSLLIQKRVRQIAEGVAA 274          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRT2 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTA 522
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VVT   F  G   NVI ++  + GT R  ++E    +++R+ ++  G  A
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVIAETAEVYGTIRTLTQEMSLLIQKRVRQIAEGVAA 274          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRT1 (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dapL PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIGQTA 522
            K  ++ +FQPAEE   G   + E G       +  +GLHV P+  +G++A+    L AG+        GKGGHAA P  + D ++AAS  I  +Q +VSR  DP+   VVT   F  G   NVI ++  + GT R  ++E    +++R+ ++  G  A
Sbjct:  117 KNNMLFLFQPAEENEAGGMLMYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTNTLFAGTCEVLVTFKGKGGHAAFPHEANDALVAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVIAETAEVYGTIRTLTQEMSLLIQKRVRQIAEGVAA 274          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_LACLA (Putative N-acetyldiaminopimelate deacetylase OS=Lactococcus lactis subsp. lactis GN=dapL PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK--VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            +T+ LG  + + E +   +  ++ +FQPAEE   G   + +A   E    +  +GLHV P+L +G++A+    L AG+   E    G GGHAA P  + D ++AA+  I  +Q +VSR  DPL S VVT  K + G   N+I +   + GT R  ++E     ++R+ E+  G
Sbjct:   99 MTVALGLLEKMSESQP--RDNLLFLFQPAEENEAGGKLMYDARAFENWLPDEFYGLHVRPDLKVGDIATNQHTLFAGTCEVELSFIGTGGHAAFPHTANDALVAAAYFITQVQTIVSRNVDPLASAVVTFGKMEAGTTNNIIAERAFLHGTIRSLTQEVNELTQKRLRELANG 269          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: CAAL4_RHOSR (Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro04240 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 59/169 (34.91%), Postives = 93/169 (55.03%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGG-GGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVI 507
            TML+GAA +L ++    +  V LVFQPAEE   GGA   + AG L+ V+ IF LH DP+L +G++++R GP+ + +      +   GGH A P  + D I A + ++  L  ++ R  D   + V+T  K   G   N +P+S  + GT R  S+E +  L+  + + I
Sbjct:  514 TMLMGAASVLTKYPPPTR--VRLVFQPAEETTPGGAVDTIAAGALDGVSKIFALHCDPHLEVGKLSTRTGPITSSNDSVTVRLWSAGGHTARPHLTGDLIHATAVLVTGLASVLDRRIDARTATVLTWGKVAAGQVANSVPESGELVGTLRSASRETWASLEPLVTDAI 680          
BLAST of DY305396 vs. ExPASy Swiss-Prot
Match: DAPL_STRMU (Putative N-acetyldiaminopimelate deacetylase OS=Streptococcus mutans GN=dapL PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.117e-20
Identity = 52/155 (33.55%), Postives = 85/155 (54.84%), Query Frame = 1
Query:   55 KGTVVLVFQPAEEGGGGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRGFSKENFTQLKQRIEEVIIG 513
            K  ++ +FQPAEE   G   + E G     + +  +GLHV P+  +G++A+    L AG+        GKGGHAA P ++ D ++AAS  I  +Q +VSR  DP++  VVT      G   NVI ++  + GT R  +++    +++R++E+  G
Sbjct:  117 KNNLLFLFQPAEENEAGGMLMYEDGAFGNWQPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVFITFKGKGGHAAFPHNANDALVAASYFITQVQTIVSRNVDPIEGGVVTFGSMHAGTTNNVIAETATLHGTIRTLTQDMSLLIQKRVQEMARG 271          
The following BLAST results are available for this feature:
BLAST of DY305396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DAPL_STRSV1.347e-2035.53Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRSY1.759e-2032.95Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRS21.759e-2032.95Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
Y4TI_RHISN2.297e-2032.42Uncharacterized hydrolase y4tI OS=Rhizobium sp. (s... [more]
DAPL_STRTD3.000e-2034.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT23.000e-2034.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_STRT13.000e-2034.18Putative N-acetyldiaminopimelate deacetylase OS=St... [more]
DAPL_LACLA3.000e-2033.53Putative N-acetyldiaminopimelate deacetylase OS=La... [more]
CAAL4_RHOSR3.918e-2034.91Carboxylate-amine ligase RHA1_ro04240 OS=Rhodococc... [more]
DAPL_STRMU5.117e-2033.55Putative N-acetyldiaminopimelate deacetylase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA12RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305396 ID=DY305396; Name=DY305396; organism=Citrus clementina; type=EST; length=758bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAATTTCAAGGAG
GTGGTGCATTCAATGTCATTCCAGATTCAGTATTAATTGGAGGCACTTTC
CGGGGCTTTTCAAAGGAAAACTTCACGCAACTAAAGCAACGTATTGAGGA
GGTTATCATTGGGCAAACTGCCTTAACAAGATGCAGTGCAACTGTTGAAT
TTCTGGCAAAAAAAAAACCCTTTTTCCCTCCCACCTAAACAAAAAACGAT
TTGCAAAATACCTTTCCAACTGTTGGCTGGAAAATATGGTTTGAAACTCA
AAAAATTTAAGGGTAAGGGGCCCCGGTGGAGGGGAATTGGAAAAATTTTT
CCCTTTTTTACCAAAAAAAATAAGGGCCGGGGAAAACTTTCTTTTTTTTC
CCAGAGGG
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