DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 1.027e-67
Identity = 122/202 (60.40%), Postives = 162/202 (80.20%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA+ LK +LF+NL++HP+F++DTK A+ + Y  TD  FL+SE +  RD GSTAS A+ VG+ L VAN GDSR ++ + G AIA+S DHKP+++DER+RIE AGG +MWAGTWRVGGVLA+SRAFG+R+LKQ+VVA+PEIQ+  ID   E L+LASDGLWDVV NE+AVA+ +  ++PE AA++L   A+ RGSADN+TC+VV
Sbjct:  144 AAEYLKEHLFNNLMKHPQFLTDTKLALNETYKQTDVAFLESEKDTYRDDGSTASAAVLVGNHLYVANVGDSRTIVSKAGKAIALSDDHKPNRSDERKRIESAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQSEEEPEAAARKLTDTAFSRGSADNITCIVV 345          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 3.313e-58
Identity = 111/203 (54.68%), Postives = 154/203 (75.86%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKS-ENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA+ LK +LF NL++HPKF+ DTK AI   +  TD++FL+S  +++ RD GSTA  AI +G+RL VAN GDSRAV  + G A+ +S DHKP++ DER+RIEDAGG V+    WRV G+LAVSRAFG+RL+K+YV A+P IQE+V+D  LE+L+LA+DGLWDV+ NE+AV+++K    P+ AA +L + A  R + DN+TC+V+
Sbjct:  165 AAEYLKKHLFKNLVKHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTAVAAILIGNRLYVANVGDSRAVALKAGKAVPLSEDHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFGNRLMKRYVKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLKAQDGPKAAAMKLTEVARSRLTLDNVTCIVL 367          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 9.639e-58
Identity = 110/203 (54.19%), Postives = 153/203 (75.37%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKS-ENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA+ LK +LF NL+ HP+ + DTK AI+  +  TD++FL+S  +N  RD GSTA TAI VG+ L V N GDSR V  + G A+ +S DHKP++ DE++RIEDAGG V++  TWRV G+LA+SRAFG+R LK YV A+P+IQE+V+D SLE+LILA+DGLWDV+ NE+AV+++K    P+ AA +L + A+ R + DN+TC+V+
Sbjct:  139 AAEYLKEHLFENLVNHPELLRDTKLAISQTFLKTDADFLESVSSNPFRDDGSTAVTAILVGNHLYVGNVGDSRVVALKAGKAVPLSEDHKPNRKDEQKRIEDAGGIVVFDDTWRVNGLLAMSRAFGNRALKHYVKAEPDIQEKVVDESLEYLILATDGLWDVMRNEDAVSLLKAQDGPKAAAMKLTEVAHSRLTLDNITCIVL 341          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 8.758e-43
Identity = 98/201 (48.76%), Postives = 137/201 (68.16%), Query Frame = 3
Query:   15 LKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            LK NLF N+++ P F ++ + AI +AY  T+   L++   Q    GSTA TAI V G  + VAN GDSRAV+C  G A  ++ DH+P  T+ERQRIE  GGFV        RV G LAV+RAFGD+ LK ++ ++P+++   I+SS+EF+ILASDGLW V+ N+EAV ++K I+DP+ AAKRL  EA  R S D+++C+V+
Sbjct:  118 LKANLFCNILKEPIFWTNPQEAIKNAYRSTNKYILENAK-QLGPGGSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGFVTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVKSIKDPQAAAKRLTTEALARKSKDDISCIVI 317          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.347e-42
Identity = 97/205 (47.32%), Postives = 135/205 (65.85%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA L KH LFSN+++  +F+ D + AIA AY +TD + L          GSTA TAI + G  L +AN GDSRA++   G A  +S DH PD   ER  IE  GGFV        RV G+LAVSR FGD+ LK Y+ ++PEI++  IDS  +FLILASDG+  V++N+EAV + K ++DP+EAA++++ EA +R S D+++C+VV
Sbjct:   77 AAYLQKH-LFSNILKDGEFLVDPRRAIAKAYENTDQKILADNRTDLESGGSTAVTAILINGKALWIANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSRVFGDKNLKAYLNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKKLKDPKEAARQVVAEALKRNSKDDISCIVV 280          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.265e-41
Identity = 98/209 (46.89%), Postives = 141/209 (67.46%), Query Frame = 3
Query:    9 DLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDR----LLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVL 617
            D L+ +LF N+++ P+F+S+ ++AI +AY  TD++ L+S     R  GSTA TAI +       L+VAN GDSRAVI + G A  +S DH+P++  ER  IE  GGFV  +     RV G LAV+RAFGDR LK+++ ++P++ EE ID + +FLILASDGLW V++N+EAV  IK  +D + AAK L ++A  R S D+++C+VV  L
Sbjct:   84 DFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGR-GGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNK--ERHSIEKKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVDEIKDFKDAQAAAKHLTEQAVNRKSKDDISCIVVKFL 289          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.826e-40
Identity = 94/201 (46.77%), Postives = 134/201 (66.67%), Query Frame = 3
Query:   15 LKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            L+  LFSN+++  +F  D + +IA AY  TD   L + ++  R  GSTA TAI + G +L +AN GDSRAV+  GG    +S DH+P    ER  IED GGFV  +     RV G LAVSRAFGD+ LK ++ ++P+I+E  +DS  + L+LASDG+W V+TNEEA+ + + ++DP++AAK L  EA +R S D+++CVVV
Sbjct:   81 LQKRLFSNILKEGEFWVDPRRSIAKAYEKTDQAILSNSSDLGR-GGSTAVTAILINGRKLWIANVGDSRAVLSHGGAITQMSTDHEP--RTERSSIEDRGGFVSNLPGDVPRVNGQLAVSRAFGDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWKVMTNEEAMEIARRVKDPQKAAKELTAEALRRESKDDISCVVV 278          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 1.184e-39
Identity = 92/203 (45.32%), Postives = 137/203 (67.49%), Query Frame = 3
Query:    6 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVV 605
            A  L+ NLF N+++   F +DTK+AI +AY  TD+  L+      +  GSTA T I + G  L++AN GDSRAV+ + G A  +S DH+P +  E++ IE  GGFV  +     RV G LAV+RAFGD+ LK ++ +DP+I++E ID   EF++ ASDG+W V++N+EAV +IK I+DP+ AAK L++EA  + S D+++C+V
Sbjct:   76 AKYLQTNLFDNILKEKDFWTDTKNAIRNAYISTDAVILEQSLKLGK-GGSTAVTGILIDGKTLVIANVGDSRAVMSKNGVASQLSVDHEPSK--EQKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSDPDIRDENIDHETEFILFASDGVWKVMSNQEAVDLIKSIKDPQAAAKELIEEAVSKQSTDDISCIV 275          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 3.444e-39
Identity = 92/204 (45.10%), Postives = 135/204 (66.18%), Query Frame = 3
Query:    6 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            A  L+ NLF N+++   F +DT++AI +AY  TD+  L+      +  GSTA T I + G +L+VAN GDSRAV+ + G A  +S DH+P +  E++ IE  GGFV  +     RV G LAV+RAFGD+ LK ++ ++P+I  + ID   EF++ ASDG+W V++N+EAV  IK I+DP  AAK L++EA  R S D+++C+VV
Sbjct:   80 AKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGK-GGSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSK--EKKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVLSNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVV 280          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.002e-38
Identity = 94/201 (46.77%), Postives = 132/201 (65.67%), Query Frame = 3
Query:   15 LKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            L+ +LFSN+++  +F  D + +I  AY  TD   L   ++  R  GSTA TAI + G RL VAN GDSRAV+ +GG AI ++ DH+P    ER  IE  GGFV  M     RV G LAVSRAFGD+ LK ++ +DP++++  ID   + L+LASDGLW V+ N+EA+ + + I+DP +AAK L  EA +R S D+++C+VV
Sbjct:   82 LQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLGR-GGSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEPHT--ERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVV 279          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C76_ARATH1.027e-6760.40Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C55_ORYSJ3.313e-5854.68Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C56_ORYSJ9.639e-5854.19Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C44_ORYSJ8.758e-4348.76Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C17_ARATH4.347e-4247.32Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C62_ORYSJ1.265e-4146.89Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C09_ARATH1.826e-4046.77Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C20_ARATH1.184e-3945.32Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C58_ARATH3.444e-3945.10Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C10_ARATH1.002e-3846.77Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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