DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9297 contig Ccv1_Contig9297:1..1222. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.709e-38
Identity = 97/201 (48.26%), Postives = 128/201 (63.68%), Query Frame = 3
Query:   15 LKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            L+ NLF+N++   +F++    AI  AY  TD   L S        GSTA TAI + G +L VAN GDSRAV+ +GG  I +S DH P+   ER  IE+ GGFV  M     RV G LAVSRAFGDR LK  + ++P+I+ E ID + E L+LASDGLW V+ N+E V + K  +DP+ AAK+L  EA +R S D+++CVVV
Sbjct:   83 LQKNLFANILNEEEFLTQPDRAIIKAYEKTDQAIL-SHTPDLGQGGSTAVTAILLNGRKLWVANVGDSRAVLLKGGRPIQMSTDHDPNV--ERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKRFKDPQAAAKQLTAEALKRDSKDDISCVVV 280          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.709e-38
Identity = 95/203 (46.80%), Postives = 132/203 (65.02%), Query Frame = 3
Query:    9 DLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVG-DRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV--MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            D L  +LF N+++ P F  + + AI  AY  TD+  L   ++  +  GSTA TAI +   +L+VAN GDSRAVIC+ G A  +S DH+P+   E+  IE+ GGFV        RV G LAV+RAFGD+ LK ++ ++P +  E+ID   EFLILASDGLW V++N+EAV  IK I+D + AAK L +EA  R S+D+++ VVV
Sbjct:   87 DYLCSHLFENILKEPNFWQEPEKAIKKAYYITDTTILDKADDLGK-GGSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNM--EKDEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIKGIKDAKAAAKHLAEEAVARKSSDDISVVVV 286          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 7.182e-37
Identity = 86/188 (45.74%), Postives = 120/188 (63.83%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE------AAKRLMQEAYQRGSADNLTCVVV 608
            +T+ A+   Y  TD EFLK E +     G+   TA+     L+V+N GD RAV+ R G A A++ DH+  + DER+RIE+ GGFV+ + GTWRV G LAVSR  GD  LKQ+VV+DP+     +DS  EFLILASDGLWD V N+EAV + +P+    +      A +RL++ A  RGS D+++ V++
Sbjct:  201 ETEQAVKRCYLKTDEEFLKREES----GGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVDIARPLYISNDKASRMTACRRLVETAVTRGSTDDISIVII 384          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.941e-35
Identity = 91/208 (43.75%), Postives = 128/208 (61.54%), Query Frame = 3
Query:    6 ADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPV-GDRLLVANEGDSRAVICRGGNAIA-VSRDHKPDQTDERQRIEDAGGFVMW--AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVL 617
            AD L+++LF N++  P F  + K AI  AY  TD   L  +N      GSTA TAI + G +++VAN GDSRA++CR  + +  ++ DH+PD+  ER  ++  GGFV        RV G LA++RAFGD  LK+++   P I+   I    +FLILASDGLW V++N+E    IK   + EEAAK L+ +A  RGS D+++CVVV  L
Sbjct:   32 ADYLQNHLFDNILSQPDFWRNPKKAIKRAYKSTDDYIL--QNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDK--ERDLVKSKGGFVSQKPGNVPRVDGQLAMTRAFGDGGLKEHISVIPNIEIAEIHDDTKFLILASDGLWKVMSNDEVWDQIKKRGNAEEAAKMLIDKALARGSKDDISCVVVSFL 235          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.147e-34
Identity = 82/186 (44.09%), Postives = 118/186 (63.44%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA-GTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPE--EAAKRLMQEAYQRGSADNLTCVVV 608
            +SAI + Y  TD +FLK  +      G+   TA+     L V+N GD RAV+ RGG A A++ DH P Q +E +RIE  GG+V    G WR+ G LAVSR  GDR LK++V+A+PE +   I    EFLILASDGLWD VTN+EAV +++P    +++P    A K+L + + +RGS D+++ +++
Sbjct:  202 ESAIREGYIKTDEDFLKEGSR----GGACCVTALISKGELAVSNAGDCRAVMSRGGTAEALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVRPYCVGVENPMTLSACKKLAELSVKRGSLDDISLIII 383          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.147e-34
Identity = 91/215 (42.33%), Postives = 132/215 (61.40%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSH----TDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE------AAKRLMQEAYQRGSADNLTCVVVPV 614
            AA+    NL  N++       D +S IA+A  H    TD+ FLK E+ +    GS   TA+     L+V+N GD RAV+  GG A A+S DH+P + DER+RIE  GG+V  + G WR+ G LAVSR  GD  LK++V+A+PE +   I+   EFLILASDGLWD V+N+EAV + +P+    E      A K+L+  +  RGS+D+++ +++P+
Sbjct:  182 AAEFAAKNLDKNIVEEVVGKRD-ESEIAEAVKHGYLATDASFLKEEDVKG---GSCCVTALVNEGNLVVSNAGDCRAVMSVGGVAKALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFLILASDGLWDKVSNQEAVDIARPLCLGTEKPLLLAACKKLVDLSASRGSSDDISVMLIPL 392          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.956e-34
Identity = 89/213 (41.78%), Postives = 128/213 (60.09%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRH---PKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI-------QDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA+    NL SN++      +  S  + A+   Y  TDSEFLK +N +    GS   TA+     L+VAN GD RAV+  GG A A++ DH+P + DER RIE +GG+V  +   WR+ G LAVSR  GD  LKQ+++++PEI    I+   EFLILASDGLWD V+N+EAV + +P        + P  A K+L+  +  RGS D+++ +++
Sbjct:  165 AAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFLKEKNVKG---GSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIARPFCKGTDQKRKPLLACKKLVDLSVSRGSLDDISVMLI 374          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.817e-33
Identity = 84/189 (44.44%), Postives = 118/189 (62.43%), Query Frame = 3
Query:   51 PKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA--GTWRVGGVLAVSRAFGDRLLKQYVVADPEI-QEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            P       +AI  AY  TDSEFL    +Q    G+ A+TA+ +   L VAN GD RAVI R G A A++ DH P + DER RIE +GG+V     G WRV   LAV+R+FGD  LK++VVA+PE+ +  +  +  EFL++ASDGLW+ V+N+EAV  +       ++ +RL+  A +RGS D++T +VV
Sbjct:  205 PAAADHVAAAIRAAYLATDSEFL----SQGTRGGACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRWVVAEPEVSRTPLAGAGCEFLVIASDGLWNKVSNQEAVDAVAAGHYSVDSCRRLVDMARRRGSRDDVTVMVV 389          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.391e-32
Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVIC-RGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK--QYVVADPEIQEEVIDS-SLEFLILASDGLWDVVTNEEAVAMIKP-IQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            D E L+       +AG+T   A+     L VAN GDSR V+C + GNAI +S DHKP Q  ER+RI+ AGGF+ + G+WRV G+LA+SR+ GD  LK    V+ DP+I    +D    EF+ILASDGLWD  +NEEAV  IK  + +P   AK ++ +++ RG  DN+T +VV
Sbjct:  177 DREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGCPDNITVMVV 349          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.391e-32
Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVIC-RGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK--QYVVADPEIQEEVIDS-SLEFLILASDGLWDVVTNEEAVAMIKP-IQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            D E L+       +AG+T   A+     L VAN GDSR V+C + GNAI +S DHKP Q  ER+RI+ AGGF+ + G+WRV G+LA+SR+ GD  LK    V+ DP+I    +D    EF+ILASDGLWD  +NEEAV  IK  + +P   AK ++ +++ RG  DN+T +VV
Sbjct:  177 DREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGCPDNITVMVV 349          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C41_ORYSJ1.709e-3848.26Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C39_ARATH1.709e-3846.80Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C32_ORYSJ7.182e-3745.74Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C28_ARATH3.941e-3543.75Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C30_ARATH1.147e-3444.09Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C25_ARATH1.147e-3442.33Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
P2C02_ARATH1.956e-3441.78Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C74_ORYSJ4.817e-3344.44Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
PPM1L_MOUSE2.391e-3246.82Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1L_HUMAN2.391e-3246.82Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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