DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.391e-32
Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVIC-RGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK--QYVVADPEIQEEVIDS-SLEFLILASDGLWDVVTNEEAVAMIKP-IQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            D E L+       +AG+T   A+     L VAN GDSR V+C + GNAI +S DHKP Q  ER+RI+ AGGF+ + G+WRV G+LA+SR+ GD  LK    V+ DP+I    +D    EF+ILASDGLWD  +NEEAV  IK  + +P   AK ++ +++ RG  DN+T +VV
Sbjct:  177 DREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKDRLDEPHFGAKSIVLQSFYRGCPDNITVMVV 349          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.085e-32
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 3
Query:   24 NLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            +L  NL+R   F  D   A+  A+  TD  F++    ++   G+T       G+ L VA  GDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG V+W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DN+T +VV
Sbjct:  284 HLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 483          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 9.085e-32
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 3
Query:   24 NLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            +L  NL+R   F  D   A+  A+  TD  F++    ++   G+T       G+ L VA  GDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG V+W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DN+T +VV
Sbjct:  284 HLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 483          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.186e-31
Identity = 75/200 (37.50%), Postives = 112/200 (56.00%), Query Frame = 3
Query:   24 NLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-----KPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            +L  NL+R   F  D   A+  A+  TD  F++    ++   G+T       G+ L VA  GDS+ ++ R G A+ + + HKPD+ DE+QRIE  GG ++W G WRV G L+VSRA GD   K Y+  D +    V+D + ++LILA DG +D V  +EAV ++     +   D    A +L+  A   GS+DN+T +VV
Sbjct:  298 HLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVV 497          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 4.509e-31
Identity = 85/212 (40.09%), Postives = 127/212 (59.91%), Query Frame = 3
Query:    3 AADLLKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY------VVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            AA   K N+   ++    F + TK A   A+  TD   L   ++ +R +G+TA TA+ +   +L+AN GDSRAV+ + G AI +S+DHKP+ T ER RIE  GG V++ G   + G L+V+RA GD  +K        +  +PE++E V+    E+LI+  DGLWDV++++ AV M++       DPE  ++ L++EA QR S DNLT VVV
Sbjct:  118 AASFTKKNIMKLVMEDKHFPTSTKKATRSAFVKTDHA-LADASSLDRSSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGG-VIYDG--YLNGQLSVARALGDWHIKGTKGSLCPLSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPERCSQALVKEALQRNSCDNLTVVVV 325          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 4.509e-31
Identity = 78/190 (41.05%), Postives = 115/190 (60.53%), Query Frame = 3
Query:   78 AIADAYSHTDSEFLKSENNQNRDA----------GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW-AGTWRVGGV-LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            A++ A+  TD  F + E + +R +          G TA  ++ V ++L VAN GDSRA++CR G+  A+S+ H     DER R+   GG + W   TWRV    L V+R+ GD  LK  V A+PEI E ++ +  EFL++ASDGLWDV+ +EE + +I+  +++P   +KRL  EA  RGS DN+T +VV
Sbjct:  458 ALSQAFVRTDLAF-RQELDSHRQSKRVSQKDWHPGCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLKPAVTAEPEISETILSADDEFLVMASDGLWDVMNDEEVIGIIRDTVKEPSMCSKRLATEAAARGSGDNITVIVV 646          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.888e-31
Identity = 85/196 (43.37%), Postives = 117/196 (59.69%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSE--NNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-------PIQDPE--------EAAKRLMQEAYQRGSADNLTCVVV 608
            K A+A  ++  D E   +E  +   +  GSTA  A+    R++VAN GDSRAV+ RGG A+ +S DHKPD+ DE +R+E AGG V+    +R+ GVLA SR+ GD  LK YV+A+PE+         EFLILASDGLWDVV+N+ A  + +         + PE        +AA  L++ A  RGS DN++ VVV
Sbjct:  191 KEAMAACFTRVDGEVGGAEEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIARNCLSGRAASKYPESVSGSTAADAAALLVELAISRGSKDNISVVVV 386          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.713e-30
Identity = 77/196 (39.29%), Postives = 117/196 (59.69%), Query Frame = 3
Query:    3 AADLLKHNLFS---NLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV-MWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRG 578
            AA+ +  NL      ++ + K   +   A   A+  TD +FL+    +   +G+   TA+     ++V+N GD RAV+CR G A A++ DHKP + DE++RIE  GG+V    G WRV G+LAVSR+ GD  LK++VVA+PE +   ++  +EFL+LASDGLWDVV+N+EAV  +  +    +  K   +E   +G
Sbjct:  163 AAEFVAENLHKYVVEMMENCKGKEEKVEAFKAAFLRTDRDFLE----KGVVSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAVYTVLHVLAQRKTPKESEEENLVQG 354          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.238e-30
Identity = 80/187 (42.78%), Postives = 108/187 (57.75%), Query Frame = 3
Query:  117 LKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK--------------PIQDPEE---------AAKRLMQEAYQRGSADNLTCVVV 608
            ++SE     + GSTA  A+     ++VAN GDSR V+CRG   +A+S DHKPD+ DER RIE  GG V+    +RV G+LA+SR+ GDR LK +V+  PE+         + LILASDGLWDVV+NEEA  + +              P+ D  E         AA  LM+ A ++GS DN+T +VV
Sbjct:  189 VRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVARRQILLWHKNNGAASPLSDEGEGSTDPAAQAAADYLMRLALKKGSEDNITVIVV 375          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.985e-30
Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 3
Query:   54 KFISDTK--SAIADAYSHTDSEFL---------KSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA-GTWRVGGV-LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK-PIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            +F S+T    A+ +A+  TD  F          K    +N   G TA TA+ V ++L VAN GD RA++ R G    ++RDH      ER+RI   G  V W   TWRVG   L V+R+ GD  LK  V A PE+ E ++    EFL++ASDGLWDV++NE+ +++IK  +++P   +KRL  EA  RGS DN+T +VV
Sbjct:  447 QFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVV 645          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PPM1L_BOVIN2.391e-3246.82Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
PPM1E_RAT9.085e-3238.00Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE9.085e-3238.00Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1E_HUMAN1.186e-3137.50Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
P2C47_ARATH4.509e-3140.09Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C31_ARATH4.509e-3141.05Protein kinase and PP2C-like domain-containing pro... [more]
P2C08_ORYSJ5.888e-3143.37Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C14_ARATH1.713e-3039.29Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C50_ORYSJ2.238e-3042.78Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C04_ORYSJ4.985e-3041.21Protein kinase and PP2C-like domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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