DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9297 contig Ccv1_Contig9297:1..1222. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.450e-29
Identity = 87/205 (42.44%), Postives = 117/205 (57.07%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKS-----------ENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQD-------PE--------EAAKRLMQEAYQRGSADNLTCVVV 608
            K A+  +++  D E + S           E +  R  GSTA  A+    R++VAN GDSRAV+ RGG A+ +S DHKPD+ DE +R+E AGG V+    +RV GVLA SR+ GD  LK +V A+PE++        EFLILASDGLWDVV+NE A  + +   +       PE        +AA  L + A  RGS DN++ VVV
Sbjct:  167 KEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCLNGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVV 371          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.894e-29
Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK 518
            GSTA  ++   ++++VAN GDSRAV+CR G A+ +S DHKPD+ DE  RI++AGG V++    RV GVLA+SRA GD  LK YV ++PE+         EFLILA+DGLWDVVTNE A  M++
Sbjct:  233 GSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACTMVR 355          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 2.474e-29
Identity = 69/200 (34.50%), Postives = 112/200 (56.00%), Query Frame = 3
Query:   24 NLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEE-----AAKRLMQEAYQRGSADNLTCVVV 608
            ++ +N  R P+  +D + A+ +A+  TD  FL+    +   +G+T   A+  G  L VA  GDS+ ++ + G  + +   H+P++ DE+ RIE  GGFV     WRV G LAVSRA GD   K YV  + +     +  S ++L+LA DG +DVV ++E V +++     ++      A+ L+  A +RGS DN+T +VV
Sbjct:  212 HVHTNAARQPELPTDPEGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQGSGLRVAEELVAAARERGSHDNITVMVV 411          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.474e-29
Identity = 76/194 (39.18%), Postives = 119/194 (61.34%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            ++ + ++++ +A+   D   L  + + +   G+TA TA+  G  L+VAN GD RAV+CR G AI +S DHKP    ER+R+E++GGF+   G   +  VLAV+RA GD  LK        ++++PEI++  +    EFL++  DG+WDV+T++EAV++++       DP   A+ L+ EA  R S DNLT VVV
Sbjct:  157 YVEEVETSLRNAFLQADLA-LAEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDG--YLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEALGRNSFDNLTAVVV 347          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.511e-29
Identity = 85/193 (44.04%), Postives = 109/193 (56.48%), Query Frame = 3
Query:   66 DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVI-CRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM--WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVI--DSSLEFLILASDGLWDVVTNEEAV-------AMIKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            D  +AI  AY  TDSEFL    +Q    G+ A+TA+     L V+N GD RAV+  RGG A A++ DH P + DER RIE  GG+V    +G WRV   LAVSRAFGD  +KQ+V  +PE     +  D    FL+LASDGLW  V+N+EAV       A    +    +  K L   A  RGS D++T +VV
Sbjct:  225 DVTAAIRAAYLTTDSEFL----SQGVRGGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAVDAVAAAAAAAAGVAGSTDPCKELAAMARSRGSRDDITVMVV 413          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 5.511e-29
Identity = 82/175 (46.86%), Postives = 105/175 (60.00%), Query Frame = 3
Query:  105 DSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI------QDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            +S   + E  +    GSTA  A+    R++VAN GDSRAV+CRGG  + +S DHKPD+ DE +RIE AGG  + W G  RV GVLA+SR+ GD  LK YV A PE+         E LILASDGLWDVV+NE A  + +        +   EAA  L + A  R S+DN++ VVV
Sbjct:  177 ESGSCRCEGQKCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGA-RVLGVLAMSRSIGDAYLKPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNEAACEVAQSCLRRGRQRWCAEAAAVLTKLALARRSSDNISVVVV 350          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 7.198e-29
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----------------------------------PIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            GSTA  ++   ++++VAN GDSRAV+CR G AIA+S DHKPD+ DE  RI+ AGG V++    RV GVLA+SRA GD  LK YV++ PE+      +  +FLILASDGLWDVV+NE A ++++                                  P +  EEA+  L + A  R S+DN++ VVV
Sbjct:  221 GSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISRPEVTVTDRANGDDFLILASDGLWDVVSNETACSVVRMCLRGKVNGQVSSSPEREMTGVGAGNVVVGGGDLPDKACEEASLLLTRLALARQSSDNVSVVVV 407          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 7.198e-29
Identity = 86/207 (41.55%), Postives = 113/207 (54.59%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI-------------------------KPIQDPE--EAAKRLMQEAYQRGSADNLTCVVV 608
            K A+ +++   DSE    E+      GST+  A+     + VAN GDSRAV+CRG  A+ +S DHKPD+ DE  RIE AGG  + W G  RV GVLA+SR+ GDR LK  ++ DPE+         + LILASDG+WDV+T+EEA  M                          K  +DP    AA+ L + A QRGS DN++ VVV
Sbjct:  218 KKALFNSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVV 420          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 9.401e-29
Identity = 72/203 (35.47%), Postives = 124/203 (61.08%), Query Frame = 3
Query:   57 FISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSADNLTCVVVPVLANQGGP 635
            ++   ++++  A+   D   L  + + +R +G+TA TA+  G +LLVAN GD RAV+CR G A+ +SRDH+ +  +E +R+  +GG++       + GVL+V+RA GD  +K        ++A+PE ++ ++    EFLI+  DG+WDV+T++ AV+++    +   DPE  A+ L+ EA +  +ADNLT +VV  ++  G P
Sbjct:  155 YVQSVENSVRRAFLQADLA-LADDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYI---EDGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDDPERCARELVMEAKRLETADNLTVIVVCFVSELGSP 353          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.228e-28
Identity = 85/206 (41.26%), Postives = 115/206 (55.83%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI------------------------QDPE--EAAKRLMQEAYQRGSADNLTCVVV 608
            K A+ +++   DSE +++  +     GST+  A+     + VAN GDSRAV+CRG   +A+S DHKPD+ DE  RIE AGG V+ W G  RV GVLA+SR+ GDR LK  V+ DPE+         + LILASDGLWDV+TNEE   + +                          +DP    AA+ L + A Q+GS DN++ VVV
Sbjct:  206 KKALFNSFMRVDSE-IETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGA-RVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVV 409          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C51_ORYSJ1.450e-2942.44Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C03_ARATH1.894e-2953.66Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
PPM1F_HUMAN2.474e-2934.50Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
P2C49_ARATH2.474e-2939.18Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C77_ORYSJ5.511e-2944.04Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C68_ORYSJ5.511e-2946.86Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C78_ARATH7.198e-2942.25Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C56_ARATH7.198e-2941.55Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C47_ORYSJ9.401e-2935.47Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C77_ARATH1.228e-2841.26Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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