DY306884

Overview
NameDY306884
Unique NameDY306884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1222
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9297 contig Ccv1_Contig9297:1..1222. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 3.581e-20
Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQE---AYQRGSADNLTCVVV 608
            GSTA   I  G++++V N GDSR V+ + G AI++S DHKP    ER+RI+ AGG V      R+ G+LA SRA GD   K         Q V   P+I+ E I    EFL++ASDG+WD + N   V  ++    P E   R   E    +   S DN T ++V
Sbjct:  142 GSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVF---LQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSNDNATAILV 303          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.677e-20
Identity = 63/189 (33.33%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  117 LKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNLTCVVV 608
            ++ +     D+G+TA  A+  G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E V  I  K  Q  E    RL+    +                  DN+TC+++
Sbjct:  317 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIII 503          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 4.677e-20
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 3
Query:  117 LKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI--KPIQDPEEAAKRLMQEAYQR--------------GSADNLTCVVVPVLANQGGPPFP 644
            ++ +     D+G+TA  A+  G +L+VAN GDSR V+   G A+ +S DHKP+   E  RI++AGG V   G  RV G L +SRA GD   K         Q + A P+I+   +    EF+++A DG+W+V++++E +  I  K  Q  E    RL+    +                  DN+TC+++         P P
Sbjct:  315 MEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKPRNTAAPQP 513          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.977e-20
Identity = 67/195 (34.36%), Postives = 98/195 (50.26%), Query Frame = 3
Query:  102 TDSEFLKSEN-------NQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA----------DNLTCVVV 608
            TD + + ++N          +D+G TA   +  G  L VAN GDSR VI R G AI +S DHKP+  +E  RI  AGG V   G  RV G L +SRA GD   K         Q + A P+I++ +I    EF++LA DG+W+ +++EE V  ++      +    + +E +    A          DN+T V+V
Sbjct:  370 TDEDQMANDNFCANMIEEPGKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDG--RVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFVRCRLKDNKKLSTICEELFDNCLAPNTMGDGTGCDNMTAVIV 562          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 7.977e-20
Identity = 70/199 (35.18%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            + + K+ I   +   D     F    N  +R +GSTA   +     +   N GDSRAV+ R G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF+ILA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V
Sbjct:   99 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLV 293          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.977e-20
Identity = 66/185 (35.68%), Postives = 97/185 (52.43%), Query Frame = 3
Query:  150 GSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------RLL---KQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSA---------DNLTCVVV----PVLANQGGPP 638
            GSTA  AI    +L+VAN GDSR VI R G A  +SRDHKP+   ER+RI  AGG++      RV G + +SRA GD      + L   KQ + A+P+I    +    +FL+LA DG+WD +++++ V  I    + E +   + +    R  A         DN+T ++V    P+  N+   P
Sbjct:  160 GSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMG---RVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQFKKPISQNKNVSP 341          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.042e-19
Identity = 70/199 (35.18%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   60 ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            + + K+ I   +   D     F    N  +R +GSTA   +     +   N GDSRAV+ R G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF+ILA DG+WDV++NEE    +K       D E     ++     +GS DN++ V+V
Sbjct:   99 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLV 293          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.361e-19
Identity = 72/219 (32.88%), Postives = 111/219 (50.68%), Query Frame = 3
Query:   12 LLKHNLFSNLIRHPKFIS-DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVICRGG-----------NAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQ----YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAM----IKPIQDPEEAAKRLMQEAYQRGSADNLTCVVV 608
            LL+  + + L+    F   D + A  DAY+  D   ++    +   +GST  +A+ VG++L  AN GDS  V+ R               + +S  H      E++R+ D GG +++    R+ G LAVSR+FGD+  K+    + V+DP      + +   F ILA DGLWD V  +EAV      IK  +   E ++ L Q++Y RGS DN+T +VV
Sbjct:  759 LLEPTVHNCLVNSQSFRDGDYEQAFRDAYAEADDIVIE----KCEKSGSTGVSALLVGNKLYTANVGDSEIVLARAQPNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFN---RLFGSLAVSRSFGDKEYKEGEKKFCVSDPYQTTTDLTARDHFFILACDGLWDKVEYDEAVQFVQRNIKLGKSATEISELLAQDSYDRGSGDNITVLVV 970          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.777e-19
Identity = 59/172 (34.30%), Postives = 100/172 (58.14%), Query Frame = 3
Query:  147 AGSTASTAIPVGDRLLVANEGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----KPIQDPEEAAKRLMQEAYQRGSA-----DNLTCVVV 608
            AG TA+ A+ VG  L VAN GDSR+ + R G    +S+DHKPD   E++RIE AGGFV      RV G L++SRA GD   K         Q + A P+++   + ++ +FL++  DG+++   +++ +  I    K  Q+ ++AA++L+ +   + ++     DN+TC+++
Sbjct:  124 AGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFV---SDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINSELKNTQNLQKAAEKLLDQLLAKDTSLGTGCDNMTCILI 292          
BLAST of DY306884 vs. ExPASy Swiss-Prot
Match: P2C51_ARATH (Probable protein phosphatase 2C 51 OS=Arabidopsis thaliana GN=At3g63340 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.777e-19
Identity = 70/242 (28.93%), Postives = 121/242 (50.00%), Query Frame = 3
Query:   72 KSAIADAYSHTDSEFLKSENNQNRDAGSTASTAIPVGDRLLVANEGDSRAVIC------------------------RG-------------GNAIA------VSRDHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIQE-EVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEA------------AKRLMQEAYQRGSADNLTCVVVPVLAN 623
            K A+  A    D  F K  +N+  ++GSTA+ A+    +L+VA+ GDS+A++C                        RG             GN +       +++DH P++ DE+ R+E AGG+V  WAG  RV G L VSRA GD   + Y V++ PE+ + + + ++  FL+++SDG+++ +  +E   ++  + +   +            A  L+  A+++GS DN+  VVVP+ +N
Sbjct:  207 KEALLRAIHDIDVTFTKEASNRKLNSGSTATIALIADGQLMVASIGDSKALLCSEKFETLEEARATLVKLYRERRRNRGSSPSRFSDFKLEHGNGLLRFIAKELTKDHHPNREDEKIRVEAAGGYVTEWAGVPRVNGQLTVSRAIGDLTYRSYGVISAPEVMDWQPLVANDSFLVVSSDGIFEKLEVQEVCDLLWEVNNQTSSGAGVPSYCSISLADCLVNTAFEKGSMDNMAAVVVPLKSN 448          
The following BLAST results are available for this feature:
BLAST of DY306884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
P2C21_ORYSJ3.581e-2039.39Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PPM1G_HUMAN4.677e-2033.33Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN4.677e-2031.84Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
Y0417_DROME7.977e-2034.36Probable protein phosphatase CG10417 OS=Drosophila... [more]
PPM1B_BOVIN7.977e-2035.18Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
P2C58_ORYSJ7.977e-2035.68Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
PPM1B_HUMAN1.042e-1935.18Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
SPNA_DICDI1.361e-1932.88Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
PP2C6_PARTE1.777e-1934.30Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
P2C51_ARATH1.777e-1928.93Probable protein phosphatase 2C 51 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI3CD01FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306884 ID=DY306884; Name=DY306884; organism=Citrus clementina; type=EST; length=1222bp
GAGCTGCTGACCTTTTAAAACACAACCTCTTCAGCAATCTGATCAGGCAT
CCAAAGTTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCA
CACAGACTCGGAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTG
GATCTACTGCTTCCACTGCCATCCCTGTTGGTGATCGCTTACTTGTTGCA
AATGAGGGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGC
CGTATCGCGAGATCACAAACCAGACCAAACAGATGAGCGTCAACGGATTG
AGGATGCAGGAGGGTTTGTGATGTGGGCTGGAACTTGGAGAGTGGGAGGA
GTGCTTGCCGTTTCTCGCGCATTTGGTGACAGACTCTTGAAGCAGTATGT
TGTTGCTGATCCCGAAATTCAGGAGGAAGTTATTGACAGCTCCCTTGAGT
TTCTTATCCTTGCAAGTGATGGACTTTGGGATGTCGTCACAAATGAGGAA
GCTGTTGCGATGATCAAACCAATCCAGGATCCAGAGGAGGCAGCGAAGAG
GCTGATGCAGGAGGCATATCAGAGAGGCAGCGCAGACAACCTCACCTGTG
TCGTTGTTCCGGTCTTGGCCAATCAAGGTGGTCCACCCTTTCCCGGGCCC
GCATGAACATCCCTTCATAGCCACCGCTCTGCTTTTGTTCTCCACATCGG
GCACCCTTTCAGGGGGCCACAGGCTAGTAACCCTAGAAAAAATACAGTTC
CCTTGGACTTCTGAAATGAAAACAACCGCACCAAAAACCCTCCCCCCCGG
CGGTAAAGGGGTATAACCAAATAACCACCCTCTGGAAAAAAACGGGCCCG
CAAGTTAACATCCTCGTCCCCGCCCCCCCAAACGAACCCTAAAAGCGGGA
TGGAACCGCTGCTGTAAAAAAATGGGAAAGAACCTCCCCAAGATTGCATT
CACAAAACACAAAAAAAAAAAAACAACCCCAACATCCCTCTGCCCCACCG
CGGCCCAACCACCAACGCCCTCGCTCAAACTCTCTCTACGGGCCCCGACC
ACGCCGACCCTTCTCCCACCCAACAATACCCCTCTAGACACAACACCCCC
GCCCCACAAATTTCCTCTCAAGCCCCACAACGCACACCACCACCCCGCGG
ACGCCTCTGCCTCGGGCTCACTGCGCCCGCCCAGCACACGCCGCCCCCGG
TACGGTTCACCACTACCAAACA
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