EG026373

Overview
NameEG026373
Unique NameEG026373
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length603
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.495e-31
Identity = 70/180 (38.89%), Postives = 112/180 (62.22%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDXXXXXXXXXXXXVVDFTSHVDLSTDPGHYVIFWEV---SGEVNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFS 529
            GLYRYR+GDV++V GF N  P   F+ R+N+ L+++ DK  E +L  +V             +V++TS+ D +T PGHYV+FWE+   S  V   V +ECC  ++ + +++ Y   R  + +IGPLE+RVV +GTF +++D+ +  GA+++Q+K PRCV P    V+++L   +   YFS
Sbjct:  409 GLYRYRVGDVLRVAGFKNKAPMFSFVRRQNVALSVDSDKTDETELHAAVSGAVQHLAPFGASLVEYTSYADAATIPGHYVLFWELRAGSTAVPASVFEECCLSVEEA-LNSVYRQGRACDRSIGPLEIRVVAEGTFDKLMDYAISRGASINQYKAPRCVRP--GPVVELLDARVQGKYFS 585          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH317_ARATH (Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30
Identity = 75/192 (39.06%), Postives = 118/192 (61.46%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDXXXXXXXXXXXXVV--DFTSHVDLSTDPGHYVIFWEVS-------GEVNDEVLKECC----NCLDRSFVDAGYVSARKVN---AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFS 529
            GLYRYR+GD++KV GFHN  P+ +F+ RRN++L+I+ DK +E+DL  +V             ++  ++TS+ D S+ PGHYV+FWE+         +++D+ +++CC    +CLD       YV  R  N   +IGPLE+RVV  GTF  ++D  +  G++L+Q+KTPRCV   +   L+IL + +   +FS
Sbjct:  414 GLYRYRVGDILKVTGFHNKAPQFRFVQRRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQHPSSLLLTEYTSYADTSSIPGHYVLFWELKPRHSNDPPKLDDKTMEDCCSEVEDCLD-------YVYRRCRNRDKSIGPLEIRVVSLGTFDSLMDFCVSQGSSLNQYKTPRCV--KSGGALEILDSRVIGRFFS 596          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.088e-30
Identity = 69/184 (37.50%), Postives = 111/184 (60.33%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDXXXXXXXXXXXXVVDFTSHVDLSTDPGHYVIFWEV------SGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTA 535
            GL RYR+GDV++V GFHN+ P+ +F+ R+N+LL+I  DK  E +LQ +V+            VV++TS       PGHYVI+WE+      +  V+ + L  CC  ++ +       S     +IGPLE+RVV  GTF++++D+ +  GA+++Q+K PRCV  T   ++++L + +  S+FS A
Sbjct:  413 GLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCV--TFPPIVELLDSRVVSSHFSPA 594          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.088e-30
Identity = 69/184 (37.50%), Postives = 111/184 (60.33%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDXXXXXXXXXXXXVVDFTSHVDLSTDPGHYVIFWEV------SGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTA 535
            GL RYR+GDV++V GFHN+ P+ +F+ R+N+LL+I  DK  E +LQ +V+            VV++TS       PGHYVI+WE+      +  V+ + L  CC  ++ +       S     +IGPLE+RVV  GTF++++D+ +  GA+++Q+K PRCV  T   ++++L + +  S+FS A
Sbjct:  413 GLNRYRVGDVLRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKRIPGHYVIYWELLTKGAGATVVDADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCV--TFPPIVELLDSRVVSSHFSPA 594          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.354e-29
Identity = 70/183 (38.25%), Postives = 111/183 (60.66%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDXXXXXXXXXXXXVVDFTSHVDLSTD-PGHYVIFWEVSG-----EVNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFS 529
            GLYRYR+GDV++V GF N+ P   F+ R+N+ L+I+ DK  E +L  +V             +V++TS+ D +T  PGHYV+FWE+        V   V ++CC  ++   +++ Y   R  + +IGPLE+RVV  GTF +++D+ L  GA+++Q+K PRCV P    V+++L   +  +YFS
Sbjct:  417 GLYRYRVGDVLRVAGFKNAAPMFAFVRRKNVALSIDSDKTDEAELHAAVTEAVQHLAPFGASLVEYTSYADTATTIPGHYVLFWELRSPAGGTPVPASVFEDCCLAVEEG-LNSVYRQCRAADRSIGPLEIRVVADGTFDKLMDYALSRGASINQYKAPRCVRP--GPVVELLDGRVQATYFS 596          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH39_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.9 OS=Oryza sativa subsp. japonica GN=GH3.9 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.389e-26
Identity = 66/190 (34.74%), Postives = 111/190 (58.42%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVD-XXXXXXXXXXXXVVDFTSHVDLSTDPGHYVIFWEVSGE----------VNDEVLKECCNCLDRSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTA 535
            GL RYR+GDV++V GFHN+ P+ +F+ R+++LL++ +DK  E +L  +V+             V ++TS       PGHYV++WE+  E          V+ E L  CC  ++ + + A Y   R  + +IGPLE+R+V  GTF++++D  +  G ++ Q+K P+CV  T  +V+++L + +  S FS A
Sbjct:  244 GLSRYRVGDVLRVTGFHNAAPQFRFVRRQSVLLSVELDKTDEAELHRAVERASSALLRPRGVSVAEYTSRACTERIPGHYVVYWELLTESPVGAGDGDTVDGETLGRCCLEMEEA-LSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCV--TVPSVVELLDSRVVSSQFSPA 430          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH37_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.7 OS=Oryza sativa subsp. japonica GN=GH3.7 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.229e-23
Identity = 58/187 (31.02%), Postives = 105/187 (56.15%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSV-DXXXXXXXXXXXXVVDFTSHVDLSTDPGHYVIFWEVSG--------EVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTA 535
            GLYRYR+GD+  V GF+N+TP   F  R +++L+I+ +K +E+DL  ++ +            +V  T++ D+ST PGHY++FWE++         +++   +++CC  ++  F D  Y   R   +I  LE+R++  G F  ++D ++  G + SQ+KTP  +   +K  + +L   +   +FS A
Sbjct:  425 GLYRYRVGDLFTVSGFYNATPLFHFSGRHDVILSIDYEKISEEDLLNAIAETDKFHLRPLGYMLVGSTAYADISTLPGHYILFWELTNTCDSNVAIDIDQTAMEKCCLAVEDHF-DEMYRKIRHRGSISALEIRILSHGAFDALMDFFVSRGTSASQYKTPTAI--RSKEAMMVLEERVVGRFFSQA 608          
BLAST of EG026373 vs. ExPASy Swiss-Prot
Match: GH32_ARATH (Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.314e-21
Identity = 50/128 (39.06%), Postives = 77/128 (60.16%), Query Frame = 2
Query:    2 GLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDXXXXXXXXXXXXVVDFTSHVDLSTDPGHYVIFWEVSGE------VNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPL 367
            GLYRYR+GD+++V GFHNS P+ KFI R+N+LL++  DK  E +LQ +V+             +++TS+ +  T PGHYVI+WE+ G       +++EV+ +CC  ++ S       S     +IGPL
Sbjct:  412 GLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSVESDKTDEAELQKAVENASRLFAEQGTRGIEYTSYAETKTIPGHYVIYWELLGRDQSNALMSEEVMAKCCLEMEESLNSVYRQSRVADKSIGPL 539          
The following BLAST results are available for this feature:
BLAST of EG026373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GH31_ORYSJ5.495e-3138.89Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH317_ARATH1.224e-3039.06Indole-3-acetic acid-amido synthetase GH3.17 OS=Ar... [more]
GH38_ORYSJ2.088e-3037.50Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH38_ORYSI2.088e-3037.50Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH34_ORYSJ1.354e-2938.25Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH39_ORYSJ2.389e-2634.74Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH37_ORYSJ3.229e-2331.02Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH32_ARATH2.314e-2139.06Indole-3-acetic acid-amido synthetase GH3.2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DB03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026373 ID=EG026373; Name=EG026373; organism=Citrus clementina; type=EST; length=603bp
AGGTTTGTATCGGTACCGGCTAGGGGATGTGGTGAAGGTTATGGGCTTCC
ATAATTCAACCCCAGAACTCAAATTTATTTGCAGGAGGAACCTATTGCTA
ACCATAAACATTGACAAGAACACTGAGAAGGATTTGCAGCTATCTGTCGA
CGAAGCTGCCCAGCTTTTAGCTGAAGAAAAACAAGAAGTAGTTGACTTTA
CGAGTCATGTTGATTTGTCAACAGATCCTGGTCACTATGTGATCTTCTGG
GAAGTCAGTGGTGAAGTCAATGACGAGGTCTTGAAAGAATGCTGCAATTG
TTTGGATCGTTCCTTTGTCGACGCAGGTTATGTCAGTGCACGCAAGGTCA
ATGCCATAGGGCCGCTCGAACTCCGAGTTGTTTTGAAGGGCACCTTCCAA
CAGATTTTAGATCATTACCTTGGATTGGGAGCTGCTCTTAGTCAGTTTAA
AACCCCTAGGTGCGTTGGACCTACCAACAAGACTGTGTTGCAAATCTTAT
GTAATAACATTGGTAAGAGCTACTTTAGTACTGCTTACGGGTAATTGTAA
GAAACTTGCAAATCTGATCATCTTTTTATAGGTATTGAAATCTTTTCTGG
GTC
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